FFCP PHASE1:Hg19::chr1:158901329..158901366,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:158901329..158901366,+ to FFCP PHASE1:Hg19::chr1:158901329..158901366,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=149628 | |EntrezGene=149628 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28894 | |HGNC=28894 | ||
|TSSclassifier=strong | |||
|UniProt=Q6K0P9 | |UniProt=Q6K0P9 | ||
|association_with_transcript=0bp_to_ENST00000368135,ENST00000368138,ENST00000368140,ENST00000392252,ENST00000392254,NM_152501,NM_198928,NM_198929,NM_198930,uc001fta.3,uc001ftb.2,uc001ftc.2,uc001ftd.2,uc001fte.2_5end | |||
|cluster_id=chr1:158901329..158901366,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_PYHIN1_5end | |||
|id=chr1:158901329..158901366,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.03e-36!119;CL:0000738!9.21e-36!140;CL:0000037!7.29e-30!172;CL:0000566!7.29e-30!172;CL:0002031!7.80e-29!124;CL:0002032!9.21e-28!165;CL:0000837!9.21e-28!165;CL:0000988!1.67e-26!182;CL:0000542!4.79e-26!53;CL:0000051!4.79e-26!53;CL:0000838!2.04e-25!52;CL:0000791!4.36e-17!18;CL:0000789!4.36e-17!18;CL:0002420!4.36e-17!18;CL:0002419!4.36e-17!18;CL:0000790!4.36e-17!18;CL:0000084!6.96e-16!25;CL:0000827!6.96e-16!25;CL:0000625!2.70e-11!11;CL:0002194!1.31e-10!63;CL:0000576!1.31e-10!63;CL:0000040!1.31e-10!63;CL:0000559!1.31e-10!63;CL:0000766!3.87e-10!76;CL:0002009!7.16e-10!65;CL:0000236!2.98e-09!14;CL:0000945!8.24e-09!24;CL:0000826!8.24e-09!24;CL:0000839!2.99e-08!70;CL:0000557!5.82e-08!71;CL:0000763!7.82e-08!112;CL:0000049!7.82e-08!112;CL:0002057!4.95e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.63e-25;18!CL:0000789;1.63e-25;18!CL:0002419;1.63e-25;18!CL:0000542;1.45e-20;53!CL:0000084;2.26e-20;25!CL:0000625;1.42e-16;11!CL:0000236;8.31e-13;13!CL:0002087;5.06e-12;104!CL:0000945;2.79e-10;24!CL:0000624;2.40e-09;6!CL:0000738;2.81e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.97e-33,53;CL:0000051,2.97e-33,53;CL:0000838,2.61e-32,52;CL:0002087,5.77e-32,115;CL:0000738,1.25e-31,136;CL:0000037,5.49e-26,168;CL:0000791,1.59e-25,18;CL:0000789,1.59e-25,18;CL:0002420,1.59e-25,18;CL:0002419,1.59e-25,18;CL:0000790,1.59e-25,18;CL:0002031,9.85e-25,120;CL:0002032,9.53e-24,161;CL:0000837,9.53e-24,161;CL:0000988,1.77e-23,177;CL:0000084,2.28e-20,25;CL:0000827,2.28e-20,25;CL:0000625,1.42e-16,11;CL:0000236,9.02e-14,14;CL:0000945,2.86e-10,24;CL:0000826,2.86e-10,24;CL:0000624,2.36e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.63e-25;18!CL:0000051;1.45e-20;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.77e-22!115;UBERON:0002390!2.18e-14!102;UBERON:0003061!2.18e-14!102;UBERON:0002193!8.82e-13!112;UBERON:0000178!5.52e-09!15;UBERON:0000179!5.52e-09!15;UBERON:0000463!5.52e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.39e-12;15!UBERON:0000179;1.39e-12;15!UBERON:0000463;1.39e-12;15!UBERON:0002390;3.24e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.39e-12,15;UBERON:0000179,1.39e-12,15;UBERON:0000463,1.39e-12,15;UBERON:0002390,9.00e-11,98;UBERON:0003061,9.00e-11,98;UBERON:0002193,3.06e-10,108;UBERON:0007023,5.49e-09,114;UBERON:0004177,6.42e-07,7;UBERON:0005057,6.42e-07,7 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,1.0007329835313,0,0,0,1.89515962028049,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,0.821005894499457,0.865818594450472,9.4407426443737,67.9378034632066,14.0882672217629,0,0,0,13.0144896974907,7.81930778680818,0,18.281848481552,10.4283112684474,12.3696196308036,6.26963327871788,23.6442376193855,11.5909005435384,1.16318591023652,1.13362783106643,0.242584061187816,1.39457422143411,0.411167888021826,0.929119112685311,0.863077176966451,0.256160706529101,0.236482229888585,1.72372840368309,1.93645405075148,1.35426486594342,0.376484679085209,0.545812300115692,0.449446968890169,1.83650335422542,1.92557416245656,0,0.329851300186716,0.199463657621632,0,1.45104619314292,1.13477044938228,0,0.251248665256743,0,0.868755378820466,1.21079900526674,3.68277635987565,2.21523671208619,0.211255286311942,0,0,0,0,0,0,0.79566670879636,0,12.3197371122926,16.3841583378639,6.22656477704488,13.6553671221282,17.6174234295845,14.3688109988621,6.61044872784862,9.54053754535364,6.83055562931338,14.0936925449025,4.58727873750275,0,9.52864557068611,0,44.0629885054986,18.8645166119599,28.3730068619323,150.802218842392,97.1248354568099,90.428530895334,91.5685623517183,164.441834362516,131.688840641252,142.446294217268,281.906822179381,90.304380406601,108.339436517379,13.4839081775014,29.5694519030858,49.846130746429,31.2884648271947,23.5435928718948,28.2245914273437,116.142076265005,85.4581700732284,85.2196064796922,227.970742509572,88.2426197677748,106.777686432453,115.955149422702,121.363545976685,155.119772719155,127.429341083393,130.701043128297,116.600175