FFCP PHASE1:Hg19::chr13:67804445..67804475,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5101 | |EntrezGene=5101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8661 | |HGNC=8661 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VT82,Q9HC56 | |UniProt=Q5VT82,Q9HC56 | ||
|association_with_transcript=0bp_to_ENST00000377861,ENST00000456367,ENST00000544246,NM_020403,NM_203487,uc001vik.2,uc001vil.2,uc001vin.3,uc010thl.1_5end | |association_with_transcript=0bp_to_ENST00000377861,ENST00000456367,ENST00000544246,NM_020403,NM_203487,uc001vik.2,uc001vil.2,uc001vin.3,uc010thl.1_5end | ||
|cluster_id=chr13:67804445..67804475,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_PCDH9_5end | |description=CAGE_peak_1_at_PCDH9_5end | ||
|id=chr13:67804445..67804475,- | |id=chr13:67804445..67804475,- | ||
|ontology_enrichment_celltype=CL:0000236!1.01e-07!14 | |ontology_enrichment_celltype=CL:0000236!1.01e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.18e-09;13!CL:0000136;8.18e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.06e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.32e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.11e-32!57;UBERON:0005068!8.11e-32!57;UBERON:0006241!8.11e-32!57;UBERON:0007135!8.11e-32!57;UBERON:0002616!1.42e-31!59;UBERON:0001017!1.55e-31!82;UBERON:0003075!3.80e-30!86;UBERON:0007284!3.80e-30!86;UBERON:0002346!1.17e-29!90;UBERON:0000073!1.63e-29!94;UBERON:0001016!1.63e-29!94;UBERON:0000955!1.65e-29!69;UBERON:0006238!1.65e-29!69;UBERON:0005743!2.59e-29!86;UBERON:0002780!7.57e-25!41;UBERON:0001890!7.57e-25!41;UBERON:0006240!7.57e-25!41;UBERON:0003080!7.59e-25!42;UBERON:0007023!1.16e-23!115;UBERON:0000924!2.61e-23!173;UBERON:0006601!2.61e-23!173;UBERON:0004121!2.90e-23!169;UBERON:0002020!3.43e-22!34;UBERON:0003528!3.43e-22!34;UBERON:0001893!3.45e-22!34;UBERON:0002791!1.76e-21!33;UBERON:0003056!9.75e-21!61;UBERON:0001869!1.09e-20!32;UBERON:0000033!5.73e-20!123;UBERON:0000153!7.60e-20!129;UBERON:0007811!7.60e-20!129;UBERON:0000956!6.28e-16!25;UBERON:0000203!6.28e-16!25;UBERON:0002619!1.08e-14!22;UBERON:0001950!2.00e-13!20;UBERON:0000475!4.13e-10!365;UBERON:0000483!2.38e-09!309;UBERON:0000025!4.40e-09!194;UBERON:0000119!5.45e-09!312;UBERON:0000477!1.39e-08!286;UBERON:0003076!4.17e-08!15;UBERON:0003057!4.17e-08!15;UBERON:0002308!9.14e-08!9;UBERON:0000125!9.14e-08!9;UBERON:0002420!1.01e-07!9;UBERON:0007245!1.01e-07!9;UBERON:0010009!1.01e-07!9;UBERON:0010011!1.01e-07!9;UBERON:0000454!1.01e-07!9;UBERON:0000481!3.55e-07!347;UBERON:0000064!7.93e-07!219;UBERON:0004111!8.03e-07!241;UBERON:0004732!8.78e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.14e-29;34!UBERON:0003528;1.60e-28;34!UBERON:0002020;1.60e-28;34!UBERON:0002791;3.47e-28;32!UBERON:0001869;4.57e-28;32!UBERON:0002780;2.43e-25;41!UBERON:0001890;2.43e-25;41!UBERON:0000956;6.47e-24;25!UBERON:0000203;6.47e-24;25!UBERON:0000073;1.53e-23;53!UBERON:0002616;1.53e-23;53!UBERON:0002619;6.01e-22;22!UBERON:0001950;4.92e-20;20!UBERON:0000955;5.33e-17;68!UBERON:0001017;1.12e-16;75!UBERON:0001016;1.26e-14;83!UBERON:0000125;5.05e-11;9!UBERON:0002308;5.05e-11;9!UBERON:0002420;6.02e-11;9!UBERON:0007245;6.02e-11;9!UBERON:0010009;6.02e-11;9!UBERON:0010011;6.02e-11;9!UBERON:0000454;6.02e-11;9!UBERON:0009663;6.90e-09;7!UBERON:0000200;6.00e-08;6!UBERON:0004732;8.47e-08;13!UBERON:0011216;9.09e-08;132!UBERON:0007023;1.11