FFCP PHASE1:Hg19::chr7:26400526..26400548,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29887 | |EntrezGene=29887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14974 | |HGNC=14974 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_uc010kuv.2_5end | |association_with_transcript=-6bp_to_uc010kuv.2_5end | ||
|cluster_id=chr7:26400526..26400548,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_SNX10_5end | |description=CAGE_peak_4_at_SNX10_5end | ||
|id=chr7:26400526..26400548,+ | |id=chr7:26400526..26400548,+ | ||
|ontology_enrichment_celltype=CL:0002009!4.75e-79!65;CL:0002194!1.42e-76!63;CL:0000576!1.42e-76!63;CL:0000040!1.42e-76!63;CL:0000559!1.42e-76!63;CL:0000766!2.75e-73!76;CL:0000557!8.60e-71!71;CL:0002057!3.10e-68!42;CL:0000839!4.22e-67!70;CL:0000860!1.14e-62!45;CL:0000738!1.16e-55!140;CL:0002087!2.32e-50!119;CL:0000763!3.22e-48!112;CL:0000049!3.22e-48!112;CL:0002031!1.47e-45!124;CL:0000037!2.75e-42!172;CL:0000566!2.75e-42!172;CL:0000988!1.14e-38!182;CL:0002032!1.08e-36!165;CL:0000837!1.08e-36!165;CL:0002393!2.15e-15!9;CL:0002397!2.15e-15!9;CL:0000134!3.34e-13!358;CL:0002320!1.61e-12!365;CL:0000219!3.78e-10!390;CL:0000451!5.65e-10!10;CL:0000840!4.43e-09!5;CL:0001029!4.43e-09!5;CL:0000048!1.05e-08!430;CL:0000034!1.11e-08!444;CL:0000723!2.72e-08!436;CL:0000990!1.51e-07!8 | |ontology_enrichment_celltype=CL:0002009!4.75e-79!65;CL:0002194!1.42e-76!63;CL:0000576!1.42e-76!63;CL:0000040!1.42e-76!63;CL:0000559!1.42e-76!63;CL:0000766!2.75e-73!76;CL:0000557!8.60e-71!71;CL:0002057!3.10e-68!42;CL:0000839!4.22e-67!70;CL:0000860!1.14e-62!45;CL:0000738!1.16e-55!140;CL:0002087!2.32e-50!119;CL:0000763!3.22e-48!112;CL:0000049!3.22e-48!112;CL:0002031!1.47e-45!124;CL:0000037!2.75e-42!172;CL:0000566!2.75e-42!172;CL:0000988!1.14e-38!182;CL:0002032!1.08e-36!165;CL:0000837!1.08e-36!165;CL:0002393!2.15e-15!9;CL:0002397!2.15e-15!9;CL:0000134!3.34e-13!358;CL:0002320!1.61e-12!365;CL:0000219!3.78e-10!390;CL:0000451!5.65e-10!10;CL:0000840!4.43e-09!5;CL:0001029!4.43e-09!5;CL:0000048!1.05e-08!430;CL:0000034!1.11e-08!444;CL:0000723!2.72e-08!436;CL:0000990!1.51e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.11e-67;39!CL:0000234;2.11e-67;39!CL:0000860;6.80e-67;33!CL:0002057;6.80e-67;33!CL:0000576;1.23e-61;48!CL:0000766;1.95e-44;69!CL:0000763;1.94e-20;100!CL:0002087;1.99e-16;104!CL:0000235;2.28e-16;6!CL:0002393;2.44e-16;6!CL:0002397;2.44e-16;6!CL:0000738;1.54e-15;136!CL:0002619;4.81e-09;3!CL:0000767;9.16e-09;3!CL:0000875;1.96e-08;3!CL:0002396;1.96e-08;3!CL:0000988;4.19e-08;177!CL:0000226;8.58e-08;3!CL:0000842;8.58e-08;3!CL:0000784;9.47e-08;3!CL:0000219;1.52e-07;193!CL:0000451;2.89e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.46e-117,59;CL:0000576,2.46e-117,59;CL:0000040,2.46e-117,59;CL:0000559,2.46e-117,59;CL:0002009,4.31e-113,61;CL:0000473,2.30e-112,48;CL:0000234,2.30e-112,48;CL:0000766,7.92e-110,72;CL:0000839,1.37e-103,66;CL:0000557,7.41e-102,67;CL:0000