FFCP PHASE1:Hg19::chr9:79792328..79792331,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:79792328..79792331,+ to FFCP PHASE1:Hg19::chr9:79792328..79792331,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23230 | |EntrezGene=23230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1908 | |HGNC=1908 | ||
|TSSclassifier=strong | |||
|UniProt=Q96RL7 | |UniProt=Q96RL7 | ||
|association_with_transcript=-29bp_to_ENST00000360280,ENST00000376636,NM_001018037,NM_001018038,NM_015186,NM_033305,uc004akp.3,uc004akq.3,uc004akr.2,uc004aks.2_5end | |||
|cluster_id=chr9:79792328..79792331,+ | |||
|description=CAGE_peak_5_at_VPS13A_5end | |||
|id=chr9:79792328..79792331,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;5.14e-50;2!CL:0000558;5.14e-50;2!CL:0002581;5.92e-26;1!CL:0000123;6.43e-14;2!CL:0000242;6.43e-14;2!CL:0002615;1.41e-09;3!CL:0002623;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.46e-50,2;CL:0000765,1.46e-50,2;CL:0000050,1.46e-50,2;CL:0000038,1.46e-50,2;CL:0000558,1.46e-50,2;CL:0000547,1.46e-50,2;CL:0000549,1.46e-50,2;CL:0000550,1.46e-50,2;CL:0000552,1.46e-50,2;CL:0002581,4.61e-26,1;CL:0000242,6.43e-14,2;CL:0002623,1.41e-09,3;CL:0002615,1.81e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.07e-13;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,9.40e-14,2 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0.0774672005803016,0,0.587200878669695,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.245668634623536,0.309977343527296,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0.621984346622316,0.432359860250884,0.75745460055828,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,1.48418066444991,0.154209693802656,0,0,0.519254429183621,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,1.75407901316748,1.5686127061494,0,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.106824071127473,0,0.490080431962063,0.185803175125719,0,0.426851060090485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0.16480387422676,0,0,0,0.251932747854276,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0.262379999988587,0,0,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0,0,0.41827123283581,0,0.113942055847001,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0,0,0,0.37950746544837,0.317873157960757,0.210998064528027,0,0.141353071433941,0,0,0.353830258013357,0,0.296521128680622,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.300646838828985,0.311064574191741,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.261177619741208,0,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0.264768380074501,0,0.137041924646751,0.19871461170299,0.126621591911757,0.195551382734803,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0.429226048136571,0,0.268733889946905,0,0,0.157566364614447,0,0.0674035438541849,0.0984274815147488,0.254019996197353,0,0.136203406111576,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0,0,0,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0.704815022316672,0.427149650270779,0.157204305099666,0,0,0,0.121792598380896,0,0,0.5013797880454,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0.415045904808692,0,0,0,0,2.81000943484129,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0.168942440653073,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0.107824811396682,0,0.218419276384028,0,0.212574920101683,0,0.558644917973244,0.636008701306837,0.394308725006267,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.588886311006154,0,0,0,0,0.690359926060101,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.175871244359621,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0.354581522651905,0,0,0,0.280272163313789,0.913158720509496,0,0,0.0714765441766563,0.47404083519818,0.23248285073625,0,0,0,0.85359238546975,1.38251932362818,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0.701818390386317,0.397901550322736,0,0,0.219881033490858,0,0.308696632431779,0.437119121007915,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.253397002022874,0,0.26721740526556,0.0918948995348449,0.2507075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| |phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0.0774672005803016,0,0.587200878669695,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.245668634623536,0.309977343527296,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0.621984346622316,0.432359860250884,0.75745460055828,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,1.48418066444991,0.154209693802656,0,0,0.519254429183621,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,1.75407901316748,1.5686127061494,0,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.106824071127473,0,0.490080431962063,0.185803175125719,0,0.426851060090485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0.16480387422676,0,0,0,0.251932747854276,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0.262379999988587,0,0,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0,0,0.41827123283581,0,0.113942055847001,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0,0,0,0.37950746544837,0.317873157960757,0.210998064528027,0,0.141353071433941,0,0,0.353830258013357,0,0.296521128680622,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.300646838828985,0.311064574191741,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.261177619741208,0,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0.264768380074501,0,0.137041924646751,0.19871461170299,0.126621591911757,0.195551382734803,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0.429226048136571,0,0.268733889946905,0,0,0.157566364614447,0,0.0674035438541849,0.0984274815147488,0.254019996197353,0,0.136203406111576,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0,0,0,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0.704815022316672,0.427149650270779,0.157204305099666,0,0,0,0.121792598380896,0,0,0.5013797880454,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0.415045904808692,0,0,0,0,2.81000943484129,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0.168942440653073,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0.107824811396682,0,0.218419276384028,0,0.212574920101683,0,0.558644917973244,0.636008701306837,0.394308725006267,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.588886311006154,0,0,0,0,0.690359926060101,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.175871244359621,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0.354581522651905,0,0,0,0.280272163313789,0.913158720509496,0,0,0.0714765441766563,0.47404083519818,0.23248285073625,0,0,0,0.85359238546975,1.38251932362818,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0.701818390386317,0.397901550322736,0,0,0.219881033490858,0,0.308696632431779,0.437119121007915,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.253397002022874,0,0.26721740526556,0.0918948995348449,0.250707539292375,1.13668047327359,0.803892390468535,0,0,0,0,0.258355639344024,0.186224142887574,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0.213454691755431,0,0,0,0.122241444182866,0,0,0,0.320568492303233 | ||
|short_description=p5@VPS13A | |||
}} | }} |
Latest revision as of 22:12, 17 September 2015
Short description: | p5@VPS13A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VPS13A_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000360280, ENST00000376636, NM_001018037, NM_001018038, NM_015186, NM_033305, uc004akp.3, uc004akq.3, uc004akr.2, uc004aks.2_5end |
EntrezGene: | VPS13A |
HGNC: | 1908 |
UniProt: | Q96RL7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.46e-50 | 2 |
erythroblast | 1.46e-50 | 2 |
megakaryocyte-erythroid progenitor cell | 1.46e-50 | 2 |
erythroid progenitor cell | 1.46e-50 | 2 |
reticulocyte | 1.46e-50 | 2 |
proerythroblast | 1.46e-50 | 2 |
basophilic erythroblast | 1.46e-50 | 2 |
polychromatophilic erythroblast | 1.46e-50 | 2 |
orthochromatic erythroblast | 1.46e-50 | 2 |
perirenal preadipocyte | 4.61e-26 | 1 |
Merkel cell | 6.43e-14 | 2 |
acinar cell of salivary gland | 1.41e-09 | 3 |
adipocyte of omentum tissue | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 9.40e-14 | 2 |