FFCP PHASE1:