FFCP PHASE1:Hg19::chr15:48937465..48937476,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2200 | |EntrezGene=2200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3603 | |HGNC=3603 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-436bp_to_ENST00000558230_5end | |association_with_transcript=-436bp_to_ENST00000558230_5end | ||
|cluster_id=chr15:48937465..48937476,- | |||
|description=CAGE_peak_25_at_FBN1_5end | |description=CAGE_peak_25_at_FBN1_5end | ||
|id=chr15:48937465..48937476,- | |id=chr15:48937465..48937476,- | ||
|ontology_enrichment_celltype=CL:0000138;1.22e-15;6!CL:0000153;9.23e-11;9!CL:0000447;9.23e-11;9!CL:0000327;8.09e-07;15 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000138;1.22e-15;6!CL:0000153;9.23e-11;9!CL:0000447;9.23e-11;9!CL:0000327;8.09e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.89e-15,6;CL:0000138,1.89e-15,6;CL:0000153,1.24e-10,9;CL:0000447,1.24e-10,9;CL:0000327,9.64e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.06e-23;1!UBERON:0003056;8.31e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000941;1.06e-23;1!UBERON:0001785;1.06e-23;1!UBERON:0002464;1.06e-23;1!UBERON:0004904;1.06e-23;1!UBERON:0001021;1.06e-23;1!UBERON:0004732;5.42e-16;13!UBERON:0002298;1.22e-15;6!UBERON:0003714;1.48e-12;2!UBERON:0005162;1.48e-12;2!UBERON:0000122;1.48e-12;2!UBERON:0001897;2.45e-12;2!UBERON:0002148;2.45e-12;2!UBERON:0006331;2.45e-12;2!UBERON:0009662;2.45e-12;2!UBERON:0010225;2.45e-12;2!UBERON:0000988;1.17e-08;3!UBERON:0001896;1.17e-08;3!UBERON:0005290;1.17e-08;3!UBERON:0004733;2.65e-08;12!UBERON:0002028;2.65e-08;12!UBERON:0002784;8.37e-07;4 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.99e-21!57;UBERON:0005068!2.99e-21!57;UBERON:0006241!2.99e-21!57;UBERON:0007135!2.99e-21!57;UBERON:0007023!7.76e-20!115;UBERON:0002616!8.94e-20!59;UBERON:0002780!2.15e-18!41;UBERON:0001890!2.15e-18!41;UBERON:0006240!2.15e-18!41;UBERON:0003075!6.24e-18!86;UBERON:0007284!6.24e-18!86;UBERON:0003080!8.80e-18!42;UBERON:0002346!1.27e-16!90;UBERON:0005743!2.25e-16!86;UBERON:0000955!3.26e-16!69;UBERON:0006238!3.26e-16!69;UBERON:0002020!1.45e-15!34;UBERON:0003528!1.45e-15!34;UBERON:0001893!1.65e-15!34;UBERON:0001017!1.88e-15!82;UBERON:0000073!5.82e-15!94;UBERON:0001016!5.82e-15!94;UBERON:0002791!2.62e-14!33;UBERON:0003056!3.04e-14!61;UBERON:0001869!4.28e-13!32;UBERON:0002308!4.56e-12!9;UBERON:0000125!4.56e-12!9;UBERON:0000033!6.59e-12!123;UBERON:0004121!7.38e-12!169;UBERON:0000924!2.86e-11!173;UBERON:0006601!2.86e-11!173;UBERON:0000153!7.88e-11!129;UBERON:0007811!7.88e-11!129;UBERON:0000475!1.38e-10!365;UBERON:0000025!3.64e-09!194;UBERON:0002420!5.76e-09!9;UBERON:0007245!5.76e-09!9;UBERON:0010009!5.76e-09!9;UBERON:0010011!5.76e-09!9;UBERON:0000454!5.76e-09!9;UBERON:0009663!7.32e-09!7;UBERON:0002619!8.66e-09!22;UBERON:0000477!1.06e-08!286;UBERON:0004111!1.41e-08!241;UBERON:0001950!1.68e-08!20;UBERON:0000483!4.34e-08!309;UBERON:0000119!7.52e-08!312;UBERON:0002298!8.70e-08!8;UBERON:0000956!2.09e-07!25;UBERON:0000203!2.09e