FFCP PHASE1:Hg19::chr1:160162603..160162631,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:160162603..160162631,+ to FFCP PHASE1:Hg19::chr1:160162603..160162631,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=844 | |EntrezGene=844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1512 | |HGNC=1512 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=175bp_to_ENST00000481081_5end | |||
|cluster_id=chr1:160162603..160162631,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_CASQ1_5end | |||
|id=chr1:160162603..160162631,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.18e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;8.72e-11;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.53e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.78e-60!115;UBERON:0001017!1.08e-59!82;UBERON:0005743!5.79e-59!86;UBERON:0001049!7.72e-55!57;UBERON:0005068!7.72e-55!57;UBERON:0006241!7.72e-55!57;UBERON:0007135!7.72e-55!57;UBERON:0000073!4.38e-52!94;UBERON:0001016!4.38e-52!94;UBERON:0002780!1.19e-50!41;UBERON:0001890!1.19e-50!41;UBERON:0006240!1.19e-50!41;UBERON:0002616!9.70e-50!59;UBERON:0003080!3.09e-49!42;UBERON:0001893!4.76e-48!34;UBERON:0001869!9.58e-48!32;UBERON:0002020!2.01e-47!34;UBERON:0003528!2.01e-47!34;UBERON:0002791!8.32e-46!33;UBERON:0000955!2.22e-45!69;UBERON:0006238!2.22e-45!69;UBERON:0003075!1.20e-42!86;UBERON:0007284!1.20e-42!86;UBERON:0002346!3.46e-40!90;UBERON:0001950!5.36e-39!20;UBERON:0002619!5.41e-39!22;UBERON:0000956!3.77e-37!25;UBERON:0000203!3.77e-37!25;UBERON:0003056!1.53e-35!61;UBERON:0000153!2.12e-30!129;UBERON:0007811!2.12e-30!129;UBERON:0004121!2.52e-29!169;UBERON:0000033!2.71e-29!123;UBERON:0000924!2.66e-28!173;UBERON:0006601!2.66e-28!173;UBERON:0000200!1.13e-15!6;UBERON:0001871!1.32e-14!7;UBERON:0001872!8.39e-13!5;UBERON:0002420!4.08e-12!9;UBERON:0007245!4.08e-12!9;UBERON:0010009!4.08e-12!9;UBERON:0010011!4.08e-12!9;UBERON:0000454!4.08e-12!9;UBERON:0002308!1.34e-11!9;UBERON:0000125!1.34e-11!9;UBERON:0000025!2.97e-11!194;UBERON:0000369!6.49e-10!4;UBERON:0002435!6.49e-10!4;UBERON:0000204!6.49e-10!4;UBERON:0010082!6.49e-10!4;UBERON:0004111!2.11e-09!241;UBERON:0002771!1.33e-08!3;UBERON:0000483!2.20e-08!309;UBERON:0000475!2.90e-08!365;UBERON:0009663!2.90e-08!7;UBERON:0000119!3.52e-08!312;UBERON:0002021!3.78e-08!5;UBERON:0000349!4.46e-08!5;UBERON:0003076!5.00e-08!15;UBERON:0003057!5.00e-08!15;UBERON:0000477!9.75e-08!286;UBERON:0005383!1.12e-07!3;UBERON:0005382!1.12e-07!3;UBERON:0000064!1.38e-07!219;UBERON:0000988!3.27e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.89e-70;22!UBERON:0001950;3.91e-69;20!UBERON:0000956;1.09e-61;25!UBERON:0000203;1.09e-61;25!UBERON:0001869;2.00e-58;32!UBERON:0001893;3.91e-54;34!UBERON:0002791;4.33e-52;32!UBERON:0003528;3.97e-48;34!UBERON:0002020;3.97e-48;34!UBERON:0002780;3.10e-36;41!UBERON:0001890;3.10e-36;41!UBERON:0000200;2.08e-32;6!UBERON:0000073;3.72e-24;53!UBERON:0002616;3.72e-24;53!UBERON:0001017;1.66e-19;75!