FFCP PHASE1:Hg19::chr11:44748482..44748571,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90139 | |EntrezGene=90139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20660 | |HGNC=20660 | ||
|TSSclassifier=strong | |||
|UniProt=E9PL40 | |UniProt=E9PL40 | ||
|association_with_transcript=-81bp_to_ENST00000533080_5end | |association_with_transcript=-81bp_to_ENST00000533080_5end | ||
|cluster_id=chr11:44748482..44748571,+ | |||
|description=CAGE_peak_1_at_TSPAN18_5end | |description=CAGE_peak_1_at_TSPAN18_5end | ||
|id=chr11:44748482..44748571,+ | |id=chr11:44748482..44748571,+ | ||
|ontology_enrichment_celltype=CL:0002139;5.83e-18;24!CL:0000115;4.52e-14;36!CL:0000071;1.88e-13;18!CL:0002078;1.44e-08;45!CL:0000213;2.89e-08;58!CL:0000215;2.89e-08;58!CL:0000791;9.11e-07;18!CL:0000789;9.11e-07;18!CL:0002419;9.11e-07;18 | |ontology_enrichment_celltype=CL:0002139!4.65e-16!24;CL:0000115!5.98e-14!35;CL:0002078!1.42e-12!44;CL:0000071!4.48e-12!18;CL:0002546!4.48e-12!18;CL:0000213!2.78e-11!57;CL:0000215!2.78e-11!57 | ||
| | |ontology_enrichment_celltype_v019=CL:0002139;5.83e-18;24!CL:0000115;4.52e-14;36!CL:0000071;1.88e-13;18!CL:0002078;1.44e-08;45!CL:0000213;2.89e-08;58!CL:0000215;2.89e-08;58!CL:0000791;9.11e-07;18!CL:0000789;9.11e-07;18!CL:0002419;9.11e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.06e-18,24;CL:0000115,1.22e-16,36;CL:0002078,1.60e-13,45;CL:0000071,1.93e-13,18;CL:0002546,1.93e-13,18;CL:0000213,5.77e-12,58;CL:0000215,5.77e-12,58;CL:0000791,8.39e-07,18;CL:0000789,8.39e-07,18;CL:0002420,8.39e-07,18;CL:0002419,8.39e-07,18;CL:0000790,8.39e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.88e-13;18!CL:0000790;9.11e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004638;1.88e-13;18!UBERON:0001986;1.88e-13;18!UBERON:0004852;1.88e-13;18!UBERON:0000922;8.05e-11;49!UBERON:0000487;1.05e-10;22!UBERON:0006914;2.58e-08;25!UBERON:0007023;8.13e-07;114 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.20e-21!115;UBERON:0001986!4.48e-12!18;UBERON:0004638!4.48e-12!18;UBERON:0004852!4.48e-12!18;UBERON:0000487!2.13e-09!22;UBERON:0000073!2.04e-08!94;UBERON:0001016!2.04e-08!94;UBERON:0006914!2.49e-08!25;UBERON:0001049!1.52e-07!57;UBERON:0005068!1.52e-07!57;UBERON:0006241!1.52e-07!57;UBERON:0007135!1.52e-07!57;UBERON:0005743!1.94e-07!86;UBERON:0001017!2.55e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.88e-13;18!UBERON:0001986;1.88e-13;18!UBERON:0004852;1.88e-13;18!UBERON:0000922;8.05e-11;49!UBERON:0000487;1.05e-10;22!UBERON:0006914;2.58e-08;25!UBERON:0007023;8.13e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.07e-23,114;UBERON:0004638,1.93e-13,18;UBERON:0001986,1.93e-13,18;UBERON:0004852,1.93e-13,18;UBERON:0000487,8.07e-11,22;UBERON:0001016,8.97e-09,89;UBERON:0006914,2.07e-08,25;UBERON:0001017,1.66e-07,81;UBERON:0001049,3.70e-07,56;UBERON:0005068,3.70e-07,56;UBERON:0006241,3.70e-07,56;UBERON:0007135,3.70e-07,56 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,6.00439790118782,0.446961094427288,1.74467704820074,20.2639902534648,0,0,1.72013755551056,1.39560233594486,0,0,0,0,2.01697543935533,0,0,0,4.55547914884115,1.22400414746552,8.46327747990837,7.15589967827642,3.55873505189499,7.78364365487777,0.0764134057479513,0.492603536699674,0.393553906568396,1.57345710739562,0.767658796194425,1.23852898652861,0,0,0,0,0.284338464974843,0.293600439334847,1.10799081706375,2.4065333696417,1.95309783644267,0,0,0.257575567634187,0,0.755751887377619,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0.199463657621632,0,0,1.13477044938228,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,3.51992488922645,0.546138611262131,0.889509253863555,2.13365111283254,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,0.569212969109448,1.76171156811282,0.382273228125229,0,1.12101712596307,0.526768169550154,29.506465517075,27.5107533924415,26.3169918719372,32.9357395919636,12.71096839871,8.99550830895993,23.3792074089494,9.24706792146941,10.900418576569,9.52595746709571,6.77009659412539,7.30120522436348,5.33243324995501,14.9638493189345,12.4357508003632,27.821096230565,24.7638560480641,23.5435928718948,22.9978152370949,37.9586298036847,19.544245173698,18.555882056062,19.7355359775212,17.5210977878253,11.7195021694155,8.55406840003537,13.8529109551551,13.0546343377507,8.74515085866421,12.3124171062889,4.92676798152628,7.86266298576456,6.41856469880418,7.24122019413995,0,5.36560687762909,6.13740296848946,0,4.51204119572301,6.80778639115871,0.795285947051099,0,0.189069634328136,0.665188192387692,0.263504357079378,17.4857065789446,0,0,0,0,0,0.238490624305342,0,0.371457