FFCP PHASE1:Hg19::chr17:76850688..76850705,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7077 | |EntrezGene=7077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11821 | |HGNC=11821 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC010410_5end | |association_with_transcript=0bp_to_BC010410_5end | ||
|cluster_id=chr17:76850688..76850705,- | |||
|coexpression_cluster_id=C706 | |||
|description=CAGE_peak_9_at_TIMP2_5end | |description=CAGE_peak_9_at_TIMP2_5end | ||
|id=chr17:76850688..76850705,- | |id=chr17:76850688..76850705,- | ||
|ontology_enrichment_celltype=CL:0000055!2.40e-22!180;CL:0000057!2.52e-14!75;CL:0000222!5.99e-09!119;CL:0000048!2.33e-08!430;CL:0000183!5.80e-08!59;CL:0000499!8.96e-08!27;CL:0000723!1.51e-07!436;CL:0000144!2.73e-07!625;CL:0000680!4.01e-07!57;CL:0000056!4.01e-07!57;CL:0000355!4.01e-07!57 | |ontology_enrichment_celltype=CL:0000055!2.40e-22!180;CL:0000057!2.52e-14!75;CL:0000222!5.99e-09!119;CL:0000048!2.33e-08!430;CL:0000183!5.80e-08!59;CL:0000499!8.96e-08!27;CL:0000723!1.51e-07!436;CL:0000144!2.73e-07!625;CL:0000680!4.01e-07!57;CL:0000056!4.01e-07!57;CL:0000355!4.01e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000134;5.89e-11;55!CL:0000723;1.47e-10;61!CL:0000048;3.28e-10;58!CL:0002320;8.24e-08;188!CL:0000034;4.88e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.47e-14,427;CL:0000057,1.11e-13,76;CL:0000723,2.59e-13,433;CL:0000034,2.44e-12,441;CL:0002320,2.20e-10,361;CL:0000134,3.70e-08,354;CL:0000219,4.30e-08,386;CL:0000136,3.77e-07,15;CL:0000192,6.63e-07,43;CL:0000514,6.63e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.24e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.57e-09!83;UBERON:0002329!1.57e-09!83;UBERON:0003077!1.57e-09!83;UBERON:0003059!1.57e-09!83;UBERON:0007282!1.57e-09!83;UBERON:0009618!1.57e-09!83;UBERON:0007285!1.57e-09!83;UBERON:0005256!1.28e-08!143;UBERON:0004290!3.15e-08!70;UBERON:0000468!6.23e-08!659;UBERON:0004923!1.02e-07!57;UBERON:0000926!2.28e-07!448;UBERON:0004120!2.28e-07!448;UBERON:0006603!2.28e-07!448;UBERON:0002385!9.61e-07!63;UBERON:0001015!9.61e-07!63;UBERON:0000383!9.61e-07!63 | |ontology_enrichment_uberon=UBERON:0000914!1.57e-09!83;UBERON:0002329!1.57e-09!83;UBERON:0003077!1.57e-09!83;UBERON:0003059!1.57e-09!83;UBERON:0007282!1.57e-09!83;UBERON:0009618!1.57e-09!83;UBERON:0007285!1.57e-09!83;UBERON:0005256!1.28e-08!143;UBERON:0004290!3.15e-08!70;UBERON:0000468!6.23e-08!659;UBERON:0004923!1.02e-07!57;UBERON:0000926!2.28e-07!448;UBERON:0004120!2.28e-07!448;UBERON:0006603!2.28e-07!448;UBERON:0002385!9.61e-07!63;UBERON:0001015!9.61e-07!63;UBERON:0000383!9.61e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.96e-08;14!UBERON:0004457;2.03e-07;9!UBERON:0000042;2.03e-07;9!UBERON:0002384;4.88e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.91e-09,371;UBERON:0001013,1.98e-08,14;UBERON:0007503,1.09e-07,78;UBERON:0007524,4.48e-07,73;UBERON:0000926,5.03e-07,315;UBERON:0004120,5.03e-07,315;UBERON:0006603,5.03e-07,315;UBERON:0004923,5.66e-07,66;UBERON:0002329,7.32e-07,71;UBERON:0003059,7.32e-07,71;UBERON:0007282,7.32e-07,71;UBERON:0004290,7.32e-07,71;UBERON:0009618,7.32e-07,71;UBERON:0003688,7.68e-07,6;UBERON:0002358,7.68e-07,6;UBERON:0003684,7.68e-07,6;UBERON:0001178,7.68e-07,6 | |||
