FFCP PHASE1:Hg19::chr11:393428..393451,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11187 | |EntrezGene=11187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9025 | |HGNC=9025 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKC4 | |UniProt=E9PKC4 | ||
|association_with_transcript=0bp_to_ENST00000533249_5end | |association_with_transcript=0bp_to_ENST00000533249_5end | ||
|cluster_id=chr11:393428..393451,+ | |||
|description=CAGE_peak_6_at_PKP3_5end | |description=CAGE_peak_6_at_PKP3_5end | ||
|id=chr11:393428..393451,+ | |id=chr11:393428..393451,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.26e-24!254;CL:0000548!6.87e-13!679;CL:0000004!6.87e-13!679;CL:0000255!6.87e-13!679;CL:0000012!1.66e-12!682;CL:0002076!2.21e-12!43;CL:0000223!4.65e-10!59;CL:0000063!1.09e-08!578;CL:0000220!2.50e-08!246;CL:0002321!4.70e-08!248;CL:0000003!8.14e-08!722;CL:0000076!1.66e-07!62;CL:0002251!3.30e-07!21 | |ontology_enrichment_celltype=CL:0000066!3.26e-24!254;CL:0000548!6.87e-13!679;CL:0000004!6.87e-13!679;CL:0000255!6.87e-13!679;CL:0000012!1.66e-12!682;CL:0002076!2.21e-12!43;CL:0000223!4.65e-10!59;CL:0000063!1.09e-08!578;CL:0000220!2.50e-08!246;CL:0002321!4.70e-08!248;CL:0000003!8.14e-08!722;CL:0000076!1.66e-07!62;CL:0002251!3.30e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002577;6.44e-17;3!CL:0000349;1.11e-09;19!CL:0002541;4.85e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,3.62e-17,3;CL:0000349,7.48e-10,19;CL:0002541,3.31e-08,3;CL:0000066,4.01e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008425;7.13e-07;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.18e-16!143;DOID:305!1.50e-16!106;DOID:14566!1.77e-12!239;DOID:162!2.76e-12!235;DOID:299!8.28e-07!25 | |ontology_enrichment_disease=DOID:0050687!1.18e-16!143;DOID:305!1.50e-16!106;DOID:14566!1.77e-12!239;DOID:162!2.76e-12!235;DOID:299!8.28e-07!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.61e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.95e-11!169;UBERON:0000925!1.95e-11!169;UBERON:0006595!1.95e-11!169;UBERON:0003102!2.30e-11!95;UBERON:0001004!2.57e-10!72;UBERON:0000161!9.28e-09!35;UBERON:0001007!1.72e-08!155;UBERON:0001555!1.72e-08!155;UBERON:0007026!1.72e-08!155;UBERON:0000077!1.91e-07!130;UBERON:0005631!2.14e-07!14;UBERON:0000158!2.14e-07!14;UBERON:0000166!3.34e-07!21;UBERON:0003124!9.68e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;8.16e-13;4!UBERON:0003124;4.85e-08;3!UBERON:0000920;4.85e-08;3!UBERON:0000478;1.57e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.96e-19,7;UBERON:0005631,1.34e-13,14;UBERON:0000158,1.34e-13,14;UBERON:0001987,5.31e-13,4;UBERON:0004340,5.31e-13,4;UBERON:0000920,3.31e-08,3;UBERON:0000478,1.16e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.973269740605272,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0.872188104285069,0.496971951695318,0,0.397227542439656,0.286836620748814,0,0,1.06748995729705,0.49333509683432,0.311211035399766,0.134710672069688,0,0,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0.204154171254893,0.61417158655884,0.516628905878827,1.18800285728205,0,0,0,0.168336113954066,0.500474079487857,0,0,0,0,0.113432183160021,0.717558542755448,0.427114777637135,0.211931901159562,0.900273288253207,0.515262646192195,0.515281080091258,0.18611685633159,0.168776332241266,0.292311015483596,0.504867548488229,0.368199594569197,0.484938170456436,0,0.503760491138201,0,0.773043412653187,0.545492241181669,1.43402297694502,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.946454400318751,1.01150814046861,0.241011029883482,1.32352767278873,0,0.237270619111097,1.07865046528132,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0.245976877086227,0,1.20725313949488,1.1240175325762,0.201057944823262,0.277765335475589,0.977424915930974,0,0,0.231860809950154,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,1.00789276919316,0.425325291727159,0.358