501329565,42.7339175838416,28.3877416385021,39.5740171832657,33.9184765154406,25.1699661725944,14.3061381808835,27.587335582859,54.0091026663897,49.8072767761394,124.850788561222,65.661178688791,50.1779589774218,152.05066185251,50.0021789270381,15.3926970097534,67.4212948544802,75.4418692023931,67.9047227314433,44.4618248651061,51.260345616679,51.296488300514,1.31780417436063,7.75560528296651,0,1.49091585508596,0.379891534993739,0,0.286836620748814,0.709336764396714,7.28880880184999,3.20246987189115,3.94668077467456,4.35695449559673,4.44545217829971,2.61539044981534,0.605429710579726,0,0.70296429550139,0,3.99330275081114,0,0.352303495931295,0.323745888736263,0,0,0,0,1.18800285728205,7.66527480763526,0.910161361938026,0,0.168336113954066,0,0,3.5118209670467,2.14541457059314,2.85452311922534,1.02088964844019,2.33206526395521,26.4811162135024,11.0204588602972,1.50045548042201,1.54578793857658,0.772921620136887,2.97786970130544,1.35021065793013,2.33848812386877,1.51460264546469,5.33889412125336,5.33431987502079,6.03516307278244,4.53384442024381,1.3564847384839,0,0,0,20.7355300420312,16.5662210401857,21.2634915451219,27.2628574690424,22.4565557279309,6.20461510428911,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,157.965267289675,100.974077138481,3.7041661019826,7.3504355692771,0,0,12.4065880403095,0,1.72183813960359,0.343135620597051,0.109750285408626,0,0.502644862058154,0.185176890317059,0,0,0,3.70977295920246,0.469634776943287,62.3663054327839,61.1140876601126,53.8419250823913,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0.766765358330422,1.47798971368783,11.3582479877062,0.621984346622316,0.288239906833923,0.25248486685276,0,0,0,8.55362230113526,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.904902010304444,10.7296933755565,3.381211010224,0,0,0.257207374262142,0,0,0,0,0,2.93162565864362,0.355391948742546,0,2.41151501647669,15.6876022548053,19.6946792628652,0,0,0,0,1.14861935834114,0,0,0,0,0,10.6396610509041,6.68445482064504,9.75407075726088,3.55732473911449,15.6167824629146,10.05275456611,13.5688174920822,8.29320377149112,0.749007023947182,2.99161459204025,0.414415513436035,0,1.00034104211935,0,0,0,0,0,41.2296156626975,27.2889004867182,1.03473071292505,5.97803038681893,8.84972009000175,0,1.95801157462741,0.686286847621712,10.1316332800215,6.68714022537712,8.21802195086521,0.303127571446259,0,0,0.496215615637554,0.460385919864187,0.841980283299221,0,2.55853624533352,0.64341568457443,0,0,0.355123450626254,0.328508624055237,0,0.348631135379878,1.45031339509947,0,0,0,0,0,0.451199612907412,0.462092022626489,0,0,0.105551628892876,102.360045663807,30.1065858339433,38.8648648983851,178.903613120736,0,0,1.78413391131527,0.831076008928724,0,0,0,0.769350375349168,0.328014645699706,0.650756789328606,9.99497812982906,27.196131051048,27.228134973794,0.574265537996172,1.30012049207304,1.6068392984416,4.06017016826912,0,0.15350367472613,1.51620229732984,0.107420244868274,0.290033387828457,1.36362603865761,3.91740956845644,0,0,0,0,0.464845549297286,0.31481234683064,0,3.08033580176089,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0.551365343546124,0,0,0.578775534266688,0,0,1.54911749049875,0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| ||
|short_description=p1@TSPAN18 | |short_description=p1@TSPAN18 | ||
}} | }} |
Latest revision as of 00:40, 18 September 2015
Short description: | p1@TSPAN18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSPAN18_5end |
Coexpression cluster: | NA |
Association with transcript: | -81bp_to_ENST00000533080_5end |
EntrezGene: | TSPAN18 |
HGNC: | 20660 |
UniProt: | E9PL40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.06e-18 | 24 |
endothelial cell | 1.22e-16 | 36 |
meso-epithelial cell | 1.60e-13 | 45 |
blood vessel endothelial cell | 1.93e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.93e-13 | 18 |
lining cell | 5.77e-12 | 58 |
barrier cell | 5.77e-12 | 58 |
mature alpha-beta T cell | 8.39e-07 | 18 |
alpha-beta T cell | 8.39e-07 | 18 |
immature T cell | 8.39e-07 | 18 |
mature T cell | 8.39e-07 | 18 |
immature alpha-beta T cell | 8.39e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.07e-23 | 114 |
blood vessel endothelium | 1.93e-13 | 18 |
endothelium | 1.93e-13 | 18 |
cardiovascular system endothelium | 1.93e-13 | 18 |
simple squamous epithelium | 8.07e-11 | 22 |
nervous system | 8.97e-09 | 89 |
squamous epithelium | 2.07e-08 | 25 |
central nervous system | 1.66e-07 | 81 |
neural tube | 3.70e-07 | 56 |
neural rod | 3.70e-07 | 56 |
future spinal cord | 3.70e-07 | 56 |
neural keel | 3.70e-07 | 56 |