FFCP PHASE1:Hg19::chr15:52030228..52030241,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=256586 | |EntrezGene=256586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28571 | |HGNC=28571 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=76bp_to_ENST00000560491_5end | |association_with_transcript=76bp_to_ENST00000560491_5end | ||
|cluster_id=chr15:52030228..52030241,- | |||
|description=CAGE_peak_4_at_LYSMD2_5end | |description=CAGE_peak_4_at_LYSMD2_5end | ||
|id=chr15:52030228..52030241,- | |id=chr15:52030228..52030241,- | ||
|ontology_enrichment_celltype=CL:0002087!1.22e-07!119;CL:0000860!1.23e-07!45 | |ontology_enrichment_celltype=CL:0002087!1.22e-07!119;CL:0000860!1.23e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.61e-12;3!CL:0000167;1.20e-09;1!CL:0000164;1.20e-09;1!CL:0000502;1.20e-09;1!CL:0000172;1.20e-09;1!CL:0002553;1.20e-09;1!CL:0000173;1.20e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.37e-12,3;CL:0000825,3.37e-12,3;CL:0000167,6.31e-10,1;CL:0000164,6.31e-10,1;CL:0000502,6.31e-10,1;CL:0000172,6.31e-10,1;CL:0000173,6.31e-10,1;CL:0002351,6.31e-10,1;CL:0002553,8.17e-10,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.20e-09;1!UBERON:0006242;1.20e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;1.20e-09;1!DOID:0050177;1.20e-09;1!DOID:0050427;1.20e-09;1!DOID:4430;1.20e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,6.31e-10,1;DOID:630,1.62e-09,1;DOID:0050177,1.62e-09,1;DOID:0050427,1.62e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-17!115;UBERON:0001049!1.03e-11!57;UBERON:0005068!1.03e-11!57;UBERON:0006241!1.03e-11!57;UBERON:0007135!1.03e-11!57;UBERON:0005743!1.26e-11!86;UBERON:0001017!1.55e-11!82;UBERON:0000073!2.46e-10!94;UBERON:0001016!2.46e-10!94;UBERON:0000955!1.33e-09!69;UBERON:0006238!1.33e-09!69;UBERON:0002616!4.50e-09!59;UBERON:0003075!9.65e-09!86;UBERON:0007284!9.65e-09!86;UBERON:0002780!1.21e-08!41;UBERON:0001890!1.21e-08!41;UBERON:0006240!1.21e-08!41;UBERON:0003080!2.95e-08!42;UBERON:0002346!8.11e-08!90;UBERON:0001893!2.51e-07!34;UBERON:0002020!2.58e-07!34;UBERON:0003528!2.58e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.45e-17;2!UBERON:0002757;1.45e-17;2!UBERON:0010134;1.45e-17;2!UBERON:0005408;1.45e-17;2!UBERON:0001899;1.45e-17;2!UBERON:0003296;3.03e-09;4!UBERON:0010133;3.03e-09;4!UBERON:0002784;3.03e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.04e-17,2;UBERON:0002757,1.04e-17,2;UBERON:0010134,1.04e-17,2;UBERON:0005408,1.04e-17,2;UBERON:0001899,1.04e-17,2;UBERON:0003296,2.57e-09,4;UBERON:0010133,2.57e-09,4;UBERON:0002784,2.57e-09,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0.464448369948228,0,0,0,0.0774672005803016,0,0,0.553995408531877,2.00544447470142,0.868043482863407,0.223915474239924,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0.512321413058201,0,0,0,0,0.564727018627814,0,0.449446968890169,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,1.13477044938228,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0,0.209658645508376,0.22465726229299,0,0,0.285012743741249,0.39783335439818,0.182664153764634,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0.587237189370939,0,0,0.560508562981536,0,0.393419540227666,0.786021525498329,0.411202997999018,0,0,0.473447805734733,0,0,0.589211814949674,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0.535081656179426,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.604820229674197,1.87208137048455,0.868946423296794,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0.087834785693126,0.392937226493138,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0.492434012174795,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0.591092280605782,2.80315847317372,1.15508732651774,0.254094624222463,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2942852049117,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0.229723400206959,0,0,0.569647187174163,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0,0,0.280797178113459,0,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0.16480387422676,0,0,0.276283915531148,0.755798243562828,0,0.246169610922139,0,0.179736702294654,0.537063524026827,0,0.0986434056369336,0,0,1.93866549219044,0.834912883456661,1.99613798001194,0.260427761085233,0,0,0.455173793141999,0,0.236387681767936,0.689486746482929,0,0.173624994933292,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0.87754158861589,0.21787692703798,0.139423744278603,0.153900517007594,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0.247127877893006,0.626531697032732,0.471807930864739,0,0.468528891450678,0,0.19566461893209,0.242780379534093,0.394584402849391,1.20990716048664,0,0.189559738885464,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0.34945333648406,0,0.387025325156341,0.0730893170861856,0.246346371159628,0.0969890164884194,0,0.225980740780532,0,0,0.886351143382302,0,0.160317640503067,1.49417096317547,0,0.144090417154106,0,1.02956998717179,0.288109595976299,0.124252535565433,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.885847333632739,0.592713324460491,0,0.544813624446302,0.321506296930038,0.137539436597234,0,0,0,0.728994679896296,0,0.394028536495991,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.58620893471233,0,0.775697738169303,0.52893040697076,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0.250381861413,0,0.221858103073705,0.931446044120752,0,0,