FFCP PHASE1:Hg19::chr1:158260608..158260628,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=911 | |EntrezGene=911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1636 | |HGNC=1636 | ||
|TSSclassifier=strong | |||
|UniProt=B4DP91 | |UniProt=B4DP91 | ||
|association_with_transcript=182bp_to_ENST00000454192_5end | |association_with_transcript=182bp_to_ENST00000454192_5end | ||
|cluster_id=chr1:158260608..158260628,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_2_at_CD1C_5end | |description=CAGE_peak_2_at_CD1C_5end | ||
|id=chr1:158260608..158260628,+ | |id=chr1:158260608..158260628,+ | ||
|ontology_enrichment_celltype=CL:0002087!5.34e-39!119;CL:0000738!6.44e-38!140;CL:0002057!2.67e-34!42;CL:0000037!5.73e-34!172;CL:0000566!5.73e-34!172;CL:0002031!2.50e-33!124;CL:0000860!1.66e-31!45;CL:0000988!2.69e-31!182;CL:0002009!4.62e-31!65;CL:0002194!3.54e-30!63;CL:0000576!3.54e-30!63;CL:0000040!3.54e-30!63;CL:0000559!3.54e-30!63;CL:0002032!7.75e-30!165;CL:0000837!7.75e-30!165;CL:0000557!1.05e-27!71;CL:0000766!2.99e-27!76;CL:0000839!2.53e-26!70;CL:0000763!4.30e-22!112;CL:0000049!4.30e-22!112;CL:0000236!1.73e-17!14;CL:0000840!5.15e-11!5;CL:0001029!5.15e-11!5;CL:0002393!2.77e-10!9;CL:0002397!2.77e-10!9;CL:0000134!1.52e-09!358;CL:0000945!2.99e-09!24;CL:0000826!2.99e-09!24;CL:0002320!4.20e-09!365;CL:0000842!5.34e-08!3;CL:0000838!1.17e-07!52;CL:0000219!1.46e-07!390;CL:0000542!1.90e-07!53;CL:0000051!1.90e-07!53;CL:0000990!3.42e-07!8 | |ontology_enrichment_celltype=CL:0002087!5.34e-39!119;CL:0000738!6.44e-38!140;CL:0002057!2.67e-34!42;CL:0000037!5.73e-34!172;CL:0000566!5.73e-34!172;CL:0002031!2.50e-33!124;CL:0000860!1.66e-31!45;CL:0000988!2.69e-31!182;CL:0002009!4.62e-31!65;CL:0002194!3.54e-30!63;CL:0000576!3.54e-30!63;CL:0000040!3.54e-30!63;CL:0000559!3.54e-30!63;CL:0002032!7.75e-30!165;CL:0000837!7.75e-30!165;CL:0000557!1.05e-27!71;CL:0000766!2.99e-27!76;CL:0000839!2.53e-26!70;CL:0000763!4.30e-22!112;CL:0000049!4.30e-22!112;CL:0000236!1.73e-17!14;CL:0000840!5.15e-11!5;CL:0001029!5.15e-11!5;CL:0002393!2.77e-10!9;CL:0002397!2.77e-10!9;CL:0000134!1.52e-09!358;CL:0000945!2.99e-09!24;CL:0000826!2.99e-09!24;CL:0002320!4.20e-09!365;CL:0000842!5.34e-08!3;CL:0000838!1.17e-07!52;CL:0000219!1.46e-07!390;CL:0000542!1.90e-07!53;CL:0000051!1.90e-07!53;CL:0000990!3.42e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.07e-31;13!CL:0002393;1.19e-17;6!CL:0002397;1.19e-17;6!CL:0000945;2.27e-16;24!CL:0000840;5.01e-11;5!CL:0000576;1.67e-08;48!CL:0000542;8.92e-08;53!CL:0000990;1.69e-07;8!CL:0000738;2.94e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,7.09e-29,14;CL:0002087,5.92e-26,115;CL:0000738,1.62e-23,136;CL:0002031,2.02e-22,120;CL:0000037,3.29e-18,168;CL:0000988,4.66e-17,177;CL:0000945,2.11e-16,24;CL:0000826,2.11e-16,24;CL:0002194,2.16e-16,59;CL:0000576,2.16e-16,59;CL:0000040,2.16e-16,59;CL:0000559,2.16e-16,59;CL:0002009,8.76e-16,61;CL:0002032,1.15e-15,161;CL:0000837,1.15e-15,161;CL:0000839,2.02e