FFCP PHASE1:Hg19::chr1:38324636..38324647,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4520 | |EntrezGene=4520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7428 | |HGNC=7428 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-425bp_to_ENST00000468190_5end | |association_with_transcript=-425bp_to_ENST00000468190_5end | ||
|cluster_id=chr1:38324636..38324647,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_MTF1_5end | |description=CAGE_peak_3_at_MTF1_5end | ||
|id=chr1:38324636..38324647,- | |id=chr1:38324636..38324647,- | ||
|ontology_enrichment_celltype=CL:0002057!2.52e-92!42;CL:0000860!8.23e-86!45;CL:0000766!1.15e-64!76;CL:0002194!1.01e-58!63;CL:0000576!1.01e-58!63;CL:0000040!1.01e-58!63;CL:0000559!1.01e-58!63;CL:0002009!8.89e-57!65;CL:0000839!2.15e-52!70;CL:0000557!1.37e-51!71;CL:0000763!3.47e-42!112;CL:0000049!3.47e-42!112;CL:0000738!1.87e-37!140;CL:0002087!1.35e-33!119;CL:0002031!5.08e-32!124;CL:0000037!1.76e-31!172;CL:0000566!1.76e-31!172;CL:0002032!6.82e-31!165;CL:0000837!6.82e-31!165;CL:0000988!2.01e-29!182;CL:0000134!6.14e-13!358;CL:0000771!7.44e-13!2;CL:0002320!1.45e-12!365;CL:0000094!9.81e-12!8;CL:0000219!2.96e-11!390;CL:0000048!1.11e-09!430;CL:0000723!1.86e-09!436;CL:0000034!3.62e-09!444;CL:0000081!1.48e-08!11 | |ontology_enrichment_celltype=CL:0002057!2.52e-92!42;CL:0000860!8.23e-86!45;CL:0000766!1.15e-64!76;CL:0002194!1.01e-58!63;CL:0000576!1.01e-58!63;CL:0000040!1.01e-58!63;CL:0000559!1.01e-58!63;CL:0002009!8.89e-57!65;CL:0000839!2.15e-52!70;CL:0000557!1.37e-51!71;CL:0000763!3.47e-42!112;CL:0000049!3.47e-42!112;CL:0000738!1.87e-37!140;CL:0002087!1.35e-33!119;CL:0002031!5.08e-32!124;CL:0000037!1.76e-31!172;CL:0000566!1.76e-31!172;CL:0002032!6.82e-31!165;CL:0000837!6.82e-31!165;CL:0000988!2.01e-29!182;CL:0000134!6.14e-13!358;CL:0000771!7.44e-13!2;CL:0002320!1.45e-12!365;CL:0000094!9.81e-12!8;CL:0000219!2.96e-11!390;CL:0000048!1.11e-09!430;CL:0000723!1.86e-09!436;CL:0000034!3.62e-09!444;CL:0000081!1.48e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.39e-39;33!CL:0002057;2.39e-39;33!CL:0000771;8.20e-37;2!CL:0000473;2.00e-26;39!CL:0000234;2.00e-26;39!CL:0000576;2.61e-20;48!CL:0000766;3.70e-14;69!CL:0000094;5.54e-10;8!CL:0000763;2.83e-09;100!CL:0000081;1.67e-07;11!CL:0002087;2.95e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,8.20e-37,2;CL:0000860,4.06e-34,42;CL:0002057,4.06e-34,42;CL:0000473,8.29e-30,48;CL:0000234,8.29e-30,48;CL:0000766,3.58e-29,72;CL:0002194,9.15e-24,59;CL:0000576,9.15e-24,59;CL:0000040,9.15e-24,59;CL:0000559,9.15e-24,59;CL:0002009,5.52e-23,61;CL:0000839,3.09e-21,66;CL:0000557,6.45e-21,67;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0000738,2.78e-15,136;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0002087,4.86e-12,115;CL:0000988,1.32e-11,177;CL:0002031,1.62e-11,120;CL:0000094,5.54e-10,8;CL:0000081,1.67e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.50e-49!80;UBERON:0001474!4.28e-45!86;UBERON:0004765!1.24e-37!101;UBERON:0001434!1.24e-37!101;UBERON:0002390!3.26e-37!102;UBERON:0003061!3.26e-37!102;UBERON:0002193!2.03e-33!112;UBERON:0002405!2.08e-32!115;UBERON:0002204!1.31e-20!167;UBERON:0003081!5.29e-16!216;UBERON:0002384!4.65e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.04e-18,76;UBERON:0001474,4.76e-17,82;UBERON:0004765,1.67e-15,90;UBERON:0002405,5.43e-15,93;UBERON:0002390,3.31e-14,98;UBERON:0003061,3.31e-14,98;UBERON:0001434,6.49e-14,100;UBERON:0002193,7.50e-13,108;UBERON:0002204,4.13e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0.651032612147555,0,0,0,0,0,0,0.929716147622738,1.23350366406548,0.309706370895104,1.43846196161075,0.256160706529101,0.47296445977717,0.344745680736619,0.645484683583826,2.70852973188684,0.376484679085209,0.272906150057846,0.674170453335254,0.918251677112708,0.962787081228281,0.639337125799041,0.329851300186716,0,0,9.57690487474327,7.94339314567596,4.35975574296902,0,0,0,5.44859552370032,6.2607198117886,7.59509729858123,0,0.637812899895131,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0.651032612147555,0,0,0,0,0,0,0.929716147622738,1.23350366406548,0.309706370895104,1.43846196161075,0.256160706529101,0.47296445977717,0.344745680736619,0.645484683583826,2.70852973188684,0.376484679085209,0.272906150057846,0.674170453335254,0.918251677112708,0.962787081228281,0.639337125799041,0.329851300186716,0,0,9.57690487474327,7.94339314567596,4.35975574296902,0,0,0,5.44859552370032,6.2607198117886,7.59509729858123,0,0.637812899895131,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@MTF1 | |short_description=p3@MTF1 | ||
}} | }} |
Latest revision as of 22:37, 17 September 2015
Short description: | p3@MTF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MTF1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -425bp_to_ENST00000468190_5end |
EntrezGene: | MTF1 |
HGNC: | 7428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 8.20e-37 | 2 |
classical monocyte | 4.06e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.06e-34 | 42 |
defensive cell | 8.29e-30 | 48 |
phagocyte | 8.29e-30 | 48 |
myeloid leukocyte | 3.58e-29 | 72 |
monopoietic cell | 9.15e-24 | 59 |
monocyte | 9.15e-24 | 59 |
monoblast | 9.15e-24 | 59 |
promonocyte | 9.15e-24 | 59 |
macrophage dendritic cell progenitor | 5.52e-23 | 61 |
myeloid lineage restricted progenitor cell | 3.09e-21 | 66 |
granulocyte monocyte progenitor cell | 6.45e-21 | 67 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
leukocyte | 2.78e-15 | 136 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
nongranular leukocyte | 4.86e-12 | 115 |
hematopoietic cell | 1.32e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 1.62e-11 | 120 |
granulocyte | 5.54e-10 | 8 |
blood cell | 1.67e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.04e-18 | 76 |
bone element | 4.76e-17 | 82 |
skeletal element | 1.67e-15 | 90 |
immune system | 5.43e-15 | 93 |
hematopoietic system | 3.31e-14 | 98 |
blood island | 3.31e-14 | 98 |
skeletal system | 6.49e-14 | 100 |
hemolymphoid system | 7.50e-13 | 108 |
musculoskeletal system | 4.13e-08 | 167 |