860,1.17e-96,42;CL:0002057,1.17e-96,42;CL:0000763,1.17e-68,108;CL:0000049,1.17e-68,108;CL:0000738,2.12e-64,136;CL:0002087,5.28e-63,115;CL:0002031,4.20e-53,120;CL:0000037,2.90e-49,168;CL:0000988,5.48e-46,177;CL:0002032,5.10e-43,161;CL:0000837,5.10e-43,161;CL:0002393,4.35e-23,9;CL:0002397,4.35e-23,9;CL:0000134,7.87e-18,354;CL:0002320,3.51e-17,361;CL:0000235,2.34e-16,6;CL:0000219,6.73e-15,386;CL:0000048,7.84e-13,427;CL:0000034,1.17e-12,441;CL:0000723,1.95e-12,433;CL:0002619,4.75e-09,3;CL:0000767,9.29e-09,3;CL:0000875,1.99e-08,3;CL:0002396,1.99e-08,3;CL:0000784,9.36e-08,3;CL:0000226,9.59e-08,3;CL:0000842,9.59e-08,3;CL:0000451,2.80e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-68;42!CL:0000049;1.28e-19;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.17e-63!80;UBERON:0002390!2.34e-60!102;UBERON:0003061!2.34e-60!102;UBERON:0001474!2.75e-57!86;UBERON:0002193!1.03e-54!112;UBERON:0002405!5.57e-51!115;UBERON:0004765!1.43e-47!101;UBERON:0001434!1.43e-47!101;UBERON:0002204!2.99e-24!167;UBERON:0003081!7.84e-23!216;UBERON:0002384!3.44e-12!375;UBERON:0000926!1.99e-08!448;UBERON:0004120!1.99e-08!448;UBERON:0006603!1.99e-08!448 | |ontology_enrichment_uberon=UBERON:0002371!5.17e-63!80;UBERON:0002390!2.34e-60!102;UBERON:0003061!2.34e-60!102;UBERON:0001474!2.75e-57!86;UBERON:0002193!1.03e-54!112;UBERON:0002405!5.57e-51!115;UBERON:0004765!1.43e-47!101;UBERON:0001434!1.43e-47!101;UBERON:0002204!2.99e-24!167;UBERON:0003081!7.84e-23!216;UBERON:0002384!3.44e-12!375;UBERON:0000926!1.99e-08!448;UBERON:0004120!1.99e-08!448;UBERON:0006603!1.99e-08!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.75e-88,76;UBERON:0001474,7.08e-81,82;UBERON:0002390,1.62e-76,98;UBERON:0003061,1.62e-76,98;UBERON:0002405,1.25e-72,93;UBERON:0004765,1.62e-72,90;UBERON:0002193,3.86e-68,108;UBERON:0001434,6.25e-64,100;UBERON:0002204,2.25e-34,167;UBERON:0003081,6.16e-31,203;UBERON:0002384,3.80e-17,371;UBERON:0000926,1.20e-15,315;UBERON:0004120,1.20e-15,315;UBERON:0006603,1.20e-15,315 | |||
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|short_description=p4@SNX10 | |short_description=p4@SNX10 | ||
}} | }} |
Latest revision as of 23:35, 17 September 2015
Short description: | p4@SNX10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNX10_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -6bp_to_uc010kuv.2_5end |
EntrezGene: | SNX10 |
HGNC: | 14974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.75e-88 | 76 |
bone element | 7.08e-81 | 82 |
hematopoietic system | 1.62e-76 | 98 |
blood island | 1.62e-76 | 98 |
immune system | 1.25e-72 | 93 |
skeletal element | 1.62e-72 | 90 |
hemolymphoid system | 3.86e-68 | 108 |
skeletal system | 6.25e-64 | 100 |
musculoskeletal system | 2.25e-34 | 167 |
lateral plate mesoderm | 6.16e-31 | 203 |
connective tissue | 3.80e-17 | 371 |
mesoderm | 1.20e-15 | 315 |
mesoderm-derived structure | 1.20e-15 | 315 |
presumptive mesoderm | 1.20e-15 | 315 |