|phase1_expression=1.63510541343501,4.28201047781966,2.53717927372748,14.0102617694383,7.15137751083661,12.2127393374052,2.53299878168311,3.79031924056099,3.65659879479774,0.245733936501509,0,0.655324116390517,0.527533956456907,3.83675694176145,2.31978163009541,4.03395087871065,3.01347264011988,5.84248072309899,4.39139518911456,0.738726348460727,1.63200552995402,1.56727360739044,0.85870796139317,0.958120975510189,0.251085279189606,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0,0.436194716338694,0.755751887377619,0,0.697287110717054,0,0,0,0.512321413058201,0.236482229888585,0.689491361473237,0,0,0,0,0.449446968890169,0,0.641858054152187,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0.673971786878971,0,0.16072558669708,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,2.68280343881454,0.639312809217652,1.44575660953827,0.50133791063589,6.22840031531542,2.3858578411533,3.89307896242109,0.472674085820339,1.10864698731282,0.614843499851882,0.523916301990851,0,0,0.97364218096405,0.696518949197069,1.32957960518865,0,0,0,0,0.860234595106124,0.347140501607594,0,0.419499436209906,1.10047216776027,0,0.516833518338658,0.71153252537342,0.66944122552934,0.402829317109147,0,1.95249646038536,0,0.81014194788176,0.535798369704479,0.22452937262617,0.900891843866578,0,0,0.549605231791222,0,0,0,0.496971951695318,1.51956613997496,0.264818361626438,5.44989579422746,1.77334191099179,2.80338800071154,0,3.45334567784024,0,0.942974704487816,1.63461903113459,0.908144565869588,2.30470369792,0.937285727335186,1.5608003841516,0.570471821544449,3.13842229158782,0.352303495931295,0.647491777472526,0.702254033511242,1.22492502752936,1.10550885580591,0.413303124703062,1.18800285728205,2.22540236350701,0.910161361938026,2.87447256726495,1.34668891163253,1.12606667884768,0.554128230968366,0.438977620880838,2.45190236639216,1.80285670687916,1.36118619792025,1.79389635688862,2.13557388818567,0.423863802319124,3.00091096084402,1.44273540933814,1.03056216018252,1.11670113798954,0.506328996723799,1.46155507741798,1.26216887122057,0.552299391853796,1.61646056818812,3.90510551768276,1.30977727695932,1.01736355386293,0,0,0,0,0,0,0.207322110030741,0,0,1.56449532329816,4.5026865673502,1.38134921352481,6.03678306441573,7.21879481669586,1.41968160047813,0.505754070234305,0.241011029883482,0.772057809126758,1.52515610864684,0.71181185733329,0.539325232640658,0.98110732562673,0,0,1.40241773803446,0.4115740113314,4.41026134156626,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0,0.0925884451585296,1.3032332212413,0,2.88662684050547,0.34779121492523,0.234817388471643,1.44366447761074,0.925971025153221,1.52203321787679,0,0,0.984868024349589,0.702012795417713,0.891786973732369,0,0.16798212819886,0,0,0,0,0,0,0,0,0,1.8414389344729,1.52795370223311,2.34434894420094,3.4214489204541,3.39330725920968,9.01029173531752,1.14330573052231,0.224262168690721,0.43596006883328,0.4400297149257,0.517086863031111,0,3.381211010224,3.98907174877306,3.12022310734098,0.514414748524284,0,0.532844358032199,2.57360388584666,4.88359444852299,0.823240336780769,1.95441710576241,2.13235169245527,2.37585561880029,1.80863626235752,0.871533458600294,1.89948683245908,6.08118903205952,1.50677127429638,2.10833939483032,1.91699884393266,4.59447743336456,0,2.02693829334611,2.26023954805422,0.179060963239896,0,0,0,0,0.508189248444927,2.60279707715243,0,0.502548796003046,1.27587750330633,0.749007023947182,2.99161459204025,0,2.20844685094452,3.50119364741774,3.25518028439683,1.87173775377726,8.92144943985809,2.36553622550902,1.63997980989798,0.601892199455438,0,5.17365356462525,1.99267679560631,1.10621501125022,2.95404289191482,2.15381273209015,2.05886054286514,0,0.647142602455851,0,0.909382714338778,1.66435439510497,0.604780586659361,2.48107807818777,0.767309866440312,5.61320188866147,1.92208723883551,2.55853624533352,3.86049410744