FFCP PHASE1:Hg19::chr2:63816295..63816356,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4190 | |EntrezGene=4190 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6970 | |HGNC=6970 | ||
|TSSclassifier=strong | |||
|UniProt=C9JF79,F5H098,B7Z3I7,P40925,B4DUN2 | |UniProt=C9JF79,F5H098,B7Z3I7,P40925,B4DUN2 | ||
|association_with_transcript=10bp_to_,-10bp_to_ENST00000432309,ENST00000539945,NM_001199111,NM_001199112,uc010ypv.1,uc010ypw.1_5end | |association_with_transcript=10bp_to_,-10bp_to_ENST00000432309,ENST00000539945,NM_001199111,NM_001199112,uc010ypv.1,uc010ypw.1_5end | ||
|cluster_id=chr2:63816295..63816356,+ | |||
|coexpression_cluster_id=C4240 | |||
|description=CAGE_peak_4_at_MDH1_5end | |description=CAGE_peak_4_at_MDH1_5end | ||
|id=chr2:63816295..63816356,+ | |id=chr2:63816295..63816356,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;9.09e-07;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.76e-11;82!UBERON:0006215;8.61e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.47e-19!69;UBERON:0006238!3.47e-19!69;UBERON:0001049!1.50e-18!57;UBERON:0005068!1.50e-18!57;UBERON:0006241!1.50e-18!57;UBERON:0007135!1.50e-18!57;UBERON:0002616!4.67e-18!59;UBERON:0001017!7.85e-18!82;UBERON:0002780!1.01e-16!41;UBERON:0001890!1.01e-16!41;UBERON:0006240!1.01e-16!41;UBERON:0005743!3.33e-16!86;UBERON:0003080!6.83e-16!42;UBERON:0003075!1.57e-15!86;UBERON:0007284!1.57e-15!86;UBERON:0007023!3.28e-14!115;UBERON:0002346!3.39e-14!90;UBERON:0002020!5.24e-14!34;UBERON:0003528!5.24e-14!34;UBERON:0001893!7.31e-14!34;UBERON:0001869!1.19e-13!32;UBERON:0000073!3.10e-13!94;UBERON:0001016!3.10e-13!94;UBERON:0002791!3.71e-13!33;UBERON:0000153!3.96e-12!129;UBERON:0007811!3.96e-12!129;UBERON:0000033!4.78e-12!123;UBERON:0003056!1.64e-10!61;UBERON:0004121!2.39e-10!169;UBERON:0002619!4.00e-10!22;UBERON:0000956!8.65e-10!25;UBERON:0000203!8.65e-10!25;UBERON:0000924!1.04e-09!173;UBERON:0006601!1.04e-09!173;UBERON:0001950!6.10e-09!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.62e-31;22!UBERON:0001869;2.17e-30;32!UBERON:0003528;4.71e-30;34!UBERON:0002020;4.71e-30;34!UBERON:0001893;6.40e-28;34!UBERON:0002791;1.09e-27;32!UBERON:0001950;3.15e-27;20!UBERON:0000956;5.75e-27;25!UBERON:0000203;5.75e-27;25!UBERON:0000073;6.75e-23;53!UBERON:0002616;6.75e-23;53!UBERON:0002780;3.53e-22;41!UBERON:0001890;3.53e-22;41!UBERON:0000955;8.77e-16;68!UBERON:0000200;1.45e-15;6!UBERON:0001017;2.66e-14;75!UBERON:0007023;3.29e-13;114!UBERON:0004733;8.76e-12;12!UBERON:0002028;8.76e-12;12!UBERON:0004732;9.22e-11;13!UBERON:0001016;9.63e-11;83!UBERON:0002298;3.29e-10;6!UBERON:0002680;2.57e-09;9!UBERON:0001895;2.57e-09;9!UBERON:0000125;8.12e-09;9!UBERON:0002308;8.12e-09;9!UBERON:0001872;9.62e-09;5!UBERON:0001870;1.00e-08;3!UBERON:0002021;1.63e-08;5!UBERON:0000988;2.94e-08;3!UBERON:0000349;7.29e-08;5!UBERON:0004151;8.61e-08;3!UBERON:0007100;9.65e-08;25!UBERON:0003978;1.26e-07;3!UBERON:0000946;1.26e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.14e-43,53;UBERON:0002616,1.14e-43,53;UBERON:0001049,1.84e-43,56;UBERON:0005068,1.84e-43,56;UBERON:0006241,1.84e-43,56;UBERON:0007135,1.84e-43,56;UBERON:0007023,7.95e-43,114;UBERON:0000955,5.40e-36,68;UBERON:0006238,5.40e-36,68;UBERON:0003528,1.48e-34,34;UBERON:0002020,1.48e-34,34;UBERON:0001869,3.68e-34,32;UBERON:0002780,4.38e-33,41;UBERON:0001890,4.38e-33,41;UBERON:0003080,4.38e-33,41;UBERON:0006240,4.38e-33,41;UBERON:0001017,1.55e-32,81;UBERON:0003075,3.53e-32,82;UBERON:0007284,3.53e-32,82;UBERON:0001893,8.15e-32,34;UBERON:0002619,2.16e-31,22;UBERON:0002791,8.41e-31,32;UBERON:0002346,3.39e-30,86;UBERON:0001016,2.79e-28,89;UBERON:0010314,5.03e-28,132;UBERON:0001950,1.63e-27,20;UBERON:0000956,3.66e-27,25;UBERON:0000203,3.66e-27,25;UBERON:0010371,3.36e-26,104;UBERON:0003056,5.78e-20,61;UBERON:0004121,2.56e-16,171;UBERON:0000924,2.56e-16,171;UBERON:0006601,2.56e-16,171;UBERON:0000200,1.59e-15,6;UBERON:0000025,1.98e-13,192;UBERON:0004733,1.42e-11,12;UBERON:0002028,1.42e-11,12;UBERON:0007277,1.42e-11,12;UBERON:0003076,2.84e-11,15;UBERON:0003057,2.84e-11,15;UBERON:0004111,1.39e-10,240;UBERON:0004732,1.43e-10,13;UBERON:0002298,3.78e-10,6;UBERON:0011216,6.75e-10,223;UBERON:0002680,3.54e-09,9;UBERON:0001895,3.54e-09,9;UBERON:0010092,3.54e-09,9;UBERON:0000125,8.19e-09,9;UBERON:0002308,8.19e-09,9;UBERON:0001872,8.97e-09,5;UBERON:0001870,9.14e-09,3;UBERON:0002021,1.41e-08,5;UBERON:0000988,2.68e-08,3;UBERON:0004151,6.75e-08,3;UBERON:0000349,8.21e-08,5;UBERON:0003978,1.62e-07,3;UBERON:0009751,1.62e-07,3;UBERON:0000946,1.62e-07,3;UBERON:0002523,1.62e-07,3;UBERON:0005983,1.62e-07,3;UBERON:0002165,1.62e-07,3;UBERON:0002062,1.62e-07,3;UBERON:0007280,1.62e-07,3;UBERON:0000483,1.94e-07,306;UBERON:0000119,2.95e-07,309;UBERON:0007100,5.10e-07,27 | |||