e-07;114!UBERON:0002298;2.57e-07;6!UBERON:0004733;6.20e-07;12!UBERON:0002028;6.20e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.26e-44,56;UBERON:0005068,4.26e-44,56;UBERON:0006241,4.26e-44,56;UBERON:0007135,4.26e-44,56;UBERON:0000073,6.59e-41,53;UBERON:0002616,6.59e-41,53;UBERON:0003075,5.32e-40,82;UBERON:0007284,5.32e-40,82;UBERON:0001017,1.36e-39,81;UBERON:0002346,3.99e-38,86;UBERON:0001016,8.96e-38,89;UBERON:0000955,1.25e-37,68;UBERON:0006238,1.25e-37,68;UBERON:0002780,2.09e-35,41;UBERON:0001890,2.09e-35,41;UBERON:0003080,2.09e-35,41;UBERON:0006240,2.09e-35,41;UBERON:0003528,1.32e-33,34;UBERON:0002020,1.32e-33,34;UBERON:0001893,1.33e-33,34;UBERON:0002791,2.07e-31,32;UBERON:0001869,2.65e-31,32;UBERON:0010314,5.01e-31,132;UBERON:0010371,1.24e-29,104;UBERON:0003056,6.12e-29,61;UBERON:0004121,1.56e-25,171;UBERON:0000924,1.56e-25,171;UBERON:0006601,1.56e-25,171;UBERON:0000956,5.29e-24,25;UBERON:0000203,5.29e-24,25;UBERON:0002619,4.01e-22,22;UBERON:0007023,3.00e-21,114;UBERON:0001950,3.50e-20,20;UBERON:0011216,3.04e-16,223;UBERON:0000025,6.96e-14,192;UBERON:0000125,5.00e-11,9;UBERON:0002308,5.00e-11,9;UBERON:0000483,5.54e-11,306;UBERON:0002420,5.80e-11,9;UBERON:0007245,5.80e-11,9;UBERON:0010009,5.80e-11,9;UBERON:0010011,5.80e-11,9;UBERON:0000454,5.80e-11,9;UBERON:0000119,1.33e-10,309;UBERON:0003076,8.11e-10,15;UBERON:0003057,8.11e-10,15;UBERON:0004111,1.10e-09,240;UBERON:0009663,6.82e-09,7;UBERON:0000200,6.44e-08,6;UBERON:0004732,6.90e-08,13;UBERON:0002298,1.95e-07,6;UBERON:0004733,5.12e-07,12;UBERON:0002028,5.12e-07,12;UBERON:0007277,5.12e-07,12 | |||
|phase1_expression=5.81370813665781,4.71021152560163,0.704772020479856,5.00366491765652,2.68176656656373,3.48935409640147,0,2.52687949370732,0.783556884599516,0.491467873003018,0,0.436882744260345,0.527533956456907,0.866364470720326,3.97676850873499,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,2.28988789704845,2.46373965131192,2.13422487311165,0.152826811495903,0.492603536699674,0.236132343941038,0.393364276848904,0.767658796194425,0,0,0,0,1.85921281392724,0,2.34880351467878,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,7.64594055766984,7.11607403090844,3.41384178053206,3.60356388332411,9.19603903927173,7.27149360063348,8.58648379081828,1.1384259382189,4.69789751496751,3.05818582500183,2.64342657158052,1.12101712596307,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.289693037921647,0,0.486634870302636,2.17430079477356,0.886917589850256,2.45937399940753,2.68507104770311,0,0.370784442784429,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,1.39133685156694,0,0.347140501607594,1.13061588384802,1.25849830862972,0.825354125820202,0.626984899610432,1.03366703667732,0.71153252537342,0,0,0,0,0,0,0.803697554556718,0.22452937262617,0.563057402416611,3.06633274931766,0,0.183201743930407,0,0,0,0.993943903390637,0.759783069987479,0.794455084879313,2.58152958673932,1.41867352879343,1.12135520028461,0,0,3.7345324247972,2.02066008104532,2.61539044981534,0.756787138224657,4.60940739583999,0.234321431833797,0.312160076830321,0,0.896692083310806,1.05691048779388,0.323745888736263,0.421352420106746,1.42907919878425,1.47401180774122,1.13658359293342,0,0.247266929278557,0,0,0.505008341862199,1.00094815897571,1.93944880838928,1.75591048352335,0.30648779579902,0,1.24775401476023,0.179389635688862,0,0,0,0.103052529238439,1.54584324027377,0.18611685633159,0.506328996723799,0.292311015483596,0.252433774244115,0,0.646584227275248,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.518305275076852,0,0,1.56449532329816,1.28648187638577,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,1.32438929824395,0,1.02940686179115,0,0,0,0,0.651616610620649,0,1.44331342025273,3.82570336417754,3.99189560401794,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.288239906833923,0.12624243342638,0.126995788584338,0,0,0,0.616964956219941,0,0.285826432630578,0,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0,1.41849132023278,0.799266537048298,0.428933980974443,0.542621605391443,0,0.325736184293735,1.42156779497018,2.37585561880029,0,0,0.299918973546171,0,0,0,0.718874566474748,0,0,4.1986578933598,0.821905290201534,17.18985247103,0,0,0,0,0.508189248444927,2.60279707715243,1.54657762555539,1.17261385734044,0.637938751653163,0,0,0,1.96306386750624,0.500170521059677,1.62759014219841,1.03985430765404,3.92543775353756,3.15404830067869,2.92853537481783,0.902838299183157,2.27407504055985,2.0694614258501,0.664225598535437,0.921845842708516,0.521301686808497,0,0.343143423810856,0,0,0.106727557803444,0.909382714338778,0,2.11673205330776,0.744323423456331,7.51963669111506,3.08726103876381,0.896974044789907,1.02341449813341,2.57366273829772,1.48418066444991,1.54209693802656,0.710246901252508,0.821271560138091,1.03850885836724,1.85936605535935,0.120859449591622,0,0,0.459257792658427,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0.915694648183434,0.660075999364704,0,0,0,0.48335359146061,1.54048617114644,1.5350367472613,1.92971201478343,2.68550612170684,1.45016693914229,2.30111894023472,0.178064071293475,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0.869932992075073,1.11194531462352,0.143124886741991,1.86079184679834,2.53103539774981,1.71567174531442,0,0.42793898803392,0.636406495851874,0,0.359744915166629,1.64722217841633,1.88499843753098,0,0,0,0,0,0,0,0.848432591722276,1.13008116620243,0,0,0,0,0.655894752046633,0,0,0,0.430234056612155,1.27723753317057,0,0,0,0,0.75894634753143,0,0,0,0,0.753150406214233,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0.721346064882224,25.9667728221712,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,18.6895203494251,0,0,1.43246690842614,1.18785872333055,4.60741053148848,7.95318118213038,61.0505267221625,0.667852230137435,0,0,0.796991953004279,0,0,0.511343412510774,0.123084805461069,0.311039587661807,0,0,0,0.295930216910801,0,1.11136990144637,24.2333186523805,24.5835460128906,1.99613798001194,0,0,0.724999575434793,0,0.254253650292766,0,4.82640722538051,1.74962768029953,0.520874984799877,3.54296554325536,32.4404419902347,7.62908681585416,21.1206386468639,6.79759523593159,8.33664509185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| ||
|short_description=p1@PCDH9 | |short_description=p1@PCDH9 | ||
}} | }} |
Latest revision as of 21:21, 17 September 2015
Short description: | p1@PCDH9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDH9_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000377861, ENST00000456367, ENST00000544246, NM_020403, NM_203487, uc001vik.2, uc001vil.2, uc001vin.3, uc010thl.1_5end |
EntrezGene: | PCDH9 |
HGNC: | 8661 |
UniProt: | Q5VT82Q9HC56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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B cell | 1.06e-08 | 14 |