FFCP PHASE1:Hg19::chr1:36771641..36771644,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79729 | |EntrezGene=79729 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26236 | |HGNC=26236 | ||
|TSSclassifier=strong | |||
|UniProt=B5MDU9 | |UniProt=B5MDU9 | ||
|association_with_transcript=-343bp_to_ENST00000373139_5end | |association_with_transcript=-343bp_to_ENST00000373139_5end | ||
|cluster_id=chr1:36771641..36771644,+ | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_11_at_SH3D21_5end | |description=CAGE_peak_11_at_SH3D21_5end | ||
|id=chr1:36771641..36771644,+ | |id=chr1:36771641..36771644,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.49e-79;5 | |||
|ontology_enrichment_disease=DOID:3112!5.79e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002046!1.67e-22!5;UBERON:0004117!1.67e-22!5;UBERON:0007689!1.67e-22!5;UBERON:0007123!1.67e-22!5;UBERON:0003091!1.67e-22!5;UBERON:0000341!1.47e-14!2;UBERON:0008814!2.12e-11!15;UBERON:0009722!2.56e-10!11;UBERON:0007690!2.56e-10!11;UBERON:0002171!2.90e-08!1;UBERON:0006518!2.90e-08!1;UBERON:0008949!2.90e-08!1;UBERON:0000101!2.90e-08!1;UBERON:0002167!2.90e-08!1;UBERON:0000997!8.69e-08!1;UBERON:0005056!8.69e-08!1;UBERON:0001882!1.14e-07!1;UBERON:0005403!1.14e-07!1;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0000065!4.12e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;3.49e-79;5!UBERON:0002368;1.70e-11;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,3.49e-79,5;UBERON:0004117,3.49e-79,5;UBERON:0007689,3.49e-79,5;UBERON:0007123,3.49e-79,5;UBERON:0003091,3.49e-79,5;UBERON:0009722,6.80e-37,11;UBERON:0007690,6.80e-37,11;UBERON:0008814,3.88e-23,18;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0003929,1.34e-08,54;UBERON:0002530,5.66e-08,59 | |||
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|short_description=p11@SH3D21 | |short_description=p11@SH3D21 | ||
}} | }} |
Latest revision as of 20:49, 17 September 2015
Short description: | p11@SH3D21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SH3D21_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | -343bp_to_ENST00000373139_5end |
EntrezGene: | SH3D21 |
HGNC: | 26236 |
UniProt: | B5MDU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 3.49e-79 | 5 |
pharyngeal pouch | 3.49e-79 | 5 |
thyroid diverticulum | 3.49e-79 | 5 |
pharyngeal pouch 2 | 3.49e-79 | 5 |
thyroid primordium | 3.49e-79 | 5 |
entire pharyngeal arch endoderm | 6.80e-37 | 11 |
early pharyngeal endoderm | 6.80e-37 | 11 |
pharyngeal arch system | 3.88e-23 | 18 |
endocrine gland | 1.42e-12 | 35 |
endocrine system | 4.55e-10 | 45 |
gut epithelium | 1.34e-08 | 54 |
gland | 5.66e-08 | 59 |