-14,66;CL:0000557,3.58e-14,67;CL:0000860,3.90e-14,42;CL:0002057,3.90e-14,42;CL:0000766,4.94e-13,72;CL:0000473,3.71e-12,48;CL:0000234,3.71e-12,48;CL:0002393,5.52e-12,9;CL:0002397,5.52e-12,9;CL:0000840,5.28e-11,5;CL:0001029,5.28e-11,5;CL:0000838,6.80e-09,52;CL:0000542,1.06e-08,53;CL:0000051,1.06e-08,53;CL:0000763,6.38e-08,108;CL:0000049,6.38e-08,108;CL:0000990,1.75e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.01e-09;42!CL:0000051;8.92e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.23e-36!102;UBERON:0003061!1.23e-36!102;UBERON:0002193!5.24e-34!112;UBERON:0002371!1.28e-23!80;UBERON:0002405!7.68e-23!115;UBERON:0001474!2.26e-21!86;UBERON:0004765!6.16e-17!101;UBERON:0001434!6.16e-17!101;UBERON:0003081!1.03e-13!216;UBERON:0000178!1.75e-09!15;UBERON:0000179!1.75e-09!15;UBERON:0000463!1.75e-09!15;UBERON:0002384!1.67e-08!375;UBERON:0002204!8.67e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!1.23e-36!102;UBERON:0003061!1.23e-36!102;UBERON:0002193!5.24e-34!112;UBERON:0002371!1.28e-23!80;UBERON:0002405!7.68e-23!115;UBERON:0001474!2.26e-21!86;UBERON:0004765!6.16e-17!101;UBERON:0001434!6.16e-17!101;UBERON:0003081!1.03e-13!216;UBERON:0000178!1.75e-09!15;UBERON:0000179!1.75e-09!15;UBERON:0000463!1.75e-09!15;UBERON:0002384!1.67e-08!375;UBERON:0002204!8.67e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.79e-15;2!UBERON:0005058;2.79e-15;2!UBERON:0009113;2.79e-15;2!UBERON:0004177;4.53e-13;5!UBERON:0005057;4.53e-13;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.62e-18,98;UBERON:0003061,2.62e-18,98;UBERON:0002193,2.67e-16,108;UBERON:0002405,3.63e-15,93;UBERON:0002371,3.16e-12,76;UBERON:0001474,3.64e-11,82;UBERON:0004765,5.73e-10,90;UBERON:0004177,1.79e-09,7;UBERON:0005057,1.79e-09,7;UBERON:0001434,9.68e-09,100;UBERON:0003081,4.17e-08,203;UBERON:0002370,4.56e-08,4;UBERON:0005058,4.56e-08,4;UBERON:0009113,4.56e-08,4;UBERON:0003295,4.56e-08,4;UBERON:0005562,4.56e-08,4;UBERON:0000974,6.75e-07,10 | |||
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| ||
|short_description=p2@CD1C | |short_description=p2@CD1C | ||
}} | }} |
Latest revision as of 20:32, 17 September 2015
Short description: | p2@CD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD1C_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 182bp_to_ENST00000454192_5end |
EntrezGene: | CD1C |
HGNC: | 1636 |
UniProt: | B4DP91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.62e-18 | 98 |
blood island | 2.62e-18 | 98 |
hemolymphoid system | 2.67e-16 | 108 |
immune system | 3.63e-15 | 93 |
bone marrow | 3.16e-12 | 76 |
bone element | 3.64e-11 | 82 |
skeletal element | 5.73e-10 | 90 |
hemopoietic organ | 1.79e-09 | 7 |
immune organ | 1.79e-09 | 7 |
skeletal system | 9.68e-09 | 100 |
lateral plate mesoderm | 4.17e-08 | 203 |
thymus | 4.56e-08 | 4 |
hemolymphoid system gland | 4.56e-08 | 4 |
thymic region | 4.56e-08 | 4 |
pharyngeal gland | 4.56e-08 | 4 |
thymus primordium | 4.56e-08 | 4 |
neck | 6.75e-07 | 10 |