FFCP PHASE1:Hg19::chr8:3142218..3142244,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:3142218..3142244,-
|short_description=p12@CSMD1
|description=CAGE_peak_12_at_CSMD1_5end
|association_with_transcript=-42bp_to_ENST00000523387_5end
|Entrez...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64478 | |EntrezGene=64478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14026 | |HGNC=14026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_ENST00000523387_5end | |||
|cluster_id=chr8:3142218..3142244,- | |||
|description=CAGE_peak_12_at_CSMD1_5end | |||
|id=chr8:3142218..3142244,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.93e-13;1!DOID:4549;1.93e-13;1!DOID:5861;1.93e-13;1!DOID:6496;1.93e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.06e-13,1;DOID:4549,2.06e-13,1;DOID:5861,2.06e-13,1;DOID:6496,2.06e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0001869!2.39e-50!32;UBERON:0001893!3.44e-47!34;UBERON:0002780!9.83e-47!41;UBERON:0001890!9.83e-47!41;UBERON:0006240!9.83e-47!41;UBERON:0003080!1.60e-45!42;UBERON:0002791!9.57e-44!33;UBERON:0002020!2.31e-42!34;UBERON:0003528!2.31e-42!34;UBERON:0001049!2.44e-42!57;UBERON:0005068!2.44e-42!57;UBERON:0006241!2.44e-42!57;UBERON:0007135!2.44e-42!57;UBERON:0002619!1.70e-41!22;UBERON:0002616!9.99e-41!59;UBERON:0001950!6.40e-40!20;UBERON:0000955!1.82e-36!69;UBERON:0006238!1.82e-36!69;UBERON:0000956!2.69e-36!25;UBERON:0000203!2.69e-36!25;UBERON:0003056!6.35e-30!61;UBERON:0001017!7.39e-30!82;UBERON:0000073!1.56e-29!94;UBERON:0001016!1.56e-29!94;UBERON:0005743!3.23e-28!86;UBERON:0003075!3.23e-26!86;UBERON:0007284!3.23e-26!86;UBERON:0002346!8.40e-25!90;UBERON:0007023!6.49e-22!115;UBERON:0000153!3.30e-20!129;UBERON:0007811!3.30e-20!129;UBERON:0000033!9.07e-20!123;UBERON:0000200!2.68e-19!6;UBERON:0000369!7.06e-18!4;UBERON:0002435!7.06e-18!4;UBERON:0000204!7.06e-18!4;UBERON:0010082!7.06e-18!4;UBERON:0001872!3.06e-15!5;UBERON:0002771!1.11e-14!3;UBERON:0001871!3.65e-14!7;UBERON:0004121!8.37e-14!169;UBERON:0005383!1.09e-13!3;UBERON:0005382!1.09e-13!3;UBERON:0000924!2.41e-13!173;UBERON:0006601!2.41e-13!173;UBERON:0002420!4.87e-12!9;UBERON:0007245!4.87e-12!9;UBERON:0010009!4.87e-12!9;UBERON:0010011!4.87e-12!9;UBERON:0000454!4.87e-12!9;UBERON:0009663!2.89e-10!7;UBERON:0001873!5.75e-10!2;UBERON:0010122!5.75e-10!2;UBERON:0000025!2.12e-09!194;UBERON:0002021!1.08e-08!5;UBERON:0000349!1.64e-08!5;UBERON:0002308!5.34e-08!9;UBERON:0000125!5.34e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.78e-54;20!UBERON:0002619;4.03e-49;22!UBERON:0000200;2.95e-48;6!UBERON:0000956;2.46e-43;25!UBERON:0000203;2.46e-43;25!UBERON:0001893;8.15e-41;34!UBERON:0001869;6.04e-40;32!UBERON:0001872;2.02e-37;5!UBERON:0003528;1.00e-34;34!UBERON:0002020;1.00e-34;34!UBERON:0002791;5.16e-34;32!UBERON:0002771;2.96e-24;2!UBERON:0002780;2.52e-23;41!UBERON:0001890;2.52e-23;41!UBERON:0000073;1.73e-18;53!UBERON:0002616;1.73e-18;53!UBERON:0001870;1.61e-16;3!UBERON:0002581;5.06e-13;1!UBERON:0002902;5.06e-13;1!UBERON:0001882;5.06e-13;1!UBERON:0002022;5.06e-13;1!UBERON:0003112;5.06e-13;1!UBERON:0011158;5.06e-13;1!UBERON:0009899;5.06e-13;1!UBERON:0007190;5.06e-13;1!UBERON:0003128;5.06e-13;1!UBERON:0005403;5.06e-13;1!UBERON:0001703;5.06e-13;1!UBERON:0002241;5.06e-13;1!UBERON:0000955;2.40e-12;68!UBERON:0001017;4.22e-10;75!UBERON:0001016;3.99e-09;83!UBERON:0001871;1.33e-07;6!UBERON:0002702;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.88e-54,20;UBERON:0002619,2.99e-49,22;UBERON:0001869,7.16e-49,32;UBERON:0000200,5.62e-48,6;UBERON:0001893,5.30e-46,34;UBERON:0000956,1.89e-43,25;UBERON:0000203,1.89e-43,25;UBERON:0002791,4.42e-41,32;UBERON:0003528,1.16e-38,34;UBERON:0002020,1.16e-38,34;UBERON:0002780,4.17e-38,41;UBERON:0001890,4.17e-38,41;UBERON:0003080,4.17e-38,41;UBERON:0006240,4.17e-38,41;UBERON:0001872,2.03e-37,5;UBERON:0000073,2.53e-29,53;UBERON:0002616,2.53e-29,53;UBERON:0001049,1.05e-27,56;UBERON:0005068,1.05e-27,56;UBERON:0006241,1.05e-27,56;UBERON:0007135,1.05e-27,56;UBERON:0003056,2.37e-25,61;UBERON:0002771,2.97e-24,2;UBERON:0000955,2.77e-22,68;UBERON:0006238,2.77e-22,68;UBERON:0001017,1.48e-18,81;UBERON:0003075,1.48e-18,82;UBERON:0007284,1.48e-18,82;UBERON:0002346,1.24e-17,86;UBERON:0001870,1.17e-16,3;UBERON:0001016,1.37e-16,89;UBERON:0010371,2.44e-14,104;UBERON:0002022,2.95e-13,1;UBERON:0002581,4.77e-13,1;UBERON:0010314,4.88e-13,132;UBERON:0003112,5.38e-13,1;UBERON:0011158,5.38e-13,1;UBERON:0003128,5.38e-13,1;UBERON:0001703,5.38e-13,1;UBERON:0002241,5.38e-13,1;UBERON:0004761,5.38e-13,1;UBERON:0009617,5.38e-13,1;UBERON:0002902,6.82e-13,1;UBERON:0009899,6.82e-13,1;UBERON:0007190,9.73e-13,1;UBERON:0001882,1.09e-12,1;UBERON:0005403,1.09e-12,1;UBERON:0007023,6.50e-11,114;UBERON:0004121,5.31e-08,171;UBERON:0000924,5.31e-08,171;UBERON:0006601,5.31e-08,171;UBERON:0001871,1.33e-07,6;UBERON:0005253,3.93e-07,2;UBERON:0002702,4.17e-07,2;UBERON:0000025,4.79e-07,192;UBERON:0011216,6.95e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.865615277858669,5.83363115456996,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20640316728751,0,0,0,1.58276989889697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,1.39723980313457,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34228891392159,1.1267183763585,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,0.215649622793364,0,0,0,0,0,0,0,1.89268188003008,0,0,0,1.02766760154335,0,0.638535436228605,0.82046545696302,0,1.10651603942749,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08060135389431,0,1.2401207790071,1.26831620387814,1.09394961803644,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.203909198930495,1.18390992413128,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.951880862672806,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.865615277858669,5.83363115456996,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20640316728751,0,0,0,1.58276989889697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,1.39723980313457,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34228891392159,1.1267183763585,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,0.215649622793364,0,0,0,0,0,0,0,1.89268188003008,0,0,0,1.02766760154335,0,0.638535436228605,0.82046545696302,0,1.10651603942749,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08060135389431,0,1.2401207790071,1.26831620387814,1.09394961803644,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.203909198930495,1.18390992413128,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.951880862672806,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@CSMD1 | |||
}} | }} |
Latest revision as of 00:09, 18 September 2015
Short description: | p12@CSMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CSMD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -42bp_to_ENST00000523387_5end |
EntrezGene: | CSMD1 |
HGNC: | 14026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.06e-13 | 1 |
extraosseous chondrosarcoma | 2.06e-13 | 1 |
myxoid chondrosarcoma | 2.06e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 2.06e-13 | 1 |