FFCP PHASE1:Hg19::chr2:162272716..162272753,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10716 | |EntrezGene=10716 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11590 | |HGNC=11590 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-88bp_to_ENST00000463544_5end | |association_with_transcript=-88bp_to_ENST00000463544_5end | ||
|cluster_id=chr2:162272716..162272753,+ | |||
|coexpression_cluster_id=C1619 | |coexpression_cluster_id=C1619 | ||
|description=CAGE_peak_3_at_TBR1_5end | |description=CAGE_peak_3_at_TBR1_5end | ||
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|ontology_enrichment_celltype=CL:0000047!1.59e-12!8;CL:0000540!6.68e-11!6;CL:0000031!6.68e-11!6;CL:0000404!6.68e-11!6 | |ontology_enrichment_celltype=CL:0000047!1.59e-12!8;CL:0000540!6.68e-11!6;CL:0000031!6.68e-11!6;CL:0000404!6.68e-11!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.45e-08;6!CL:0000404;1.45e-08;6 | |ontology_enrichment_celltype_v019=CL:0000540;1.45e-08;6!CL:0000404;1.45e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.63e-11,8;CL:0000540,1.38e-08,6;CL:0000031,1.38e-08,6;CL:0000404,1.38e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.08e-10;82!CL:0000031;1.45e-08;6!UBERON:0006238;1.05e-07;10 | |ontology_enrichment_development_v019=UBERON:0006601;2.08e-10;82!CL:0000031;1.45e-08;6!UBERON:0006238;1.05e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@TBR1 | |short_description=p3@TBR1 | ||
}} | }} |
Latest revision as of 20:31, 17 September 2015
Short description: | p3@TBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TBR1_5end |
Coexpression cluster: | C1619_medulloblastoma_occipital_duodenum_Neural_parietal_temporal_Neurons |
Association with transcript: | -88bp_to_ENST00000463544_5end |
EntrezGene: | TBR1 |
HGNC: | 11590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.63e-11 | 8 |
neuron | 1.38e-08 | 6 |
neuroblast | 1.38e-08 | 6 |
electrically signaling cell | 1.38e-08 | 6 |