FFCP PHASE1:Hg19::chr9:86955632..86955640,-: Difference between revisions
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|id=chr9:86955632..86955640,-
|short_description=p5@SLC28A3
|description=CAGE_peak_5_at_SLC28A3_5end
|association_with_transcript=31bp_to_ENST00000537648_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64078 | |EntrezGene=64078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16484 | |HGNC=16484 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYE3 | |UniProt=F5GYE3 | ||
|association_with_transcript=31bp_to_ENST00000537648_5end | |||
|cluster_id=chr9:86955632..86955640,- | |||
|description=CAGE_peak_5_at_SLC28A3_5end | |||
|id=chr9:86955632..86955640,- | |||
|ontology_enrichment_celltype=CL:0002621!8.36e-15!3;CL:0001014!3.94e-11!2;CL:0001016!3.94e-11!2;CL:0000039!1.06e-10!7;CL:0000586!1.06e-10!7;CL:0002251!1.97e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0001014;7.41e-67;2!CL:0001016;7.41e-67;2!CL:0000453;1.59e-27;5!CL:0000840;3.88e-23;5!CL:0000990;8.39e-16;8!CL:0000451;4.00e-13;10!CL:0002178;2.31e-12;3!CL:0000083;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,7.41e-67,2;CL:0001016,7.41e-67,2;CL:0000453,1.59e-27,5;CL:0000840,3.88e-23,5;CL:0001029,3.88e-23,5;CL:0000990,8.39e-16,8;CL:0000451,4.00e-13,10;CL:0002178,2.31e-12,3;CL:0000083,1.57e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;7.05e-34;1!DOID:10165;7.05e-34;1!DOID:1798;7.05e-34;1!DOID:3493;7.67e-18;2!DOID:1793;1.57e-09;4!DOID:170;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,7.06e-34,1;DOID:10165,7.06e-34,1;DOID:1798,7.06e-34,1;DOID:3493,7.67e-18,2;DOID:1793,1.57e-09,4;DOID:170,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0006947!4.33e-15!3;UBERON:0004054!4.33e-15!3;UBERON:0001949!8.36e-15!3;UBERON:0005904!1.95e-11!4;UBERON:0003127!1.31e-10!2;UBERON:0004175!3.27e-08!25;UBERON:0000002!2.12e-07!6;UBERON:0001560!2.12e-07!6;UBERON:0000166!2.33e-07!21;UBERON:0003135!5.46e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;7.05e-34;1!UBERON:0005352;7.05e-34;1!UBERON:0001896;2.89e-12;3!UBERON:0006947;2.89e-12;3!UBERON:0005290;2.89e-12;3!UBERON:0004054;2.89e-12;3!UBERON:0005904;1.57e-09;4!UBERON:0000945;6.13e-08;5!UBERON:0010039;6.13e-08;5!UBERON:0002298;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,9.85e-34,1;UBERON:0005352,9.85e-34,1;UBERON:0001896,2.59e-12,3;UBERON:0005290,2.59e-12,3;UBERON:0010096,2.59e-12,3;UBERON:0006947,3.24e-12,3;UBERON:0004054,3.24e-12,3;UBERON:0005904,1.70e-09,4;UBERON:0002298,8.48e-07,6 | |||
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| ||
|short_description=p5@SLC28A3 | |||
}} | }} |
Latest revision as of 00:44, 18 September 2015
Short description: | p5@SLC28A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC28A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000537648_5end |
EntrezGene: | SLC28A3 |
HGNC: | 16484 |
UniProt: | F5GYE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 7.41e-67 | 2 |
immature CD1a-positive Langerhans cell | 7.41e-67 | 2 |
Langerhans cell | 1.59e-27 | 5 |
immature conventional dendritic cell | 3.88e-23 | 5 |
common dendritic progenitor | 3.88e-23 | 5 |
conventional dendritic cell | 8.39e-16 | 8 |
dendritic cell | 4.00e-13 | 10 |
epithelial cell of stomach | 2.31e-12 | 3 |
epithelial cell of pancreas | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 9.85e-34 | 1 |
spermatic cord | 9.85e-34 | 1 |
medulla oblongata | 2.59e-12 | 3 |
myelencephalon | 2.59e-12 | 3 |
future myelencephalon | 2.59e-12 | 3 |
male genital duct | 3.24e-12 | 3 |
internal male genitalia | 3.24e-12 | 3 |
duct of male reproductive system | 1.70e-09 | 4 |
brainstem | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 7.06e-34 | 1 |
endocrine pancreas cancer | 7.06e-34 | 1 |
pancreatic endocrine carcinoma | 7.06e-34 | 1 |
signet ring cell adenocarcinoma | 7.67e-18 | 2 |
pancreatic cancer | 1.57e-09 | 4 |
endocrine gland cancer | 8.97e-07 | 6 |