FFCP PHASE1:Hg19::chr1:40157064..40157116,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51440 | |EntrezGene=51440 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18212 | |HGNC=18212 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UM19 | |UniProt=Q9UM19 | ||
|association_with_transcript=0bp_to_NM_016257,uc001cdr.2,uc010oix.1_5end | |association_with_transcript=0bp_to_NM_016257,uc001cdr.2,uc010oix.1_5end | ||
|cluster_id=chr1:40157064..40157116,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_HPCAL4_5end | |description=CAGE_peak_1_at_HPCAL4_5end | ||
|id=chr1:40157064..40157116,- | |id=chr1:40157064..40157116,- | ||
|ontology_enrichment_celltype=CL:0000791!3.54e-11!18;CL:0000789!3.54e-11!18;CL:0002420!3.54e-11!18;CL:0002419!3.54e-11!18;CL:0000790!3.54e-11!18;CL:0002057!5.21e-09!42;CL:0000084!7.64e-09!25;CL:0000827!7.64e-09!25;CL:0000860!1.17e-08!45;CL:0002087!5.08e-08!119;CL:0000625!1.11e-07!11 | |ontology_enrichment_celltype=CL:0000791!3.54e-11!18;CL:0000789!3.54e-11!18;CL:0002420!3.54e-11!18;CL:0002419!3.54e-11!18;CL:0000790!3.54e-11!18;CL:0002057!5.21e-09!42;CL:0000084!7.64e-09!25;CL:0000827!7.64e-09!25;CL:0000860!1.17e-08!45;CL:0002087!5.08e-08!119;CL:0000625!1.11e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.58e-15;18!CL:0000789;7.58e-15;18!CL:0002419;7.58e-15;18!CL:0000625;1.77e-10;11!CL:0000084;2.51e-10;25!CL:0000624;3.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.90e-15,18;CL:0000789,6.90e-15,18;CL:0002420,6.90e-15,18;CL:0002419,6.90e-15,18;CL:0000790,6.90e-15,18;CL:0000625,1.61e-10,11;CL:0000084,2.33e-10,25;CL:0000827,2.33e-10,25;CL:0000624,3.22e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;7.58e-15;18!UBERON:0006601;2.38e-12;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-36!115;UBERON:0001049!1.12e-31!57;UBERON:0005068!1.12e-31!57;UBERON:0006241!1.12e-31!57;UBERON:0007135!1.12e-31!57;UBERON:0001017!6.26e-30!82;UBERON:0005743!5.32e-29!86;UBERON:0000073!3.72e-28!94;UBERON:0001016!3.72e-28!94;UBERON:0002780!1.34e-26!41;UBERON:0001890!1.34e-26!41;UBERON:0006240!1.34e-26!41;UBERON:0000955!1.44e-25!69;UBERON:0006238!1.44e-25!69;UBERON:0003080!1.85e-25!42;UBERON:0002616!6.80e-25!59;UBERON:0002020!2.25e-22!34;UBERON:0003528!2.25e-22!34;UBERON:0001893!2.35e-22!34;UBERON:0002791!1.33e-21!33;UBERON:0001869!4.05e-21!32;UBERON:0003075!5.46e-20!86;UBERON:0007284!5.46e-20!86;UBERON:0002346!2.92e-19!90;UBERON:0002619!1.53e-18!22;UBERON:0001950!6.36e-17!20;UBERON:0000956!6.46e-16!25;UBERON:0000203!6.46e-16!25;UBERON:0003056!1.61e-13!61;UBERON:0004121!2.08e-10!169;UBERON:0000924!3.00e-10!173;UBERON:0006601!3.00e-10!173;UBERON:0000153!3.87e-10!129;UBERON:0007811!3.87e-10!129;UBERON:0000033!1.03e-09!123;UBERON:0002420!3.23e-08!9;UBERON:0007245!3.23e-08!9;UBERON:0010009!3.23e-08!9;UBERON:0010011!3.23e-08!9;UBERON:0000454!3.23e-08!9;UBERON:0002308!5.60e-08!9;UBERON:0000125!5.60e-08!9;UBERON:0003076!1.88e-07!15;UBERON:0003057!1.88e-07!15;UBERON:0001871!3.10e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.33e-36!115;UBERON:0001049!1.12e-31!57;UBERON:0005068!1.12e-31!57;UBERON:0006241!1.12e-31!57;UBERON:0007135!1.12e-31!57;UBERON:0001017!6.26e-30!82;UBERON:0005743!5.32e-29!86;UBERON:0000073!3.72e-28!94;UBERON:0001016!3.72e-28!94;UBERON:0002780!1.34e-26!41;UBERON:0001890!1.34e-26!41;UBERON:0006240!1.34e-26!41;UBERON:0000955!1.44e-25!69;UBERON:0006238!1.44e-25!69;UBERON:0003080!1.85e-25!42;UBERON:0002616!6.80e-25!59;UBERON:0002020!2.25e-22!34;UBERON:0003528!2.25e-22!34;UBERON:0001893!2.35e-22!34;UBERON:0002791!1.33e-21!33;UBERON:0001869!4.05e-21!32;UBERON:0003075!5.46e-20!86;UBERON:0007284!5.46e-20!86;UBERON:0002346!2.92e-19!90;UBERON:0002619!1.53e-18!22;UBERON:0001950!6.36e-17!20;UBERON:0000956!6.46e-16!25;UBERON:0000203!6.46e-16!25;UBERON:0003056!1.61e-13!61;UBERON:0004121!2.08e-10!169;UBERON:0000924!3.00e-10!173;UBERON:0006601!3.00e-10!173;UBERON:0000153!3.87e-10!129;UBERON:0007811!3.87e-10!129;UBERON:0000033!1.03e-09!123;UBERON:0002420!3.23e-08!9;UBERON:0007245!3.23e-08!9;UBERON:0010009!3.23e-08!9;UBERON:0010011!3.23e-08!9;UBERON:0000454!3.23e-08!9;UBERON:0002308!5.60e-08!9;UBERON:0000125!5.60e-08!9;UBERON:0003076!1.88e-07!15;UBERON:0003057!1.88e-07!15;UBERON:0001871!3.10e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.49e-27;41!UBERON:0001890;2.49e-27;41!UBERON:0001893;6.39e-27;34!UBERON:0003528;6.49e-27;34!UBERON:0002020;6.49e-27;34!UBERON:0001869;8.23e-27;32!UBERON:0002791;1.28e-26;32!UBERON:0002619;1.76e-26;22!UBERON:0000073;6.20e-25;53!UBERON:0002616;6.20e-25;53!UBERON:0001950;4.20e-24;20!UBERON:0000956;2.63e-22;25!UBERON:0000203;2.63e-22;25!UBERON:0000955;8.14e-17;68!UBERON:0001017;8.42e-17;75!UBERON:0001016;1.95e-14;83!UBERON:0007023;3.02e-12;114!UBERON:0002420;2.68e-11;9!UBERON:0007245;2.68e-11;9!UBERON:0010009;2.68e-11;9!UBERON:0010011;2.68e-11;9!UBERON:0000454;2.68e-11;9!UBERON:0000125;6.02e-11;9!UBERON:0002308;6.02e-11;9!UBERON:0009663;6.79e-09;7!UBERON:0001871;8.31e-09;6!UBERON:0000200;2.63e-08;6!UBERON:0004732;4.73e-08;13!UBERON:0001894;1.41e-07;7!UBERON:0000349;1.49e-07;5!UBERON:0004733;1.78e-07;12!UBERON:0002028;1.78e-07;12!UBERON:0002298;1.80e-07;6!UBERON:0000178;4.66e-07;15!UBERON:0000179;4.66e-07;15!UBERON:0000463;4.66e-07;15!UBERON:0002021;5.53e-07;5!UBERON:0001872;5.84e-07;5 | |||
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| ||
|short_description=p1@HPCAL4 | |short_description=p1@HPCAL4 | ||
}} | }} |
Latest revision as of 00:15, 18 September 2015
Short description: | p1@HPCAL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HPCAL4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_016257, uc001cdr.2, uc010oix.1_5end |
EntrezGene: | HPCAL4 |
HGNC: | 18212 |
UniProt: | Q9UM19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.90e-15 | 18 |
alpha-beta T cell | 6.90e-15 | 18 |
immature T cell | 6.90e-15 | 18 |
mature T cell | 6.90e-15 | 18 |
immature alpha-beta T cell | 6.90e-15 | 18 |
CD8-positive, alpha-beta T cell | 1.61e-10 | 11 |
T cell | 2.33e-10 | 25 |
pro-T cell | 2.33e-10 | 25 |
CD4-positive, alpha-beta T cell | 3.22e-07 | 6 |