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.06e-23;1!UBERON:0001785;1.06e-23;1!UBERON:0002464;1.06e-23;1!UBERON:0004904;1.06e-23;1!UBERON:0001021;1.06e-23;1!UBERON:0004732;5.42e-16;13!UBERON:0002298;1.22e-15;6!UBERON:0003714;1.48e-12;2!UBERON:0005162;1.48e-12;2!UBERON:0000122;1.48e-12;2!UBERON:0001897;2.45e-12;2!UBERON:0002148;2.45e-12;2!UBERON:0006331;2.45e-12;2!UBERON:0009662;2.45e-12;2!UBERON:0010225;2.45e-12;2!UBERON:0000988;1.17e-08;3!UBERON:0001896;1.17e-08;3!UBERON:0005290;1.17e-08;3!UBERON:0004733;2.65e-08;12!UBERON:0002028;2.65e-08;12!UBERON:0002784;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.07e-23,1;UBERON:0001785,1.07e-23,1;UBERON:0002464,1.07e-23,1;UBERON:0004904,1.07e-23,1;UBERON:0001021,1.07e-23,1;UBERON:0003902,1.07e-23,1;UBERON:0005425,1.07e-23,1;UBERON:0004732,4.90e-16,13;UBERON:0002298,1.05e-15,6;UBERON:0003714,1.48e-12,2;UBERON:0005162,1.48e-12,2;UBERON:0000122,1.48e-12,2;UBERON:0001897,1.85e-12,2;UBERON:0010225,1.85e-12,2;UBERON:0002148,2.32e-12,2;UBERON:0006331,2.32e-12,2;UBERON:0009662,2.32e-12,2;UBERON:0001896,1.04e-08,3;UBERON:0005290,1.04e-08,3;UBERON:0010096,1.04e-08,3;UBERON:0000988,1.12e-08,3;UBERON:0004733,2.46e-08,12;UBERON:0002028,2.46e-08,12;UBERON:0007277,2.46e-08,12;UBERON:0001781,6.50e-07,4;UBERON:0002784,7.27e-07,4;UBERON:0003076,7.63e-07,15;UBERON:0003057,7.63e-07,15 | |||
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|short_description=p25@FBN1 | |short_description=p25@FBN1 | ||
}} | }} |
Latest revision as of 22:00, 17 September 2015
Short description: | p25@FBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_FBN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -436bp_to_ENST00000558230_5end |
EntrezGene: | FBN1 |
HGNC: | 3603 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.89e-15 | 6 |
chondrocyte | 1.89e-15 | 6 |
GAG secreting cell | 1.24e-10 | 9 |
carbohydrate secreting cell | 1.24e-10 | 9 |
extracellular matrix secreting cell | 9.64e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.07e-23 | 1 |
cranial nerve | 1.07e-23 | 1 |
nerve trunk | 1.07e-23 | 1 |
nerve connecting eye with brain | 1.07e-23 | 1 |
nerve | 1.07e-23 | 1 |
retinal neural layer | 1.07e-23 | 1 |
presumptive neural retina | 1.07e-23 | 1 |
segmental subdivision of nervous system | 4.90e-16 | 13 |
brainstem | 1.05e-15 | 6 |
neural tissue | 1.48e-12 | 2 |
multi cell component structure | 1.48e-12 | 2 |
neuron projection bundle | 1.48e-12 | 2 |
dorsal plus ventral thalamus | 1.85e-12 | 2 |
thalamic complex | 1.85e-12 | 2 |
locus ceruleus | 2.32e-12 | 2 |
brainstem nucleus | 2.32e-12 | 2 |
hindbrain nucleus | 2.32e-12 | 2 |
medulla oblongata | 1.04e-08 | 3 |
myelencephalon | 1.04e-08 | 3 |
future myelencephalon | 1.04e-08 | 3 |
pons | 1.12e-08 | 3 |
segmental subdivision of hindbrain | 2.46e-08 | 12 |
hindbrain | 2.46e-08 | 12 |
presumptive hindbrain | 2.46e-08 | 12 |
layer of retina | 6.50e-07 | 4 |
regional part of diencephalon | 7.27e-07 | 4 |
posterior neural tube | 7.63e-07 | 15 |
chordal neural plate | 7.63e-07 | 15 |