FFCP PHASE1:Hg19::chr2:163695238..163695258,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:163695238..163695258,- to FFCP PHASE1:Hg19::chr2:163695238..163695258,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90134 | |EntrezGene=90134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18863 | |HGNC=18863 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS40 | |UniProt=Q9NS40 | ||
|association_with_transcript=0bp_to_ENST00000328032,NM_033272,NM_173162,uc002uch.1,uc002uci.2_5end | |||
|cluster_id=chr2:163695238..163695258,- | |||
|coexpression_cluster_id=C2567 | |||
|description=CAGE_peak_2_at_KCNH7_5end | |||
|id=chr2:163695238..163695258,- | |||
|ontology_enrichment_celltype=CL:0000047!1.46e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.41e-10;2!CL:0000242;2.41e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.42e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.77e-13;3!UBERON:0006601;3.76e-10;82 | |||
|ontology_enrichment_disease=DOID:171!4.92e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.00e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.04e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.84e-63!57;UBERON:0005068!5.84e-63!57;UBERON:0006241!5.84e-63!57;UBERON:0007135!5.84e-63!57;UBERON:0001017!3.33e-62!82;UBERON:0005743!5.66e-61!86;UBERON:0000073!7.59e-61!94;UBERON:0001016!7.59e-61!94;UBERON:0002616!7.83e-55!59;UBERON:0002780!8.24e-54!41;UBERON:0001890!8.24e-54!41;UBERON:0006240!8.24e-54!41;UBERON:0002346!3.50e-53!90;UBERON:0003080!2.69e-52!42;UBERON:0003075!8.72e-52!86;UBERON:0007284!8.72e-52!86;UBERON:0000955!3.15e-49!69;UBERON:0006238!3.15e-49!69;UBERON:0001869!2.53e-48!32;UBERON:0001893!4.91e-48!34;UBERON:0002020!5.08e-48!34;UBERON:0003528!5.08e-48!34;UBERON:0002791!4.93e-46!33;UBERON:0000956!1.95e-39!25;UBERON:0000203!1.95e-39!25;UBERON:0003056!3.82e-39!61;UBERON:0001950!1.13e-38!20;UBERON:0002619!2.44e-38!22;UBERON:0000924!1.64e-36!173;UBERON:0006601!1.64e-36!173;UBERON:0004121!5.49e-35!169;UBERON:0007023!6.83e-29!115;UBERON:0000033!2.67e-27!123;UBERON:0000153!1.21e-26!129;UBERON:0007811!1.21e-26!129;UBERON:0000025!5.86e-16!194;UBERON:0001871!4.36e-13!7;UBERON:0000200!4.52e-13!6;UBERON:0003076!6.96e-12!15;UBERON:0003057!6.96e-12!15;UBERON:0001872!9.58e-12!5;UBERON:0002021!1.95e-11!5;UBERON:0002420!1.81e-10!9;UBERON:0007245!1.81e-10!9;UBERON:0010009!1.81e-10!9;UBERON:0010011!1.81e-10!9;UBERON:0000454!1.81e-10!9;UBERON:0000064!2.60e-10!219;UBERON:0004111!3.20e-10!241;UBERON:0002308!3.57e-10!9;UBERON:0000125!3.57e-10!9;UBERON:0004733!4.77e-10!12;UBERON:0002028!4.77e-10!12;UBERON:0007277!4.77e-10!12;UBERON:0000483!8.68e-10!309;UBERON:0000119!1.49e-09!312;UBERON:0004732!3.73e-09!13;UBERON:0003296!4.18e-09!4;UBERON:0010133!4.18e-09!4;UBERON:0000369!1.27e-08!4;UBERON:0002435!1.27e-08!4;UBERON:0000204!1.27e-08!4;UBERON:0010082!1.27e-08!4;UBERON:0000477!3.82e-08!286;UBERON:0002680!4.53e-08!9;UBERON:0001895!4.53e-08!9;UBERON:0010092!4.53e-08!9;UBERON:0002771!1.94e-07!3;UBERON:0001894!2.48e-07!7;UBERON:0006222!2.48e-07!7;UBERON:0000349!3.57e-07!5;UBERON:0009663!4.26e-07!7;UBERON:0000988!8.56e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.77e-62;20!UBERON:0002619;3.36e-56;22!UBERON:0000956;3.24e-49;25!UBERON:0000203;3.24e-49;25!UBERON:0001869;9.81e-42;32!UBERON:0