FFCP PHASE1:Hg19::chr19:3933060..3933081,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:3933060..3933081,+
|short_description=p3@ITGB1BP3
|description=CAGE_peak_3_at_ITGB1BP3_5end
|association_with_transcript=-19bp_to_ENST00000168977,NM_17067...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27231 | |EntrezGene=27231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17871 | |HGNC=17871 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPI5 | |UniProt=Q9NPI5 | ||
|association_with_transcript=-19bp_to_ENST00000168977,NM_170678,uc002lyz.3_5end | |||
|cluster_id=chr19:3933060..3933081,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_3_at_ITGB1BP3_5end | |||
|id=chr19:3933060..3933081,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.38e-21!5;CL:0000147!5.87e-10!14;CL:0000039!1.20e-09!7;CL:0000586!1.20e-09!7;CL:0000540!6.81e-07!6;CL:0000031!6.81e-07!6;CL:0000404!6.81e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.37e-63;5!CL:0002321;4.05e-21;15!CL:0000540;2.57e-19;6!CL:0000404;2.57e-19;6!CL:0000039;1.39e-16;7!CL:0000586;1.39e-16;7!CL:0000147;1.44e-14;14!CL:0000148;5.60e-12;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.10e-63,5;CL:0000540,2.66e-19,6;CL:0000031,2.66e-19,6;CL:0000404,2.66e-19,6;CL:0000039,1.36e-16,7;CL:0000586,1.36e-16,7;CL:0000047,1.22e-14,8;CL:0000147,1.46e-14,14;CL:0000148,5.60e-12,10;CL:0000541,5.60e-12,10;CL:0000133,4.55e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;2.57e-19;6!UBERON:0004140;1.72e-13;1!UBERON:0009117;8.58e-12;10!UBERON:0005564;8.58e-12;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!4.01e-09!11;UBERON:0000473!1.93e-08!8;UBERON:0000966!5.75e-08!5;UBERON:0005388!5.75e-08!5;UBERON:0001802!5.75e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.37e-14;8!UBERON:0000922;2.66e-13;49!UBERON:0003135;8.98e-11;11!UBERON:0000966;1.12e-10;5!UBERON:0005388;1.12e-10;5!UBERON:0001802;1.12e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.34e-14,8;UBERON:0003135,8.83e-11,11;UBERON:0000966,4.55e-09,6;UBERON:0005388,4.55e-09,6;UBERON:0001802,4.55e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7336861394044,7.68672656264614,7.08783051504062,3.21349270547648,5.80337957013945,4.74470566798579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53870075069834,0,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0,1.74677028465488,0,0,0,0,0,0,0,0,0,2.57205037544031,4.40126197111148,4.98528405635022,0,0,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85839014859306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.218531143927391,0,2.75369840303351,3.20660886318673,4.77853477581194,0.250707539292375,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7336861394044,7.68672656264614,7.08783051504062,3.21349270547648,5.80337957013945,4.74470566798579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53870075069834,0,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0,1.74677028465488,0,0,0,0,0,0,0,0,0,2.57205037544031,4.40126197111148,4.98528405635022,0,0,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85839014859306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.218531143927391,0,2.75369840303351,3.20660886318673,4.77853477581194,0.250707539292375,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ITGB1BP3 | |||
}} | }} |
Latest revision as of 20:35, 17 September 2015
Short description: | p3@ITGB1BP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITGB1BP3_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -19bp_to_ENST00000168977, NM_170678, uc002lyz.3_5end |
EntrezGene: | ITGB1BP3 |
HGNC: | 17871 |
UniProt: | Q9NPI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.10e-63 | 5 |
neuron | 2.66e-19 | 6 |
neuroblast | 2.66e-19 | 6 |
electrically signaling cell | 2.66e-19 | 6 |
germ line cell | 1.36e-16 | 7 |
germ cell | 1.36e-16 | 7 |
neuronal stem cell | 1.22e-14 | 8 |
pigment cell | 1.46e-14 | 14 |
melanocyte | 5.60e-12 | 10 |
melanoblast | 5.60e-12 | 10 |
neurectodermal cell | 4.55e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 1.34e-14 | 8 |
male reproductive organ | 8.83e-11 | 11 |
retina | 4.55e-09 | 6 |
photoreceptor array | 4.55e-09 | 6 |
posterior segment of eyeball | 4.55e-09 | 6 |