|phase1_expression=0.363356758541113,1.2846031433459,0.986680828671798,0,2.23480547213644,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.273748850145768,0,0.534893840235659,0.903106483949403,0.629686250509434,0,0,0,0.919421224478927,0,0,0.0774672005803016,0,0,0.553995408531877,0,0.217010870715852,0,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.411202997999018,0,0.32592226663359,0,0,0.445641827540694,0,0,0.270803863765016,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,1.5905718941022,0,0,0,0.087834785693126,0.523916301990851,0,0.370784442784429,0.324547393654683,1.0447784237956,1.32957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.662045904066094,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0.624320153660641,0.570471821544449,0.298897361103602,0.23486899728753,0.323745888736263,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.340296549480063,0,0.213557388818567,0.211931901159562,0,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.276149695926898,0.484938170456436,0.355009592516614,0.10075209822764,0.339121184620975,0.57978255948989,0.818238361772504,0.286804595389004,0,0.265059536642971,0.348581828608555,0.207322110030741,0.756962552626885,0.36497735907583,1.56449532329816,0,0,0,0,0.946454400318751,0.674338760312407,0.723033089650446,0.661763836394364,1.08939722046203,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0,1.40402559083543,0.297262324577456,0,0.503946384596579,0.425325291727159,0.626909658919938,0.290633938513962,0.383382679165211,0.985326475791887,0,0.207328115540772,0.144119953416961,0,0.126995788584338,0,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0.434343920002738,0,0.358121926479791,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0.30239029332968,0,0.61384789315225,0,0.128139149255701,1.02341449813341,0.804269605718038,1.48418066444991,0.154209693802656,0.355123450626254,0.246381468041427,0,0.697262270759755,0,0.601519410909855,0.0920809889358963,0.459257792658427,0,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.41254749960294,0.574265537996172,1.30012049207304,1.6068392984416,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0.255679882248303,0,0.165284915360978,0.384380134730212,0,0.2023155617111,0.929691098594572,0.31481234683064,0,0,0.532306030317022,0,0,0,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0.92947049429925,0.281695602532241,1.00387946542836,0.785992328104969,0.35667105148125,0.354761064070598,0.422215270595328,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0,0.142283686696828,0.478278818186467,0.199579371432817,0,0,0.324621940274555,0,0.228234679033192,0.626719583092093,0,0,0.1605880751037,0,0.425846237690326,0,0,0.894704431569664,0.667396566847634,0.976940477010201,0.278406173895242,0,0,0,0,0,1.75809815126273,0,0.111443384277478,0,0.47748896947538,0,0,0.994147647766298,1.54736358051564,0.111308705022906,0.659215496907038,0,0,0,0.251932747854276,0.102268682502155,0.492339221844278,0,0.359473404589307,0.179021174675609,0,0.197286811273867,0,0,1.93866549219044,4.54563680993071,0,0,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0.344743373241465,0,0.173624994933292,1.77148277162768,0.844175070377856,3.05163472634166,1.21637185924347,1.18219047581419,1.97446857438575,0.435753854075961,1.39423744278603,0,0.113942055847001,0.922255617552241,0.538545866458633,0.434589487688032,0,0.274792780205587,0,1.02193298195737,0.156980256395025,0.332423363800313,0.225595660617181,0.392125068635479,0.167821586975843,0.37950746544837,0.158936578980379,0,0,0.282706142867882,0,0,0.176915129006678,0.611030144933625,3.85477467284809,3.08909847366257,3.55034628318548,0.539209063845416,2.40773294189637,2.57690890297873,0,0.391329237864179,0,0,0,0,0.252746318513952,0.751617097072463,0.2073763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| ||
|short_description=p4@MDH1 | |short_description=p4@MDH1 | ||
}} | }} |
Latest revision as of 22:36, 17 September 2015
Short description: | p4@MDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MDH1_5end |
Coexpression cluster: | C4240_Dendritic_left_mature_heart_medial_occipital_Macrophage |
Association with transcript: | 10bp_to_, -10bp_to_ENST00000432309, ENST00000539945, NM_001199111, NM_001199112, uc010ypv.1, uc010ypw.1_5end |
EntrezGene: | MDH1 |
HGNC: | 6970 |
UniProt: | C9JF79F5H098B7Z3I7P40925B4DUN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data