FFCP PHASE1:Hg19::chr2:167005607..167005628,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6323 | |EntrezGene=6323 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10585 | |HGNC=10585 | ||
|TSSclassifier=strong | |||
|UniProt=P35498 | |UniProt=P35498 | ||
|association_with_transcript=13bp_to_NM_001202435_5end | |association_with_transcript=13bp_to_NM_001202435_5end | ||
|cluster_id=chr2:167005607..167005628,- | |||
|coexpression_cluster_id=C247 | |coexpression_cluster_id=C247 | ||
|description=CAGE_peak_2_at_SCN1A_5end | |description=CAGE_peak_2_at_SCN1A_5end | ||
|id=chr2:167005607..167005628,- | |id=chr2:167005607..167005628,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.84e-20;82!UBERON:0006241;5.57e-09;3!UBERON:0003057;5.57e-09;3!UBERON:0006222;8.01e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@SCN1A | |short_description=p2@SCN1A | ||
}} | }} |
Latest revision as of 00:08, 18 September 2015
Short description: | p2@SCN1A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCN1A_5end |
Coexpression cluster: | C247_pons_locus_medulla_spinal_paracentral_medial_occipital |
Association with transcript: | 13bp_to_NM_001202435_5end |
EntrezGene: | SCN1A |
HGNC: | 10585 |
UniProt: | P35498 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data