FFCP PHASE1:Hg19::chr2:165698521..165698604,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22837 | |EntrezGene=22837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23571 | |HGNC=23571 | ||
|TSSclassifier=strong | |||
|UniProt=Q53SF7 | |UniProt=Q53SF7 | ||
|association_with_transcript=0bp_to_ENST00000392717,ENST00000409184_5end | |association_with_transcript=0bp_to_ENST00000392717,ENST00000409184_5end | ||
|cluster_id=chr2:165698521..165698604,- | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_3_at_COBLL1_5end | |description=CAGE_peak_3_at_COBLL1_5end | ||
|id=chr2:165698521..165698604,- | |id=chr2:165698521..165698604,- | ||
|ontology_enrichment_celltype=CL:1000507;4.83e-08;10!CL:1000494;4.83e-08;10!CL:1000497;5.58e-08;17!CL:0002518;5.58e-08;17!CL:1000449;1.04e-07;15 | |ontology_enrichment_celltype=CL:0000066!3.93e-13!254 | ||
| | |ontology_enrichment_celltype_v019=CL:1000507;4.83e-08;10!CL:1000494;4.83e-08;10!CL:1000497;5.58e-08;17!CL:0002518;5.58e-08;17!CL:1000449;1.04e-07;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000066,2.08e-09,253;CL:1000507,6.07e-08,10;CL:1000494,6.07e-08,10;CL:1000497,9.36e-08,17;CL:0002518,9.36e-08,17;CL:1000449,2.01e-07,15 | ||
|ontology_enrichment_uberon=UBERON:0000489;1.06e-08;29!UBERON:0002113;4.75e-08;24!UBERON:0011143;4.75e-08;24!UBERON:0004211;4.83e-08;10!UBERON:0009773;4.83e-08;10!UBERON:0001231;4.83e-08;10!UBERON:0004810;4.83e-08;10!UBERON:0006554;5.45e-08;30!UBERON:0001008;5.45e-08;30!UBERON:0006555;1.04e-07;15!UBERON:0004819;1.04e-07;15!UBERON:0001285;1.04e-07;15!UBERON:0007684;1.04e-07;15 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.10e-07!106;DOID:0050687!4.29e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003886!4.66e-11!63;UBERON:0002553!3.37e-10!70;UBERON:0000468!1.01e-09!659;UBERON:0000064!1.03e-09!219;UBERON:0000464!9.73e-09!104;UBERON:0004111!3.78e-08!241;UBERON:0000475!7.18e-08!365;UBERON:0000489!7.45e-08!32;UBERON:0003064!1.09e-07!37;UBERON:0000466!1.20e-07!126;UBERON:0004876!1.30e-07!20;UBERON:0000062!1.65e-07!511;UBERON:0001008!2.18e-07!45;UBERON:0000477!2.67e-07!286;UBERON:0000467!3.89e-07!625;UBERON:0006554!4.05e-07!44;UBERON:0009569!4.19e-07!113;UBERON:0002113!4.87e-07!27;UBERON:0003918!4.87e-07!27;UBERON:0005095!4.87e-07!27;UBERON:0007687!4.87e-07!27;UBERON:0000481!5.75e-07!347;UBERON:0000480!6.12e-07!626;UBERON:0007023!7.30e-07!115;UBERON:0000080!8.17e-07!18;UBERON:0002120!8.17e-07!18;UBERON:0004875!8.17e-07!18;UBERON:0005721!8.17e-07!18;UBERON:0005754!8.17e-07!18;UBERON:0007297!8.17e-07!18;UBERON:0000058!9.05e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;1.06e-08;29!UBERON:0002113;4.75e-08;24!UBERON:0011143;4.75e-08;24!UBERON:0004211;4.83e-08;10!UBERON:0009773;4.83e-08;10!UBERON:0001231;4.83e-08;10!UBERON:0004810;4.83e-08;10!UBERON:0006554;5.45e-08;30!UBERON:0001008;5.45e-08;30!UBERON:0006555;1.04e-07;15!UBERON:0004819;1.04e-07;15!UBERON:0001285;1.04e-07;15!UBERON:0007684;1.04e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,5.98e-10,31;UBERON:0002113,3.86e-09,26;UBERON:0003918,3.86e-09,26;UBERON:0011143,3.86e-09,26;UBERON:0005095,3.86e-09,26;UBERON:0007687,3.86e-09,26;UBERON:0001008,9.29e-09,48;UBERON:0006554,1.92e-08,47;UBERON:0006555,4.41e-08,16;UBERON:0004819,4.41e-08,16;UBERON:0004810,6.07e-08,10;UBERON:0003886,8.56e-08,54;UBERON:0002417,1.95e-07,60;UBERON:0000916,1.95e-07,60;UBERON:0004211,2.01e-07,15;UBERON:0009773,2.01e-07,15;UBERON:0001231,2.01e-07,15;UBERON:0001285,2.01e-07,15;UBERON:0007684,2.01e-07,15;UBERON:0004208,2.01e-07,15;UBERON:0009569,2.21e-07,112;UBERON:0002553,6.53e-07,61 | |||
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| ||
|short_description=p3@COBLL1 | |short_description=p3@COBLL1 | ||
}} | }} |
Latest revision as of 23:18, 17 September 2015
Short description: | p3@COBLL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COBLL1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000392717, ENST00000409184_5end |
EntrezGene: | COBLL1 |
HGNC: | 23571 |
UniProt: | Q53SF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.08e-09 | 253 |
kidney tubule cell | 6.07e-08 | 10 |
nephron tubule epithelial cell | 6.07e-08 | 10 |
kidney cell | 9.36e-08 | 17 |
kidney epithelial cell | 9.36e-08 | 17 |
epithelial cell of nephron | 2.01e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 5.98e-10 | 31 |
kidney | 3.86e-09 | 26 |
kidney mesenchyme | 3.86e-09 | 26 |
upper urinary tract | 3.86e-09 | 26 |
kidney rudiment | 3.86e-09 | 26 |
kidney field | 3.86e-09 | 26 |
renal system | 9.29e-09 | 48 |
urinary system structure | 1.92e-08 | 47 |
excretory tube | 4.41e-08 | 16 |
kidney epithelium | 4.41e-08 | 16 |
nephron tubule epithelium | 6.07e-08 | 10 |
body cavity precursor | 8.56e-08 | 54 |
abdominal segment of trunk | 1.95e-07 | 60 |
abdomen | 1.95e-07 | 60 |
nephron epithelium | 2.01e-07 | 15 |
renal tubule | 2.01e-07 | 15 |
nephron tubule | 2.01e-07 | 15 |
nephron | 2.01e-07 | 15 |
uriniferous tubule | 2.01e-07 | 15 |
nephrogenic mesenchyme | 2.01e-07 | 15 |
subdivision of trunk | 2.21e-07 | 112 |
anatomical cavity | 6.53e-07 | 61 |