0,0,0,1.40500471742064,0.724605143054126,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0.0788617450012534,1.60114149657094,0,0,0.834979926253974,0,0,0.41023272848151,0,0.760729777106397,0.161475645631851,0,0.294443155503077,0.11796972334774,0,0.115525666150338,0,0,0,0.0752103283492573,0,1.56302802246618,0,0,0,0.945526184657525,0.781078098613847,0.206686796501184,1.07806877329642,0,0.548257766857182,0,0,0,1.60710550763486,1.3451348888753,0.606965604236632,0,0,0.460935950223117,0,1.42736439251347,0.526182188502793,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.142953088353313,0.1580136117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| |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0.464448369948228,0,0,0,0.0774672005803016,0,0,0.553995408531877,2.00544447470142,0.868043482863407,0.223915474239924,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0.512321413058201,0,0,0,0,0.564727018627814,0,0.449446968890169,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,1.13477044938228,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0,0.209658645508376,0.22465726229299,0,0,0.285012743741249,0.39783335439818,0.182664153764634,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0.587237189370939,0,0,0.560508562981536,0,0.393419540227666,0.786021525498329,0.411202997999018,0,0,0.473447805734733,0,0,0.589211814949674,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0.535081656179426,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.604820229674197,1.87208137048455,0.868946423296794,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0.087834785693126,0.392937226493138,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0.492434012174795,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0.591092280605782,2.80315847317372,1.15508732651774,0.254094624222463,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2942852049117,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0.229723400206959,0,0,0.569647187174163,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0,0,0.280797178113459,0,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0.16480387422676,0,0,0.276283915531148,0.755798243562828,0,0.246169610922139,0,0.179736702294654,0.537063524026827,0,0.0986434056369336,0,0,1.93866549219044,0.834912883456661,1.99613798001194,0.260427761085233,0,0,0.455173793141999,0,0.236387681767936,0.689486746482929,0,0.173624994933292,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0.87754158861589,0.21787692703798,0.139423744278603,0.153900517007594,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0.247127877893006,0.626531697032732,0.471807930864739,0,0.468528891450678,0,0.19566461893209,0.242780379534093,0.394584402849391,1.20990716048664,0,0.189559738885464,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0.34945333648406,0,0.387025325156341,0.0730893170861856,0.246346371159628,0.0969890164884194,0,0.225980740780532,0,0,0.886351143382302,0,0.160317640503067,1.49417096317547,0,0.144090417154106,0,1.02956998717179,0.288109595976299,0.124252535565433,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.885847333632739,0.592713324460491,0,0.544813624446302,0.321506296930038,0.137539436597234,0,0,0,0.728994679896296,0,0.394028536495991,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.58620893471233,0,0.775697738169303,0.52893040697076,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0.250381861413,0,0.221858103073705,0.931446044120752,0,0,0,0,0,1.40500471742064,0.724605143054126,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0.0788617450012534,1.60114149657094,0,0,0.834979926253974,0,0,0.41023272848151,0,0.760729777106397,0.161475645631851,0,0.294443155503077,0.11796972334774,0,0.115525666150338,0,0,0,0.0752103283492573,0,1.56302802246618,0,0,0,0.945526184657525,0.781078098613847,0.206686796501184,1.07806877329642,0,0.548257766857182,0,0,0,1.60710550763486,1.3451348888753,0.606965604236632,0,0,0.460935950223117,0,1.42736439251347,0.526182188502793,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.142953088353313,0.1580136117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| ||
|short_description=p4@LYSMD2 | |short_description=p4@LYSMD2 | ||
}} | }} |
Latest revision as of 01:17, 18 September 2015
Short description: | p4@LYSMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LYSMD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 76bp_to_ENST00000560491_5end |
EntrezGene: | LYSMD2 |
HGNC: | 28571 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.37e-12 | 3 |
pro-NK cell | 3.37e-12 | 3 |
peptide hormone secreting cell | 6.31e-10 | 1 |
enteroendocrine cell | 6.31e-10 | 1 |
type D enteroendocrine cell | 6.31e-10 | 1 |
somatostatin secreting cell | 6.31e-10 | 1 |
pancreatic D cell | 6.31e-10 | 1 |
progenitor cell of endocrine pancreas | 6.31e-10 | 1 |
lung fibroblast | 8.17e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.04e-17 | 2 |
regional part of epithalamus | 1.04e-17 | 2 |
secretory circumventricular organ | 1.04e-17 | 2 |
circumventricular organ | 1.04e-17 | 2 |
epithalamus | 1.04e-17 | 2 |
gland of diencephalon | 2.57e-09 | 4 |
neuroendocrine gland | 2.57e-09 | 4 |
regional part of diencephalon | 2.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 6.31e-10 | 1 |
genetic disease | 1.62e-09 | 1 |
monogenic disease | 1.62e-09 | 1 |
xeroderma pigmentosum | 1.62e-09 | 1 |