FFCP PHASE1:Hg19::chr1:159174701..159174727,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:159174701..159174727,+
|short_description=p2@DARC
|description=CAGE_peak_2_at_DARC_5end
|association_with_transcript=0bp_to_ENST00000435307_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2532 | |EntrezGene=2532 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4035 | |HGNC=4035 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JY94 | |UniProt=Q5JY94 | ||
|association_with_transcript=0bp_to_ENST00000435307_5end | |||
|cluster_id=chr1:159174701..159174727,+ | |||
|coexpression_cluster_id=C1251 | |||
|description=CAGE_peak_2_at_DARC_5end | |||
|id=chr1:159174701..159174727,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.93e-08;65!UBERON:0004872;2.61e-07;7!UBERON:0006601;6.93e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.42e-112!115;UBERON:0001049!1.09e-28!57;UBERON:0005068!1.09e-28!57;UBERON:0006241!1.09e-28!57;UBERON:0007135!1.09e-28!57;UBERON:0002616!1.01e-22!59;UBERON:0003075!1.09e-22!86;UBERON:0007284!1.09e-22!86;UBERON:0003080!9.25e-22!42;UBERON:0002346!5.19e-21!90;UBERON:0002780!1.11e-20!41;UBERON:0001890!1.11e-20!41;UBERON:0006240!1.11e-20!41;UBERON:0001017!3.53e-20!82;UBERON:0005743!1.07e-19!86;UBERON:0000955!1.15e-19!69;UBERON:0006238!1.15e-19!69;UBERON:0002020!5.51e-18!34;UBERON:0003528!5.51e-18!34;UBERON:0001893!9.06e-18!34;UBERON:0000073!1.47e-17!94;UBERON:0001016!1.47e-17!94;UBERON:0002791!3.89e-17!33;UBERON:0001869!7.14e-16!32;UBERON:0003056!4.07e-13!61;UBERON:0002619!5.28e-13!22;UBERON:0000153!5.78e-13!129;UBERON:0007811!5.78e-13!129;UBERON:0001950!7.84e-13!20;UBERON:0000033!2.83e-11!123;UBERON:0000956!6.41e-11!25;UBERON:0000203!6.41e-11!25;UBERON:0004111!8.88e-11!241;UBERON:0004121!3.71e-10!169;UBERON:0002298!5.37e-10!8;UBERON:0000924!1.38e-09!173;UBERON:0006601!1.38e-09!173;UBERON:0000477!1.62e-09!286;UBERON:0000025!2.27e-09!194;UBERON:0002308!3.08e-09!9;UBERON:0000125!3.08e-09!9;UBERON:0002420!3.42e-09!9;UBERON:0007245!3.42e-09!9;UBERON:0010009!3.42e-09!9;UBERON:0010011!3.42e-09!9;UBERON:0000454!3.42e-09!9;UBERON:0001871!1.33e-08!7;UBERON:0003076!4.63e-08!15;UBERON:0003057!4.63e-08!15;UBERON:0009663!1.78e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.57e-21;114!UBERON:0002298;2.49e-07;6!UBERON:0004151;2.57e-07;3!UBERON:0000178;3.96e-07;15!UBERON:0000179;3.96e-07;15!UBERON:0000463;3.96e-07;15!UBERON:0002784;4.51e-07;4!UBERON:0003978;7.75e-07;3!UBERON:0000946;7.75e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.54e-93,114;UBERON:0001049,1.21e-09,56;UBERON:0005068,1.21e-09,56;UBERON:0006241,1.21e-09,56;UBERON:0007135,1.21e-09,56;UBERON:0011216,8.59e-09,223;UBERON:0003075,9.57e-09,82;UBERON:0007284,9.57e-09,82;UBERON:0010314,3.95e-08,132;UBERON:0002346,4.89e-08,86;UBERON:0001017,8.89e-08,81;UBERON:0003076,1.37e-07,15;UBERON:0003057,1.37e-07,15;UBERON:0000073,1.61e-07,53;UBERON:0002616,1.61e-07,53;UBERON:0004151,2.35e-07,3;UBERON:0002298,2.86e-07,6;UBERON:0001016,4.20e-07,89;UBERON:0000178,4.24e-07,15;UBERON:0000179,4.24e-07,15;UBERON:0000463,4.24e-07,15;UBERON:0002784,4.51e-07,4;UBERON:0003103,7.30e-07,68;UBERON:0003978,7.61e-07,3;UBERON:0009751,7.61e-07,3;UBERON:0000946,7.61e-07,3;UBERON:0002523,7.61e-07,3;UBERON:0005983,7.61e-07,3;UBERON:0002165,7.61e-07,3;UBERON:0002062,7.61e-07,3;UBERON:0007280,7.61e-07,3 | |||
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| ||
|short_description=p2@DARC | |||
}} | }} |
Latest revision as of 22:30, 17 September 2015
Short description: | p2@DARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DARC_5end |
Coexpression cluster: | C1251_adipose_heart_left_trachea_dura_cervix_bladder |
Association with transcript: | 0bp_to_ENST00000435307_5end |
EntrezGene: | DARC |
HGNC: | 4035 |
UniProt: | Q5JY94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.54e-93 | 114 |
neural tube | 1.21e-09 | 56 |
neural rod | 1.21e-09 | 56 |
future spinal cord | 1.21e-09 | 56 |
neural keel | 1.21e-09 | 56 |
organ system subdivision | 8.59e-09 | 223 |
neural plate | 9.57e-09 | 82 |
presumptive neural plate | 9.57e-09 | 82 |
structure with developmental contribution from neural crest | 3.95e-08 | 132 |
neurectoderm | 4.89e-08 | 86 |
central nervous system | 8.89e-08 | 81 |
posterior neural tube | 1.37e-07 | 15 |
chordal neural plate | 1.37e-07 | 15 |
regional part of nervous system | 1.61e-07 | 53 |
regional part of brain | 1.61e-07 | 53 |
cardiac chamber | 2.35e-07 | 3 |
brainstem | 2.86e-07 | 6 |
nervous system | 4.20e-07 | 89 |
blood | 4.24e-07 | 15 |
haemolymphatic fluid | 4.24e-07 | 15 |
organism substance | 4.24e-07 | 15 |
regional part of diencephalon | 4.51e-07 | 4 |
compound organ | 7.30e-07 | 68 |
valve | 7.61e-07 | 3 |
cardiac mesenchyme | 7.61e-07 | 3 |
cardial valve | 7.61e-07 | 3 |
tunica intima | 7.61e-07 | 3 |
heart layer | 7.61e-07 | 3 |
endocardium | 7.61e-07 | 3 |
endocardial cushion | 7.61e-07 | 3 |
presumptive endocardium | 7.61e-07 | 3 |