FFCP PHASE1:Hg19::chr16:81478798..81478895,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80790 | |EntrezGene=80790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24319 | |HGNC=24319 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IY22 | |UniProt=Q8IY22 | ||
|association_with_transcript=23bp_to_ENST00000537098,NM_198390,uc002fgp.2_5end | |association_with_transcript=23bp_to_ENST00000537098,NM_198390,uc002fgp.2_5end | ||
|cluster_id=chr16:81478798..81478895,+ | |||
|description=CAGE_peak_4_at_CMIP_5end | |description=CAGE_peak_4_at_CMIP_5end | ||
|id=chr16:81478798..81478895,+ | |id=chr16:81478798..81478895,+ | ||
|ontology_enrichment_celltype=CL:0000766!5.13e-16!76;CL:0002057!3.80e-15!42;CL:0000557!2.92e-13!71;CL:0000763!6.89e-13!112;CL:0000049!6.89e-13!112;CL:0000860!1.59e-12!45;CL:0000115!1.79e-12!35;CL:0002078!3.85e-11!44;CL:0000839!7.66e-11!70;CL:0002009!9.60e-11!65;CL:0002194!4.41e-10!63;CL:0000576!4.41e-10!63;CL:0000040!4.41e-10!63;CL:0000559!4.41e-10!63;CL:0000066!5.00e-10!254;CL:0002139!1.73e-09!24;CL:0000213!3.20e-08!57;CL:0000215!3.20e-08!57;CL:0000071!6.91e-08!18;CL:0002546!6.91e-08!18;CL:0000738!5.86e-07!140 | |ontology_enrichment_celltype=CL:0000766!5.13e-16!76;CL:0002057!3.80e-15!42;CL:0000557!2.92e-13!71;CL:0000763!6.89e-13!112;CL:0000049!6.89e-13!112;CL:0000860!1.59e-12!45;CL:0000115!1.79e-12!35;CL:0002078!3.85e-11!44;CL:0000839!7.66e-11!70;CL:0002009!9.60e-11!65;CL:0002194!4.41e-10!63;CL:0000576!4.41e-10!63;CL:0000040!4.41e-10!63;CL:0000559!4.41e-10!63;CL:0000066!5.00e-10!254;CL:0002139!1.73e-09!24;CL:0000213!3.20e-08!57;CL:0000215!3.20e-08!57;CL:0000071!6.91e-08!18;CL:0002546!6.91e-08!18;CL:0000738!5.86e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.08e-15;33!CL:0002057;4.08e-15;33!CL:0000473;3.81e-11;39!CL:0000234;3.81e-11;39!CL:0000576;6.78e-11;48!CL:0000115;8.18e-11;36!CL:0002139;4.77e-10;24!CL:0000766;3.05e-09;69!CL:0000071;3.53e-08;18!CL:0002078;9.27e-08;45 | |ontology_enrichment_celltype_v019=CL:0000860;4.08e-15;33!CL:0002057;4.08e-15;33!CL:0000473;3.81e-11;39!CL:0000234;3.81e-11;39!CL:0000576;6.78e-11;48!CL:0000115;8.18e-11;36!CL:0002139;4.77e-10;24!CL:0000766;3.05e-09;69!CL:0000071;3.53e-08;18!CL:0002078;9.27e-08;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.13e-20,72;CL:0000557,1.98e-17,67;CL:0000860,2.88e-16,42;CL:0002057,2.88e-16,42;CL:0000763,1.95e-15,108;CL:0000049,1.95e-15,108;CL:0000839,8.34e-15,66;CL:0000473,1.85e-14,48;CL:0000234,1.85e-14,48;CL:0002009,1.86e-14,61;CL:0002194,1.12e-13,59;CL:0000576,1.12e-13,59;CL:0000040,1.12e-13,59;CL:0000559,1.12e-13,59;CL:0000115,4.31e-13,36;CL:0002078,3.34e-11,45;CL:0002139,3.99e-10,24;CL:0000066,1.67e-09,253;CL:0000738,5.88e-09,136;CL:0000071,2.14e-08,18;CL:0002546,2.14e-08,18;CL:0000213,6.72e-08,58;CL:0000215,6.72e-08,58;CL:0002032,8.08e-07,161;CL:0000837,8.08e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.78e-12;42!CL:0002546;3.53e-08;18 | |ontology_enrichment_development_v019=CL:0002057;3.78e-12;42!CL:0002546;3.53e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.86e-10!115;UBERON:0000487!1.11e-09!22;UBERON:0002371!2.28e-09!80;UBERON:0006914!1.64e-08!25;UBERON:0002193!2.26e-08!112;UBERON:0001474!3.98e-08!86;UBERON:0001986!6.91e-08!18;UBERON:0004638!6.91e-08!18;UBERON:0004852!6.91e-08!18;UBERON:0004111!3.46e-07!241;UBERON:0002390!7.98e-07!102;UBERON:0003061!7.98e-07!102 | |ontology_enrichment_uberon=UBERON:0002405!4.86e-10!115;UBERON:0000487!1.11e-09!22;UBERON:0002371!2.28e-09!80;UBERON:0006914!1.64e-08!25;UBERON:0002193!2.26e-08!112;UBERON:0001474!3.98e-08!86;UBERON:0001986!6.91e-08!18;UBERON:0004638!6.91e-08!18;UBERON:0004852!6.91e-08!18;UBERON:0004111!3.46e-07!241;UBERON:0002390!7.98e-07!102;UBERON:0003061!7.98e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000487;3.79e-10;22!UBERON:0000490;6.77e-09;33!UBERON:0006914;1.68e-08;25!UBERON:0004638;3.53e-08;18!UBERON:0001986;3.53e-08;18!UBERON:0004852;3.53e-08;18 | |ontology_enrichment_uberon_v019=UBERON:0000487;3.79e-10;22!UBERON:0000490;6.77e-09;33!UBERON:0006914;1.68e-08;25!UBERON:0004638;3.53e-08;18!UBERON:0001986;3.53e-08;18!UBERON:0004852;3.53e-08;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,8.78e-15,93;UBERON:0002371,7.32e-13,76;UBERON:0002193,4.65e-12,108;UBERON:0001474,6.25e-11,82;UBERON:0000487,2.48e-10,22;UBERON:0002390,3.59e-10,98;UBERON:0003061,3.59e-10,98;UBERON:0004765,1.17e-09,90;UBERON:0006914,1.03e-08,25;UBERON:0004638,2.14e-08,18;UBERON:0001986,2.14e-08,18;UBERON:0004852,2.14e-08,18;UBERON:0000922,3.83e-08,592;UBERON:0003081,6.79e-08,203;UBERON:0005423,8.44e-08,581;UBERON:0001434,2.60e-07,100;UBERON:0004111,4.79e-07,240;UBERON:0002050,5.89e-07,564 | |||
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| ||
|short_description=p4@CMIP | |short_description=p4@CMIP | ||
}} | }} |
Latest revision as of 01:01, 18 September 2015
Short description: | p4@CMIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CMIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000537098, NM_198390, uc002fgp.2_5end |
EntrezGene: | CMIP |
HGNC: | 24319 |
UniProt: | Q8IY22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.13e-20 | 72 |
granulocyte monocyte progenitor cell | 1.98e-17 | 67 |
classical monocyte | 2.88e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.88e-16 | 42 |
myeloid cell | 1.95e-15 | 108 |
common myeloid progenitor | 1.95e-15 | 108 |
myeloid lineage restricted progenitor cell | 8.34e-15 | 66 |
defensive cell | 1.85e-14 | 48 |
phagocyte | 1.85e-14 | 48 |
macrophage dendritic cell progenitor | 1.86e-14 | 61 |
monopoietic cell | 1.12e-13 | 59 |
monocyte | 1.12e-13 | 59 |
monoblast | 1.12e-13 | 59 |
promonocyte | 1.12e-13 | 59 |
endothelial cell | 4.31e-13 | 36 |
meso-epithelial cell | 3.34e-11 | 45 |
endothelial cell of vascular tree | 3.99e-10 | 24 |
epithelial cell | 1.67e-09 | 253 |
leukocyte | 5.88e-09 | 136 |
blood vessel endothelial cell | 2.14e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.14e-08 | 18 |
lining cell | 6.72e-08 | 58 |
barrier cell | 6.72e-08 | 58 |
hematopoietic oligopotent progenitor cell | 8.08e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.08e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
immune system | 8.78e-15 | 93 |
bone marrow | 7.32e-13 | 76 |
hemolymphoid system | 4.65e-12 | 108 |
bone element | 6.25e-11 | 82 |
simple squamous epithelium | 2.48e-10 | 22 |
hematopoietic system | 3.59e-10 | 98 |
blood island | 3.59e-10 | 98 |
skeletal element | 1.17e-09 | 90 |
squamous epithelium | 1.03e-08 | 25 |
blood vessel endothelium | 2.14e-08 | 18 |
endothelium | 2.14e-08 | 18 |
cardiovascular system endothelium | 2.14e-08 | 18 |
embryo | 3.83e-08 | 592 |
lateral plate mesoderm | 6.79e-08 | 203 |
developing anatomical structure | 8.44e-08 | 581 |
skeletal system | 2.60e-07 | 100 |
anatomical conduit | 4.79e-07 | 240 |
embryonic structure | 5.89e-07 | 564 |