658,7.42090332224955,0.771048469013278,1.06537035187876,0.246381468041427,2.07701771673448,1.16210378459959,0.362578348774867,0.200506470303285,0.0920809889358963,0.918515585316854,2.36718518408732,2.62248829918848,0.451199612907412,0.231046011313244,0.784349769176855,0,0.422206515571503,3.4120015221269,0.680374821106063,1.51141141271498,0,1.08378575017541,3.51182841698397,0,3.3243040357149,1.11937377361089,0,0,2.82095137628028,2.29610251989794,1.95227036798582,0.824328093181778,0.640986253728404,1.07262349896764,0,0,1.6068392984416,1.35339005608971,0.924291702687866,0.614014698904518,0.413509717453592,0.644521469209642,1.16013355131383,0.170453254832202,0.801288320820636,0,0,0,0,3.253918845081,1.25924938732256,0,1.54016790088044,0,0,0.55597265731176,0,1.48863347743867,0,3.0500831027812,2.55897791311334,2.1396949401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|phase1_expression=1.63510541343501,4.28201047781966,2.53717927372748,14.0102617694383,7.15137751083661,12.2127393374052,2.53299878168311,3.79031924056099,3.65659879479774,0.245733936501509,0,0.655324116390517,0.527533956456907,3.83675694176145,2.31978163009541,4.03395087871065,3.01347264011988,5.84248072309899,4.39139518911456,0.738726348460727,1.63200552995402,1.56727360739044,0.85870796139317,0.958120975510189,0.251085279189606,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0,0.436194716338694,0.755751887377619,0,0.697287110717054,0,0,0,0.512321413058201,0.236482229888585,0.689491361473237,0,0,0,0,0.449446968890169,0,0.641858054152187,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0.673971786878971,0,0.16072558669708,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,2.68280343881454,0.639312809217652,1.44575660953827,0.50133791063589,6.22840031531542,2.3858578411533,3.89307896242109,0.472674085820339,1.10864698731282,0.614843499851882,0.523916301990851,0,0,0.97364218096405,0.696518949197069,1.32957960518865,0,0,0,0,0.860234595106124,0.347140501607594,0,0.419499436209906,1.10047216776027,0,0.516833518338658,0.71153252537342,0.66944122552934,0.402829317109147,0,1.95249646038536,0,0.81014194788176,0.535798369704479,0.22452937262617,0.900891843866578,0,0,0.549605231791222,0,0,0,0.496971951695318,1.51956613997496,0.264818361626438,5.44989579422746,1.77334191099179,2.80338800071154,0,3.45334567784024,0,0.942974704487816,1.63461903113459,0.908144565869588,2.30470369792,0.937285727335186,1.5608003841516,0.570471821544449,3.13842229158782,0.352303495931295,0.647491777472526,0.702254033511242,1.22492502752936,1.10550885580591,0.413303124703062,1.18800285728205,2.22540236350701,0.910161361938026,2.87447256726495,1.34668891163253,1.12606667884768,0.554128230968366,0.438977620880838,2.45190236639216,1.80285670687916,1.36118619792025,1.79389635688862,2.13557388818567,0.423863802319124,3.00091096084402,1.44273540933814,1.03056216018252,1.11670113798954,0.506328996723799,1.46155507741798,1.26216887122057,0.552299391853796,1.61646056818812,3.90510551768276,1.30977727695932,1.01736355386293,0,0,0,0,0,0,0.207322110030741,0,0,1.56449532329816,4.5026865673502,1.38134921352481,6.03678306441573,7.21879481669586,1.41968160047813,0.505754070234305,0.241011029883482,0.772057809126758,1.52515610864684,0.71181185733329,0.539325232640658,0.98110732562673,0,0,1.40241773803446,0.4115740113314,4.41026134156626,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0,0.0925884451585296,1.3032332212413,0,2.88662684050547,0.34779121492523,0.234817388471643,1.44366447761074,0.925971025153221,1.52203321787679,0,0,0.984868024