FFCP PHASE1:Hg19::chr6:31916882..31916914,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=629 | |EntrezGene=629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1037 | |HGNC=1037 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=107bp_to_ENST00000467150_5end | |association_with_transcript=107bp_to_ENST00000467150_5end | ||
|cluster_id=chr6:31916882..31916914,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_11_at_CFB_5end | |description=CAGE_peak_11_at_CFB_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000860!1.10e-65!45;CL:0002057!3.29e-56!42;CL:0002194!1.81e-47!63;CL:0000576!1.81e-47!63;CL:0000040!1.81e-47!63;CL:0000559!1.81e-47!63;CL:0002009!8.25e-46!65;CL:0000839!4.52e-42!70;CL:0000557!2.19e-41!71;CL:0000766!3.16e-38!76;CL:0002087!1.53e-25!119;CL:0000763!9.56e-24!112;CL:0000049!9.56e-24!112;CL:0002031!8.85e-21!124;CL:0000738!1.30e-20!140;CL:0000037!2.03e-15!172;CL:0000566!2.03e-15!172;CL:0000988!3.58e-14!182;CL:0002032!6.59e-14!165;CL:0000837!6.59e-14!165;CL:0002150!2.24e-12!3;CL:0000861!2.24e-12!3;CL:0000134!4.18e-07!358;CL:0002320!8.17e-07!365 | |ontology_enrichment_celltype=CL:0000860!1.10e-65!45;CL:0002057!3.29e-56!42;CL:0002194!1.81e-47!63;CL:0000576!1.81e-47!63;CL:0000040!1.81e-47!63;CL:0000559!1.81e-47!63;CL:0002009!8.25e-46!65;CL:0000839!4.52e-42!70;CL:0000557!2.19e-41!71;CL:0000766!3.16e-38!76;CL:0002087!1.53e-25!119;CL:0000763!9.56e-24!112;CL:0000049!9.56e-24!112;CL:0002031!8.85e-21!124;CL:0000738!1.30e-20!140;CL:0000037!2.03e-15!172;CL:0000566!2.03e-15!172;CL:0000988!3.58e-14!182;CL:0002032!6.59e-14!165;CL:0000837!6.59e-14!165;CL:0002150!2.24e-12!3;CL:0000861!2.24e-12!3;CL:0000134!4.18e-07!358;CL:0002320!8.17e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.94e-51;33!CL:0002057;7.94e-51;33!CL:0000473;1.97e-36;39!CL:0000234;1.97e-36;39!CL:0000576;4.28e-28;48!CL:0000766;1.51e-23;69!CL:0002087;1.26e-13;104!CL:0000763;3.97e-12;100!CL:0002393;1.32e-09;6!CL:0002397;1.32e-09;6 | |ontology_enrichment_celltype_v019=CL:0000860;7.94e-51;33!CL:0002057;7.94e-51;33!CL:0000473;1.97e-36;39!CL:0000234;1.97e-36;39!CL:0000576;4.28e-28;48!CL:0000766;1.51e-23;69!CL:0002087;1.26e-13;104!CL:0000763;3.97e-12;100!CL:0002393;1.32e-09;6!CL:0002397;1.32e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.46e-60,42;CL:0002057,3.46e-60,42;CL:0000473,1.63e-52,48;CL:0000234,1.63e-52,48;CL:0002194,9.19e-42,59;CL:0000576,9.19e-42,59;CL:0000040,9.19e-42,59;CL:0000559,9.19e-42,59;CL:0002009,2.25e-40,61;CL:0000839,2.89e-37,66;CL:0000557,1.07e-36,67;CL:0000766,4.27e-34,72;CL:0000763,2.21e-22,108;CL:0000049,2.21e-22,108;CL:0002087,6.05e-21,115;CL:0002031,5.10e-20,120;CL:0000738,1.65e-17,136;CL:0002032,1.42e-14,161;CL:0000837,1.42e-14,161;CL:0000037,6.61e-14,168;CL:0000988,4.00e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-40;42 | |ontology_enrichment_development_v019=CL:0002057;1.09e-40;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.58e-36!80;UBERON:0001474!5.35e-33!86;UBERON:0002390!5.16e-31!102;UBERON:0003061!5.16e-31!102;UBERON:0004765!3.01e-29!101;UBERON:0001434!3.01e-29!101;UBERON:0002193!1.35e-27!112;UBERON:0002405!1.03e-24!115;UBERON:0002204!7.01e-15!167;UBERON:0003081!9.69e-12!216;UBERON:0002384!4.98e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!5.58e-36!80;UBERON:0001474!5.35e-33!86;UBERON:0002390!5.16e-31!102;UBERON:0003061!5.16e-31!102;UBERON:0004765!3.01e-29!101;UBERON:0001434!3.01e-29!101;UBERON:0002193!1.35e-27!112;UBERON:0002405!1.03e-24!115;UBERON:0002204!7.01e-15!167;UBERON:0003081!9.69e-12!216;UBERON:0002384!4.98e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.96e-32,76;UBERON:0001474,7.93e-30,82;UBERON:0004765,4.38e-27,90;UBERON:0002405,3.54e-26,93;UBERON:0002390,8.75e-25,98;UBERON:0003061,8.75e-25,98;UBERON:0001434,2.89e-24,100;UBERON:0002193,2.21e-22,108;UBERON:0002204,5.35e-14,167;UBERON:0003081,3.01e-11,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,2.60707781711184,2.17010870715852,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0.575384784644301,0.512321413058201,0.709446689665756,9.65287906062532,7.74581620300591,4.06279459783025,0.188242339542605,0.272906150057846,0.224723484445085,4.28517449319264,4.8139354061414,3.19668562899521,0,0,0,19.1538097494865,11.3477044938228,7.4738669879469,0,0.521482918420201,0.434377689410233,6.05399502633369,18.7821594353658,15.5066569846033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483781656445426,0.146178634172371,0.246346371159628,0,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,2.60707781711184,2.17010870715852,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0.575384784644301,0.512321413058201,0.709446689665756,9.65287906062532,7.74581620300591,4.06279459783025,0.188242339542605,0.272906150057846,0.224723484445085,4.28517449319264,4.8139354061414,3.19668562899521,0,0,0,19.1538097494865,11.3477044938228,7.4738669879469,0,0.521482918420201,0.434377689410233,6.05399502633369,18.7821594353658,15.5066569846033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483781656445426,0.146178634172371,0.246346371159628,0,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p11@CFB | |short_description=p11@CFB | ||
}} | }} |
Latest revision as of 01:07, 18 September 2015
Short description: | p11@CFB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CFB_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 107bp_to_ENST00000467150_5end |
EntrezGene: | CFB |
HGNC: | 1037 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.46e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.46e-60 | 42 |
defensive cell | 1.63e-52 | 48 |
phagocyte | 1.63e-52 | 48 |
monopoietic cell | 9.19e-42 | 59 |
monocyte | 9.19e-42 | 59 |
monoblast | 9.19e-42 | 59 |
promonocyte | 9.19e-42 | 59 |
macrophage dendritic cell progenitor | 2.25e-40 | 61 |
myeloid lineage restricted progenitor cell | 2.89e-37 | 66 |
granulocyte monocyte progenitor cell | 1.07e-36 | 67 |
myeloid leukocyte | 4.27e-34 | 72 |
myeloid cell | 2.21e-22 | 108 |
common myeloid progenitor | 2.21e-22 | 108 |
nongranular leukocyte | 6.05e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 5.10e-20 | 120 |
leukocyte | 1.65e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.42e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-14 | 161 |
hematopoietic stem cell | 6.61e-14 | 168 |
hematopoietic cell | 4.00e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.96e-32 | 76 |
bone element | 7.93e-30 | 82 |
skeletal element | 4.38e-27 | 90 |
immune system | 3.54e-26 | 93 |
hematopoietic system | 8.75e-25 | 98 |
blood island | 8.75e-25 | 98 |
skeletal system | 2.89e-24 | 100 |
hemolymphoid system | 2.21e-22 | 108 |
musculoskeletal system | 5.35e-14 | 167 |
lateral plate mesoderm | 3.01e-11 | 203 |