001893;2.64e-39;34!UBERON:0002791;4.85e-37;32!UBERON:0002780;1.45e-36;41!UBERON:0001890;1.45e-36;41!UBERON:0003528;2.42e-34;34!UBERON:0002020;2.42e-34;34!UBERON:0000073;9.48e-34;53!UBERON:0002616;9.48e-34;53!UBERON:0001872;9.68e-22;5!UBERON:0002021;2.06e-21;5!UBERON:0000955;2.18e-20;68!UBERON:0001017;5.31e-19;75!UBERON:0001016;3.86e-18;83!UBERON:0000200;2.59e-17;6!UBERON:0003296;5.45e-17;4!UBERON:0010133;5.45e-17;4!UBERON:0001871;7.42e-15;6!UBERON:0001894;9.16e-10;7!UBERON:0000007;1.45e-09;2!UBERON:0002771;3.81e-09;2!UBERON:0001905;3.81e-09;2!UBERON:0002757;3.81e-09;2!UBERON:0010134;3.81e-09;2!UBERON:0005408;3.81e-09;2!UBERON:0001899;3.81e-09;2!UBERON:0007023;1.38e-08;114!UBERON:0004733;1.72e-08;12!UBERON:0002028;1.72e-08;12!UBERON:0004732;8.13e-08;13!UBERON:0002680;1.30e-07;9!UBERON:0001895;1.30e-07;9!UBERON:0011216;1.54e-07;132!UBERON:0002037;7.26e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.17e-62,20;UBERON:0000073,2.34e-59,53;UBERON:0002616,2.34e-59,53;UBERON:0002619,1.95e-56,22;UBERON:0001049,7.12e-56,56;UBERON:0005068,7.12e-56,56;UBERON:0006241,7.12e-56,56;UBERON:0007135,7.12e-56,56;UBERON:0002780,9.29e-53,41;UBERON:0001890,9.29e-53,41;UBERON:0003080,9.29e-53,41;UBERON:0006240,9.29e-53,41;UBERON:0000956,2.01e-49,25;UBERON:0000203,2.01e-49,25;UBERON:0000955,1.29e-47,68;UBERON:0006238,1.29e-47,68;UBERON:0001869,2.07e-47,32;UBERON:0001017,4.66e-45,81;UBERON:0001893,2.01e-44,34;UBERON:0001016,7.17e-43,89;UBERON:0002791,1.53e-42,32;UBERON:0003528,7.54e-40,34;UBERON:0002020,7.54e-40,34;UBERON:0003075,3.11e-36,82;UBERON:0007284,3.11e-36,82;UBERON:0002346,2.96e-34,86;UBERON:0003056,7.21e-34,61;UBERON:0010371,5.98e-32,104;UBERON:0004121,2.56e-22,171;UBERON:0000924,2.56e-22,171;UBERON:0006601,2.56e-22,171;UBERON:0007023,2.86e-22,114;UBERON:0001872,7.32e-22,5;UBERON:0010314,9.93e-22,132;UBERON:0002021,3.04e-21,5;UBERON:0011216,9.75e-18,223;UBERON:0000200,1.68e-17,6;UBERON:0003296,1.35e-16,4;UBERON:0010133,1.35e-16,4;UBERON:0001871,4.47e-15,6;UBERON:0000025,4.12e-14,192;UBERON:0004111,6.40e-10,240;UBERON:0001894,1.52e-09,7;UBERON:0006222,1.52e-09,7;UBERON:0000007,1.85e-09,2;UBERON:0002771,2.60e-09,2;UBERON:0001905,7.45e-09,2;UBERON:0002757,7.45e-09,2;UBERON:0010134,7.45e-09,2;UBERON:0005408,7.45e-09,2;UBERON:0001899,7.45e-09,2;UBERON:0004733,1.73e-08,12;UBERON:0002028,1.73e-08,12;UBERON:0007277,1.73e-08,12;UBERON:0004732,8.14e-08,13;UBERON:0000483,8.48e-08,306;UBERON:0000119,1.18e-07,309;UBERON:0002680,1.46e-07,9;UBERON:0001895,1.46e-07,9;UBERON:0010092,1.46e-07,9;UBERON:0002037,7.89e-07,6;UBERON:0006215,7.89e-07,6;UBERON:0001870,9.55e-07,3;UBERON:0003076,9.75e-07,15;UBERON:0003057,9.75e-07,15 | |||
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| ||
|short_description=p2@KCNH7 | |||
}} | }} |
Latest revision as of 22:09, 17 September 2015
Short description: | p2@KCNH7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNH7_5end |
Coexpression cluster: | C2567_merkel_neuroblastoma_parietal_occipital_duodenum_temporal_brain |
Association with transcript: | 0bp_to_ENST00000328032, NM_033272, NM_173162, uc002uch.1, uc002uci.2_5end |
EntrezGene: | KCNH7 |
HGNC: | 18863 |
UniProt: | Q9NS40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.42e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.04e-07 | 14 |