349589,0.702012795417713,0.891786973732369,0,0.16798212819886,0,0,0,0,0,0,0,0,0,1.8414389344729,1.52795370223311,2.34434894420094,3.4214489204541,3.39330725920968,9.01029173531752,1.14330573052231,0.224262168690721,0.43596006883328,0.4400297149257,0.517086863031111,0,3.381211010224,3.98907174877306,3.12022310734098,0.514414748524284,0,0.532844358032199,2.57360388584666,4.88359444852299,0.823240336780769,1.95441710576241,2.13235169245527,2.37585561880029,1.80863626235752,0.871533458600294,1.89948683245908,6.08118903205952,1.50677127429638,2.10833939483032,1.91699884393266,4.59447743336456,0,2.02693829334611,2.26023954805422,0.179060963239896,0,0,0,0,0.508189248444927,2.60279707715243,0,0.502548796003046,1.27587750330633,0.749007023947182,2.99161459204025,0,2.20844685094452,3.50119364741774,3.25518028439683,1.87173775377726,8.92144943985809,2.36553622550902,1.63997980989798,0.601892199455438,0,5.17365356462525,1.99267679560631,1.10621501125022,2.95404289191482,2.15381273209015,2.05886054286514,0,0.647142602455851,0,0.909382714338778,1.66435439510497,0.604780586659361,2.48107807818777,0.767309866440312,5.61320188866147,1.92208723883551,2.55853624533352,3.86049410744658,7.42090332224955,0.771048469013278,1.06537035187876,0.246381468041427,2.07701771673448,1.16210378459959,0.362578348774867,0.200506470303285,0.0920809889358963,0.918515585316854,2.36718518408732,2.62248829918848,0.451199612907412,0.231046011313244,0.784349769176855,0,0.422206515571503,3.4120015221269,0.680374821106063,1.51141141271498,0,1.08378575017541,3.51182841698397,0,3.3243040357149,1.11937377361089,0,0,2.82095137628028,2.29610251989794,1.95227036798582,0.824328093181778,0.640986253728404,1.07262349896764,0,0,1.6068392984416,1.35339005608971,0.924291702687866,0.614014698904518,0.413509717453592,0.644521469209642,1.16013355131383,0.170453254832202,0.801288320820636,0,0,0,0,3.253918845081,1.25924938732256,0,1.54016790088044,0,0,0.55597265731176,0,1.48863347743867,0,3.0500831027812,2.55897791311334,2.1396949401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| ||
|short_description=p9@TIMP2 | |short_description=p9@TIMP2 | ||
}} | }} |
Latest revision as of 23:09, 17 September 2015
Short description: | p9@TIMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TIMP2_5end |
Coexpression cluster: | C706_Adipocyte_Preadipocyte_tenocyte_leiomyoma_chorionic_Olfactory_Hair |
Association with transcript: | 0bp_to_BC010410_5end |
EntrezGene: | TIMP2 |
HGNC: | 11821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.47e-14 | 427 |
fibroblast | 1.11e-13 | 76 |
somatic stem cell | 2.59e-13 | 433 |
stem cell | 2.44e-12 | 441 |
connective tissue cell | 2.20e-10 | 361 |
mesenchymal cell | 3.70e-08 | 354 |
motile cell | 4.30e-08 | 386 |
fat cell | 3.77e-07 | 15 |
smooth muscle cell | 6.63e-07 | 43 |
smooth muscle myoblast | 6.63e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.91e-09 | 371 |
adipose tissue | 1.98e-08 | 14 |
epithelial vesicle | 1.09e-07 | 78 |
dense mesenchyme tissue | 4.48e-07 | 73 |
mesoderm | 5.03e-07 | 315 |
mesoderm-derived structure | 5.03e-07 | 315 |
presumptive mesoderm | 5.03e-07 | 315 |
organ component layer | 5.66e-07 | 66 |
somite | 7.32e-07 | 71 |
presomitic mesoderm | 7.32e-07 | 71 |
presumptive segmental plate | 7.32e-07 | 71 |
dermomyotome | 7.32e-07 | 71 |
trunk paraxial mesoderm | 7.32e-07 | 71 |
omentum | 7.68e-07 | 6 |
peritoneum | 7.68e-07 | 6 |
abdominal cavity | 7.68e-07 | 6 |
visceral peritoneum | 7.68e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.24e-07 | 14 |