FFCP PHASE1:Hg19::chr12:25055949..25056088,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=586 | |EntrezGene=586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=976 | |HGNC=976 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5E4,B7Z2M5,P54687 | |UniProt=F5H5E4,B7Z2M5,P54687 | ||
|association_with_transcript=0bp_to_ENST00000539282,NM_001178093,uc010six.1_5end | |association_with_transcript=0bp_to_ENST00000539282,NM_001178093,uc010six.1_5end | ||
|cluster_id=chr12:25055949..25056088,- | |||
|coexpression_cluster_id=C128 | |coexpression_cluster_id=C128 | ||
|description=CAGE_peak_2_at_BCAT1_5end | |description=CAGE_peak_2_at_BCAT1_5end | ||
|id=chr12:25055949..25056088,- | |id=chr12:25055949..25056088,- | ||
|ontology_enrichment_celltype=CL:0000473;5.96e-20;39!CL:0000234;5.96e-20;39!CL:0000860;6.21e-20;33!CL:0002057;6.21e-20;33!CL:0000576;6.55e-16;48!CL:0002139;6.80e-13;24!CL:0000115;7.37e-12;36!CL:0000766;9.08e-12;69!CL:0000071;5.71e-10;18!CL:0002078;9.24e-07;45 | |ontology_enrichment_celltype=CL:0002057!4.13e-24!42;CL:0002194!2.00e-22!63;CL:0000576!2.00e-22!63;CL:0000040!2.00e-22!63;CL:0000559!2.00e-22!63;CL:0000766!6.42e-22!76;CL:0002009!2.38e-21!65;CL:0000860!2.40e-20!45;CL:0000557!3.63e-19!71;CL:0000839!1.69e-18!70;CL:0000115!5.85e-13!35;CL:0002139!3.37e-12!24;CL:0000071!1.73e-09!18;CL:0002546!1.73e-09!18;CL:0000763!8.67e-09!112;CL:0000049!8.67e-09!112;CL:0002078!1.05e-08!44 | ||
| | |ontology_enrichment_celltype_v019=CL:0000473;5.96e-20;39!CL:0000234;5.96e-20;39!CL:0000860;6.21e-20;33!CL:0002057;6.21e-20;33!CL:0000576;6.55e-16;48!CL:0002139;6.80e-13;24!CL:0000115;7.37e-12;36!CL:0000766;9.08e-12;69!CL:0000071;5.71e-10;18!CL:0002078;9.24e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.86e-29,48;CL:0000234,1.86e-29,48;CL:0002194,9.79e-28,59;CL:0000576,9.79e-28,59;CL:0000040,9.79e-28,59;CL:0000559,9.79e-28,59;CL:0002009,1.59e-26,61;CL:0000766,1.58e-25,72;CL:0000860,1.64e-25,42;CL:0002057,1.64e-25,42;CL:0000557,5.24e-23,67;CL:0000839,2.14e-22,66;CL:0000115,9.71e-14,36;CL:0002139,7.41e-13,24;CL:0000763,4.23e-11,108;CL:0000049,4.23e-11,108;CL:0000071,5.60e-10,18;CL:0002546,5.60e-10,18;CL:0002078,4.03e-09,45;CL:0002087,3.67e-07,115;CL:0000738,7.42e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;7.82e-19;42!CL:0002546;5.71e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004638;5.71e-10;18!UBERON:0001986;5.71e-10;18!UBERON:0004852;5.71e-10;18!UBERON:0001869;2.07e-09;32!UBERON:0003528;2.23e-09;34!UBERON:0002020;2.23e-09;34!UBERON:0001893;3.08e-09;34!UBERON:0002791;4.64e-09;32!UBERON:0002780;1.24e-08;41!UBERON:0001890;1.24e-08;41!UBERON:0000956;9.81e-08;25!UBERON:0000203;9.81e-08;25!UBERON:0002619;1.43e-07;22!UBERON:0000073;1.50e-07;53!UBERON:0002616;1.50e-07;53!UBERON:0001950;1.52e-07;20 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.10e-20!659;UBERON:0000467!1.34e-19!625;UBERON:0000480!2.79e-19!626;UBERON:0002371!6.93e-18!80;UBERON:0004765!2.14e-17!101;UBERON:0001434!2.14e-17!101;UBERON:0002193!3.78e-16!112;UBERON:0002405!2.01e-15!115;UBERON:0001474!5.47e-15!86;UBERON:0000922!1.91e-14!612;UBERON:0003081!2.59e-14!216;UBERON:0002390!7.44e-14!102;UBERON:0003061!7.44e-14!102;UBERON:0000073!2.18e-13!94;UBERON:0001016!2.18e-13!94;UBERON:0001049!4.87e-13!57;UBERON:0005068!4.87e-13!57;UBERON:0006241!4.87e-13!57;UBERON:0007135!4.87e-13!57;UBERON:0002050!9.17e-13!605;UBERON:0005423!9.17e-13!605;UBERON:0005743!9.29e-13!86;UBERON:0002204!1.01e-12!167;UBERON:0000923!1.94e-12!604;UBERON:0005291!1.94e-12!604;UBERON:0006598!1.94e-12!604;UBERON:0002532!1.94e-12!604;UBERON:0007023!5.40e-12!115;UBERON:0001017!5.58e-12!82;UBERON:0003080!1.09e-11!42;UBERON:0002616!1.22e-11!59;UBERON:0002780!2.39e-11!41;UBERON:0001890!2.39e-11!41;UBERON:0006240!2.39e-11!41;UBERON:0002020!1.96e-10!34;UBERON:0003528!1.96e-10!34;UBERON:0001893!3.80e-10!34;UBERON:0000479!4.79e-10!787;UBERON:0001869!5.04e-10!32;UBERON:0004121!6.93e-10!169;UBERON:0002791!1.06e-09!33;UBERON:0003075!1.42e-09!86;UBERON:0007284!1.42e-09!86;UBERON:0001986!1.73e-09!18;UBERON:0004638!1.73e-09!18;UBERON:0004852!1.73e-09!18;UBERON:0000955!2.05e-09!69;UBERON:0006238!2.05e-09!69;UBERON:0000924!4.30e-09!173;UBERON:0006601!4.30e-09!173;UBERON:0000062!4.53e-09!511;UBERON:0000033!1.05e-08!123;UBERON:0003056!1.40e-08!61;UBERON:0002346!1.94e-08!90;UBERON:0000153!6.10e-08!129;UBERON:0007811!6.10e-08!129;UBERON:0000956!1.37e-07!25;UBERON:0000203!1.37e-07!25;UBERON:0002619!2.19e-07!22;UBERON:0001950!2.75e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.71e-10;18!UBERON:0001986;5.71e-10;18!UBERON:0004852;5.71e-10;18!UBERON:0001869;2.07e-09;32!UBERON:0003528;2.23e-09;34!UBERON:0002020;2.23e-09;34!UBERON:0001893;3.08e-09;34!UBERON:0002791;4.64e-09;32!UBERON:0002780;1.24e-08;41!UBERON:0001890;1.24e-08;41!UBERON:0000956;9.81e-08;25!UBERON:0000203;9.81e-08;25!UBERON:0002619;1.43e-07;22!UBERON:0000073;1.50e-07;53!UBERON:0002616;1.50e-07;53!UBERON:0001950;1.52e-07;20 | |||
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|phase1_expression=0.908391896352783,1.92690471501885,1.69145284915165,5.00366491765652,3.12872766099101,1.74467704820074,0,4.42203911398782,1.30592814099919,0.491467873003018,0.697801167972428,5.67947567538448,4.22027165165526,6.31208400096238,2.65117900582333,0.672325146451775,0,0,0.487932798790507,1.35433163884467,1.42800483870977,0.940364164434263,3.72106783270374,2.87436292653057,6.40267461933494,3.132949635666,3.11982239909794,3.54198515911557,5.90046415273356,8.44424675813868,7.43117391917165,0,1.204823675113,1.10926203050036,0,0,0.880801318004542,8.30993112797816,14.8402891127905,11.2845652772243,26.8698569087909,43.4017512465433,31.6817948190049,49.2900029462724,77.0866925125171,66.9532008878373,52.296533303779,99.9137967893037,91.0536730431605,24.4538533473828,42.7788379903598,36.4182634028421,34.1298223929252,68.4213764598856,47.3992703080196,54.9667631464406,92.7880910196676,85.3949240891322,46.5247516403772,80.2322567690234,69.6877467120955,16.4925650093358,32.512576192326,39.6389017995406,26.4090407152011,55.6037520197317,38.6149794377257,28.391099174012,43.2830822288767,44.3065243198438,12.7133895553007,43.0884834105451,39.5577984301106,17.1116781912673,4.67729459923096,15.3050811221114,10.1095768031846,4.35512989240368,4.66104201421532,47.027102717306,10.5425838915518,28.1302796797536,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,0,2.24203425192614,1.31692042387539,0,0.393010762749165,1.02800749499755,0,0,0,0,0.111410456885174,0,0.664601683750863,0,0.128091319725675,0.130059347559878,0.164437904603676,0.552700035571697,0.289803085735052,0,0,0,0.566546713487831,0.383220493601921,0.34362744548263,0,0.318565414324097,0,0,0.903450714466637,0,0,0.473554504088034,0,0,0.534880391567015,0.144824403882799,2.43806866313962,0.670700859703636,1.79007586580942,3.61439152384566,2.50668955317945,3.62116297402059,4.7717156823066,17.5188553308949,1.13441780596881,0.443458794925128,1.14185221401064,4.58426764241994,0,2.22470665670658,3.24547393654683,3.48259474598534,9.30705723632056,0.715471872916026,0.571994910780128,0,19.0811911072037,8.60234595106124,10.4142150482278,13.5673906061762,7.97048928798821,14.0310201389434,11.2857281929878,12.4040044401278,10.3172216179146,8.03329470635209,35.4489799056049,15.9657142200888,45.8836668190559,19.8538063386769,5.67099363517232,38.4881828904384,38.1699933464489,31.9816604572635,21.4643292452237,8.54339093611316,22.7170162473705,6.58902087180316,34.9002237733493,0.872188104285069,1.49091585508596,2.78587125662075,0.662045904066094,1.72101972449288,7.4480360261655,1.68203280042692,0,1.2333377420858,1.8672662123986,2.96363478553314,3.10577615915572,0.605429710579726,2.30470369792,0.70296429550139,18.7296046098192,6.84566185853339,8.07022874979726,16.2059608128396,18.6153886023351,17.6968016444833,17.3531045566659,9.82674538494144,9.60929764934619,10.6920257155385,9.1488763833066,1.82032272387605,1.43723628363248,11.7835279767846,10.8853112288609,10.8055005038831,14.0472838681868,14.4049264025539,7.96261712204963,2.83580457900053,7.35497506324334,6.40672166455702,4.02670612203168,7.50227740211006,6.59536187126009,3.60696756063881,2.41951913231067,4.55696097051419,1.94874010322397,9.59248342127635,3.77404584433427,9.5371173523099,4.61512470271599,4.53384442024381,6.95198428472999,5.7978255948989,5.72766853240753,0.860413786167011,11.0996072577932,14.0481554420774,12.8975276585165,8.91485073132186,8.32658807889574,12.4092302085782,0,0,4.14404764057442,9.28735856063958,15.1594691150613,0,0,0,0,0,0,0,0,0,8.11971000087113,1.40241773803446,0.8231480226628,2.94017422771084,0,1.96565443335525,2.95394953340702,0,0,1.3725424823882,1.42675371031213,0,0.603173834469785,10.4624943029138,0.651616610620649,3.11980435583874,1.44331342025273,6.14431146367907,0.352226082707465,28.2958237611705,33.334956905516,40.3338802737348,0,0,45.0577121139937,48.9068914141007,65.2490802447517,3.74935335947108,1.34385702559088,3.68615252830205,3.40322386270824,2.61570544662566,2.30029607499127,1.47798971368783,0.44024217006613,1.4512968087854,0.432359860250884,0.25248486685276,0.63497894292169,0.763976851116555,0,0,0.411309970813294,0,0,2.13049060256185,0.87192013766656,4.91366515000365,0,3.57656445851882,9.298330278116,0.531876233169741,2.08014873822732,1.80045161983499,4.25547396069835,1.8649552531127,3.28849385413739,0,0,6.5147236858747,2.13235169245527,0,2.1100756394171,1.74306691720059,1.3996218765488,21.8922805154143,29.1309113030633,21.0833939483032,1.91699884393266,2.29723871668228,2.85273810081437,3.76431397335706,2.26023954805422,5.01370697071708,0,0.394061520403854,0,0.385029108839245,4.8277978602268,6.50699269288109,3.09315525111078,6.36561808270525,1.27587750330633,9.73709131131337,5.9832291840805,0.828831026872071,8.09763845346323,6.5022167737758,2.17012018959788,3.11956292296211,2.67643483195743,2.20783381047509,0.819989904948992,5.71797589482666,0,2.0694614258501,1.99267679560631,2.94990669666725,0.868836144680828,2.54541504701563,1.37257369524342,4.54889657470352,4.74571241800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| ||
|short_description=p2@BCAT1 | |short_description=p2@BCAT1 | ||
}} | }} |
Latest revision as of 22:01, 17 September 2015
Short description: | p2@BCAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BCAT1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 0bp_to_ENST00000539282, NM_001178093, uc010six.1_5end |
EntrezGene: | BCAT1 |
HGNC: | 976 |
UniProt: | F5H5E4B7Z2M5P54687 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.86e-29 | 48 |
phagocyte | 1.86e-29 | 48 |
monopoietic cell | 9.79e-28 | 59 |
monocyte | 9.79e-28 | 59 |
monoblast | 9.79e-28 | 59 |
promonocyte | 9.79e-28 | 59 |
macrophage dendritic cell progenitor | 1.59e-26 | 61 |
myeloid leukocyte | 1.58e-25 | 72 |
classical monocyte | 1.64e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-25 | 42 |
granulocyte monocyte progenitor cell | 5.24e-23 | 67 |
myeloid lineage restricted progenitor cell | 2.14e-22 | 66 |
endothelial cell | 9.71e-14 | 36 |
endothelial cell of vascular tree | 7.41e-13 | 24 |
myeloid cell | 4.23e-11 | 108 |
common myeloid progenitor | 4.23e-11 | 108 |
blood vessel endothelial cell | 5.60e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.60e-10 | 18 |
meso-epithelial cell | 4.03e-09 | 45 |
nongranular leukocyte | 3.67e-07 | 115 |
leukocyte | 7.42e-07 | 136 |