FFCP PHASE1:Hg19::chr13:73458552..73458595,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10464 | |EntrezGene=10464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23352 | |HGNC=23352 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000486330_5end | |association_with_transcript=0bp_to_ENST00000486330_5end | ||
|cluster_id=chr13:73458552..73458595,+ | |||
|coexpression_cluster_id=C125 | |coexpression_cluster_id=C125 | ||
|description=CAGE_peak_6_at_PIBF1_5end | |description=CAGE_peak_6_at_PIBF1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!1.50e-17!9;CL:0000764!8.43e-15!2;CL:0000765!8.43e-15!2;CL:0000050!8.43e-15!2;CL:0000038!8.43e-15!2;CL:0000558!8.43e-15!2;CL:0000547!8.43e-15!2;CL:0000549!8.43e-15!2;CL:0000550!8.43e-15!2;CL:0000552!8.43e-15!2;CL:0002097!4.18e-14!2;CL:0000174!1.06e-09!3;CL:0000594!1.21e-09!3;CL:0000319!2.70e-08!1;CL:0001024!6.52e-08!1;CL:0000163!3.57e-07!9 | |ontology_enrichment_celltype=CL:0000188!1.50e-17!9;CL:0000764!8.43e-15!2;CL:0000765!8.43e-15!2;CL:0000050!8.43e-15!2;CL:0000038!8.43e-15!2;CL:0000558!8.43e-15!2;CL:0000547!8.43e-15!2;CL:0000549!8.43e-15!2;CL:0000550!8.43e-15!2;CL:0000552!8.43e-15!2;CL:0002097!4.18e-14!2;CL:0000174!1.06e-09!3;CL:0000594!1.21e-09!3;CL:0000319!2.70e-08!1;CL:0001024!6.52e-08!1;CL:0000163!3.57e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.02e-57;2!CL:0000558;2.02e-57;2!CL:0000319;7.48e-30;1!CL:0000159;1.15e-15;2!CL:0000097;6.04e-07;5 | |ontology_enrichment_celltype_v019=CL:0000764;2.02e-57;2!CL:0000558;2.02e-57;2!CL:0000319;7.48e-30;1!CL:0000159;1.15e-15;2!CL:0000097;6.04e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.02e-57,2;CL:0000765,2.02e-57,2;CL:0000050,2.02e-57,2;CL:0000038,2.02e-57,2;CL:0000558,2.02e-57,2;CL:0000547,2.02e-57,2;CL:0000549,2.02e-57,2;CL:0000550,2.02e-57,2;CL:0000552,2.02e-57,2;CL:0000319,7.48e-30,1;CL:0000159,1.15e-15,2;CL:0000097,6.04e-07,5;CL:0002028,6.04e-07,5;CL:0000763,8.77e-07,108;CL:0000049,8.77e-07,108 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3030!2.70e-08!1;DOID:8552!4.66e-08!1 | |ontology_enrichment_disease=DOID:3030!2.70e-08!1;DOID:8552!4.66e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3030;7.48e-30;1!DOID:3493;1.78e-15;2 | |ontology_enrichment_disease_v019=DOID:3030;7.48e-30;1!DOID:3493;1.78e-15;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,7.48e-30,1;DOID:3493,1.78e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0002369!1.06e-09!3;UBERON:0001235!1.06e-09!3;UBERON:0006858!1.06e-09!3 | |ontology_enrichment_uberon=UBERON:0002369!1.06e-09!3;UBERON:0001235!1.06e-09!3;UBERON:0006858!1.06e-09!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p6@PIBF1 | |short_description=p6@PIBF1 | ||
}} | }} |
Latest revision as of 22:28, 17 September 2015
Short description: | p6@PIBF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PIBF1_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | 0bp_to_ENST00000486330_5end |
EntrezGene: | PIBF1 |
HGNC: | 23352 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.02e-57 | 2 |
erythroblast | 2.02e-57 | 2 |
megakaryocyte-erythroid progenitor cell | 2.02e-57 | 2 |
erythroid progenitor cell | 2.02e-57 | 2 |
reticulocyte | 2.02e-57 | 2 |
proerythroblast | 2.02e-57 | 2 |
basophilic erythroblast | 2.02e-57 | 2 |
polychromatophilic erythroblast | 2.02e-57 | 2 |
orthochromatic erythroblast | 2.02e-57 | 2 |
mucus secreting cell | 7.48e-30 | 1 |
seromucus secreting cell | 1.15e-15 | 2 |
mast cell | 6.04e-07 | 5 |
basophil mast progenitor cell | 6.04e-07 | 5 |
myeloid cell | 8.77e-07 | 108 |
common myeloid progenitor | 8.77e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 7.48e-30 | 1 |
signet ring cell adenocarcinoma | 1.78e-15 | 2 |