562789,88.3037535324328,36.6393068223405,27.371812333849,0,0,0,0,0,0,0,0,0,0,0.263504357079378,1.89919659471683,0,0,0.649094787309367,0.870648686496336,0.531831842075461,0.715471872916026,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,11.4780405847809,0,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.936017060556951,0.891786973732369,0,0.335964256397719,0.283550194484773,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0.308482478109971,1.20137223137567,4.0015700568281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,2.41151501647669,0.871533458600294,0.199945982364114,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,29.9267334462718,118.61251764156,42.2630046724654,55.4441916728513,0,0,0,0.167516265334349,0,2.99602809578873,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.6544391576711,26.5328467006899,37.1411901155986,0,0,0,0,0,0.280660094433074,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91555844261345,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0.422215270595328,0,0,0,0.0962221127255121,0,0,3.85989583184795,0,0,0,0,58.8639226709316,43.5843208071154,22.2162402997923,73.6136186164568,73.2224846093426,50.580918273032,62.6436467196213,34.1043825806536,0,0,0,5.01668572839441,0,0.426851060090485,0.159426272728822,0,0.383010740264733,0,0,8.42391534340376,21.4540598291201,0.783399478865116,2.50634477090067,0.677167111206413,0,0,0.425846237690326,0,3.6868891717015,4.02616994206349,3.8375302593739,6.05703095746325,0.278406173895242,0,0,0,1.4098700508785,0,3.80921266106924,0,0.222886768554957,0,0,0.296964680832639,0,0,0.281338832821026,0,0,0,1.19548792950642,19.0635901716492,0,0,1.23084805461069,0,0,0,0,5.62267412130522,33.5276329285716,1.11136990144637,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0.552896299656123,0,0.438770794307945,0,0,1.84680620409113,0,0,0,0,0.31900115973192,0,0.533034776018635,11.241262801531,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,2.65372693510018,2.4441205797345,0,0,0.104421949505455,0.269604531922708,0,0,26.0910348578402,0.19566461893209,0,0.394584402849391,2.41981432097328,0.30607276163049,3.53844845919533,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,1.64881328030313,0,0,0,0,0.253243183823515,0,0,3.41524791582964,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,1.11712960508902,0.687481272035051,0,0,0,0.446342914883745,1.2764859772478,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0,0,0.0607495566580247,0.335434687599266,1.10327990218877,0.157363764404994,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0,0.39669780522807,0,0,13.8823636338003,4.87333345808964,9.1132592176383,17.8619767852302,0,0,0.638341257770182,0,0.7520696820681,0,0,0,0,0.122026264901963,0.3755727921195,0.573409195690071,0.665574309221114,0.248385611765534,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,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| 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| ||
|short_description=p1@PYHIN1 | |||
}} | }} |
Latest revision as of 21:48, 17 September 2015
Short description: | p1@PYHIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PYHIN1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000368135, ENST00000368138, ENST00000368140, ENST00000392252, ENST00000392254, NM_152501, NM_198928, NM_198929, NM_198930, uc001fta.3, uc001ftb.2, uc001ftc.2, uc001ftd.2, uc001fte.2_5end |
EntrezGene: | PYHIN1 |
HGNC: | 28894 |
UniProt: | Q6K0P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.97e-33 | 53 |
common lymphoid progenitor | 2.97e-33 | 53 |
lymphoid lineage restricted progenitor cell | 2.61e-32 | 52 |
nongranular leukocyte | 5.77e-32 | 115 |
leukocyte | 1.25e-31 | 136 |
hematopoietic stem cell | 5.49e-26 | 168 |
mature alpha-beta T cell | 1.59e-25 | 18 |
alpha-beta T cell | 1.59e-25 | 18 |
immature T cell | 1.59e-25 | 18 |
mature T cell | 1.59e-25 | 18 |
immature alpha-beta T cell | 1.59e-25 | 18 |
hematopoietic lineage restricted progenitor cell | 9.85e-25 | 120 |
hematopoietic oligopotent progenitor cell | 9.53e-24 | 161 |
hematopoietic multipotent progenitor cell | 9.53e-24 | 161 |
hematopoietic cell | 1.77e-23 | 177 |
T cell | 2.28e-20 | 25 |
pro-T cell | 2.28e-20 | 25 |
CD8-positive, alpha-beta T cell | 1.42e-16 | 11 |
B cell | 9.02e-14 | 14 |
lymphocyte of B lineage | 2.86e-10 | 24 |
pro-B cell | 2.86e-10 | 24 |
CD4-positive, alpha-beta T cell | 2.36e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 1.39e-12 | 15 |
haemolymphatic fluid | 1.39e-12 | 15 |
organism substance | 1.39e-12 | 15 |
hematopoietic system | 9.00e-11 | 98 |
blood island | 9.00e-11 | 98 |
hemolymphoid system | 3.06e-10 | 108 |
adult organism | 5.49e-09 | 114 |
hemopoietic organ | 6.42e-07 | 7 |
immune organ | 6.42e-07 | 7 |