FFCP PHASE1:Hg19::chr21:27107881..27107973,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:27107881..27107973,- to FFCP PHASE1:Hg19::chr21:27107881..27107973,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=522 | |EntrezGene=522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=847 | |HGNC=847 | ||
|TSSclassifier=strong | |||
|UniProt=P18859,Q6IB54,Q6NZ59 | |UniProt=P18859,Q6IB54,Q6NZ59 | ||
|association_with_transcript=0bp_to_ENST00000400087,ENST00000400090,NM_001003696,NM_001003697,NM_001003701,NM_001003703,NM_001685,uc002yls.2,uc002ylt.2,uc002ylu.2,uc002ylv.2,uc002ylw.2_5end | |||
|cluster_id=chr21:27107881..27107973,- | |||
|description=CAGE_peak_2_at_ATP5J_5end | |||
|id=chr21:27107881..27107973,- | |||
|ontology_enrichment_celltype=CL:0000222!1.75e-22!119;CL:0000548!1.02e-20!679;CL:0000004!1.02e-20!679;CL:0000255!1.02e-20!679;CL:0000012!2.20e-20!682;CL:0000220!2.65e-20!246;CL:0002321!8.46e-20!248;CL:0000144!1.41e-15!625;CL:0000213!2.36e-14!57;CL:0000215!2.36e-14!57;CL:0000055!1.33e-13!180;CL:0002371!2.41e-13!591;CL:0000066!2.10e-12!254;CL:0000115!3.05e-12!35;CL:0002078!1.73e-11!44;CL:0002139!1.05e-10!24;CL:0000183!4.85e-10!59;CL:0000003!1.53e-09!722;CL:0000071!2.73e-09!18;CL:0002546!2.73e-09!18;CL:0000680!9.98e-09!57;CL:0000056!9.98e-09!57;CL:0000355!9.98e-09!57;CL:0000187!6.72e-08!54;CL:0000076!8.56e-08!62;CL:0000192!9.14e-07!42;CL:0000514!9.14e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000115;5.97e-11;36!CL:0002139;1.17e-10;24!CL:0000071;2.64e-09;18!CL:0000213;1.42e-08;58!CL:0000215;1.42e-08;58!CL:0002078;2.89e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.51e-22,121;CL:0002321,5.81e-20,250;CL:0000213,8.42e-15,58;CL:0000215,8.42e-15,58;CL:0000115,1.05e-12,36;CL:0000066,1.46e-12,253;CL:0002078,6.25e-12,45;CL:0002139,1.05e-10,24;CL:0000071,2.73e-09,18;CL:0002546,2.73e-09,18;CL:0000680,2.04e-08,58;CL:0000056,2.04e-08,58;CL:0000355,2.04e-08,58;CL:0000076,6.12e-08,63;CL:0000187,1.33e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002546;2.64e-09;18!CL:0000222;6.76e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.92e-14!118;UBERON:0002049!5.98e-14!79;UBERON:0007798!5.98e-14!79;UBERON:0000055!4.24e-13!69;UBERON:0005256!3.76e-12!143;UBERON:0003104!2.02e-11!238;UBERON:0009142!2.02e-11!238;UBERON:0000490!2.75e-11!138;UBERON:0004872!4.10e-11!84;UBERON:0001981!1.40e-10!60;UBERON:0007500!1.40e-10!60;UBERON:0004537!1.40e-10!60;UBERON:0006965!1.40e-10!60;UBERON:0000119!2.82e-10!312;UBERON:0004535!5.05e-10!110;UBERON:0002100!8.36e-10!216;UBERON:0001009!8.71e-10!113;UBERON:0000483!1.23e-09!309;UBERON:0000486!1.33e-09!82;UBERON:0000914!2.09e-09!83;UBERON:0002329!2.09e-09!83;UBERON:0003077!2.09e-09!83;UBERON:0003059!2.09e-09!83;UBERON:0007282!2.09e-09!83;UBERON:0009618!2.09e-09!83;UBERON:0007285!2.09e-09!83;UBERON:0001986!