234090811393,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.514414748524284,0,0.799266537048298,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.99972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.713715955188647,0.315404830067869,0,0,0,0,0,0,0.434418072340414,0.587403472388222,0,0,0,0,2.72814814301633,3.32870879020994,1.5119514666484,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.328508624055237,0,0.232420756919918,0.241718899183244,0.802025881213139,1.01289087829486,0.229628896329213,0.182091168006717,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0.895499018888713,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0.650060246036521,0,0.290012154876366,0,0.15350367472613,0,0,0,0,0.0890320356467374,0.661139661443912,0,1.14851441245126,0.910420027699949,0,0.31481234683064,0.6970372701606,0.308033580176089,0.532306030317022,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0,0,0.235624804691373,0.202182481573316,0,0.421258456238981,0.975267478179181,0,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0.563391205064483,0.143411352204052,0.491245205065606,0,0,0,0.329294892959902,0,0.349934720244983,0.192444225451024,0,0,0,0,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,2.86493381685228,0.593929361665277,0.614321404198464,0,0,1.11308705022906,0.494411622680279,0.211125408127993,0,0,0,0.818149460017238,0,0.622079175323615,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,2.0115799999125,0,1.137934482855,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.975966209950223,0.230850775511391,0,0.23056390438806,0.359030577639089,1.08647371922008,2.55200927785536,0.366390373607449,1.5991043280559,0,0,0,0.451191321234361,0.392125068635479,0.671286347903371,0.37950746544837,0,0.632994193584081,0.326465616318295,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,2.64793564700399,1.2557316736289,0,0.569219092059585,1.38674673013139,0.347119476670262,0.391969589657511,0.69647365264322,0.17472666824203,0,0.19351266257817,0.730893170861856,0.574808199372465,0.290967049465258,0,0.225980740780532,0.274083849293502,0.397429223405979,0,0.195551382734803,0.320635281006135,0,0,0,0,0,0.14405479798815,0,0.707082103850386,0.271808412147228,0.418411385249333,0.407992870545287,0.288950589901519,0,0,0,0.859530882839914,0,0,0,0,0.399358000997982,0,0,0,0,0,0.236349546921671,0.164831716762333,0.471824806979294,0,0,0,0,0,0,0,0,1.5476039091159,0,0,0,0,0.316801009558219,1.25501137532991,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0.513260513652988,0.704815022316672,0,0.157204305099666,0,0,0,0,2.55336503108073,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.249960815924213,0,0,0.470531639396343,0,0.144921028610825,0.149254802886874,1.16856654923612,0.554805861502613,0,0,0,0,0.151230923763239,0.310874401165561,0,0.477890301491107,0,0.155262956876259,0,0,0.521745061811734,0.601030435988874,1.90402606084398,0,0,0.322231671127465,0,0.398095888698616,0,0,0.336749488765919,0,0.5778594912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| ||
|short_description=p6@PKP3 | |short_description=p6@PKP3 | ||
}} | }} |
Latest revision as of 22:43, 17 September 2015
Short description: | p6@PKP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PKP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000533249_5end |
EntrezGene: | PKP3 |
HGNC: | 9025 |
UniProt: | E9PKC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 3.62e-17 | 3 |
extraembryonic cell | 7.48e-10 | 19 |
chorionic membrane mesenchymal stem cell | 3.31e-08 | 3 |
epithelial cell | 4.01e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.96e-19 | 7 |
extraembryonic membrane | 1.34e-13 | 14 |
membranous layer | 1.34e-13 | 14 |
placenta | 5.31e-13 | 4 |
allantois | 5.31e-13 | 4 |
egg chorion | 3.31e-08 | 3 |
extraembryonic structure | 1.16e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.61e-07 | 143 |