UBERON:0001871;1.09e-18;6!UBERON:0001872;1.07e-17;5!UBERON:0000955;2.63e-17;68!UBERON:0001870;4.13e-17;3!UBERON:0002021;1.96e-16;5!UBERON:0000349;2.66e-16;5!UBERON:0001016;2.38e-13;83!UBERON:0002702;4.89e-12;2!UBERON:0002771;6.23e-12;2!UBERON:0005090;2.17e-11;2!UBERON:0001630;2.17e-11;2!UBERON:0001876;6.26e-11;2!UBERON:0007023;4.30e-10;114!UBERON:0002420;4.03e-09;9!UBERON:0007245;4.03e-09;9!UBERON:0010009;4.03e-09;9!UBERON:0010011;4.03e-09;9!UBERON:0000454;4.03e-09;9!UBERON:0001723;8.47e-08;3!UBERON:0001033;8.47e-08;3!UBERON:0002022;6.06e-07;1!UBERON:0011216;6.33e-07;132!UBERON:0002581;7.35e-07;1!UBERON:0003112;7.35e-07;1!UBERON:0011158;7.35e-07;1!UBERON:0003128;7.35e-07;1!UBERON:0001703;7.35e-07;1!UBERON:0002241;7.35e-07;1!UBERON:0007190;8.91e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.57e-70,22;UBERON:0001950,4.27e-69,20;UBERON:0001869,1.68e-65,32;UBERON:0000956,1.31e-61,25;UBERON:0000203,1.31e-61,25;UBERON:0001893,1.73e-61,34;UBERON:0002791,4.41e-59,32;UBERON:0003528,1.90e-55,34;UBERON:0002020,1.90e-55,34;UBERON:0002780,1.89e-50,41;UBERON:0001890,1.89e-50,41;UBERON:0003080,1.89e-50,41;UBERON:0006240,1.89e-50,41;UBERON:0000073,5.47e-42,53;UBERON:0002616,5.47e-42,53;UBERON:0001017,4.54e-40,81;UBERON:0001049,1.62e-39,56;UBERON:0005068,1.62e-39,56;UBERON:0006241,1.62e-39,56;UBERON:0007135,1.62e-39,56;UBERON:0000955,7.84e-38,68;UBERON:0006238,7.84e-38,68;UBERON:0007023,1.17e-37,114;UBERON:0003056,5.40e-36,61;UBERON:0001016,1.41e-35,89;UBERON:0000200,1.78e-32,6;UBERON:0003075,3.64e-28,82;UBERON:0007284,3.64e-28,82;UBERON:0002346,1.24e-26,86;UBERON:0010371,3.48e-21,104;UBERON:0010314,6.89e-21,132;UBERON:0004121,1.08e-20,171;UBERON:0000924,1.08e-20,171;UBERON:0006601,1.08e-20,171;UBERON:0001871,1.13e-18,6;UBERON:0001872,1.12e-17,5;UBERON:0001870,4.03e-17,3;UBERON:0002021,1.96e-16,5;UBERON:0000349,2.83e-16,5;UBERON:0011216,1.91e-14,223;UBERON:0002702,4.63e-12,2;UBERON:0002771,6.40e-12,2;UBERON:0005090,2.67e-11,2;UBERON:0001630,2.67e-11,2;UBERON:0001876,6.10e-11,2;UBERON:0002420,3.98e-09,9;UBERON:0007245,3.98e-09,9;UBERON:0010009,3.98e-09,9;UBERON:0010011,3.98e-09,9;UBERON:0000454,3.98e-09,9;UBERON:0000025,3.03e-08,192;UBERON:0001723,9.08e-08,3;UBERON:0001033,9.08e-08,3;UBERON:0010056,9.08e-08,3;UBERON:0004111,3.21e-07,240;UBERON:0002022,6.23e-07,1;UBERON:0002581,6.59e-07,1;UBERON:0003112,6.96e-07,1;UBERON:0011158,6.96e-07,1;UBERON:0003128,6.96e-07,1;UBERON:0001703,6.96e-07,1;UBERON:0002241,6.96e-07,1;UBERON:0004761,6.96e-07,1;UBERON:0009617,6.96e-07,1;UBERON:0007190,8.67e-07,1 | |||
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|short_description=p3@CASQ1 | |||
}} | }} |
Latest revision as of 01:14, 18 September 2015
Short description: | p3@CASQ1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CASQ1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 175bp_to_ENST00000481081_5end |
EntrezGene: | CASQ1 |
HGNC: | 1512 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data