2.73e-09!18;UBERON:0004638!2.73e-09!18;UBERON:0004852!2.73e-09!18;UBERON:0004290!1.21e-08!70;UBERON:0000487!1.51e-08!22;UBERON:0006914!1.81e-08!25;UBERON:0001637!1.21e-07!42;UBERON:0003509!1.21e-07!42;UBERON:0004572!1.21e-07!42;UBERON:0000481!3.12e-07!347;UBERON:0001134!3.26e-07!61;UBERON:0002036!3.26e-07!61;UBERON:0003082!3.26e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.64e-09;18!UBERON:0001986;2.64e-09;18!UBERON:0004852;2.64e-09;18!UBERON:0000487;1.39e-08;22!UBERON:0006914;1.49e-08;25!UBERON:0003914;6.16e-08;74!UBERON:0000055;5.72e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,9.95e-15,117;UBERON:0002049,3.15e-14,78;UBERON:0007798,3.15e-14,78;UBERON:0000055,2.15e-13,68;UBERON:0000490,1.49e-12,148;UBERON:0003104,5.05e-12,160;UBERON:0009142,5.05e-12,160;UBERON:0004872,2.48e-11,83;UBERON:0007500,7.46e-11,59;UBERON:0001981,7.46e-11,59;UBERON:0004537,7.46e-11,59;UBERON:0006965,7.46e-11,59;UBERON:0007503,1.42e-10,78;UBERON:0000119,3.11e-10,309;UBERON:0004535,3.50e-10,109;UBERON:0001009,6.13e-10,112;UBERON:0000483,1.35e-09,306;UBERON:0002100,1.76e-09,199;UBERON:0005256,1.86e-09,122;UBERON:0000486,2.43e-09,83;UBERON:0004638,2.73e-09,18;UBERON:0001986,2.73e-09,18;UBERON:0004852,2.73e-09,18;UBERON:0000487,1.51e-08,22;UBERON:0006914,1.81e-08,25;UBERON:0002329,2.24e-08,71;UBERON:0003059,2.24e-08,71;UBERON:0007282,2.24e-08,71;UBERON:0004290,2.24e-08,71;UBERON:0009618,2.24e-08,71;UBERON:0003077,6.07e-08,72;UBERON:0007285,6.07e-08,72;UBERON:0001637,1.21e-07,42;UBERON:0003509,1.21e-07,42;UBERON:0004572,1.21e-07,42;UBERON:0007524,1.32e-07,73;UBERON:0001134,5.84e-07,62;UBERON:0002036,5.84e-07,62;UBERON:0003082,5.84e-07,62 | |||
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| ||
|short_description=p2@ATP5J | |||
}} | }} |
Latest revision as of 22:29, 17 September 2015
Short description: | p2@ATP5J |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATP5J_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000400087, ENST00000400090, NM_001003696, NM_001003697, NM_001003701, NM_001003703, NM_001685, uc002yls.2, uc002ylt.2, uc002ylu.2, uc002ylv.2, uc002ylw.2_5end |
EntrezGene: | ATP5J |
HGNC: | 847 |
UniProt: | P18859Q6IB54Q6NZ59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.51e-22 | 121 |
embryonic cell | 5.81e-20 | 250 |
lining cell | 8.42e-15 | 58 |
barrier cell | 8.42e-15 | 58 |
endothelial cell | 1.05e-12 | 36 |
epithelial cell | 1.46e-12 | 253 |
meso-epithelial cell | 6.25e-12 | 45 |
endothelial cell of vascular tree | 1.05e-10 | 24 |
blood vessel endothelial cell | 2.73e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.73e-09 | 18 |
muscle precursor cell | 2.04e-08 | 58 |
myoblast | 2.04e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.04e-08 | 58 |
squamous epithelial cell | 6.12e-08 | 63 |
muscle cell | 1.33e-07 | 55 |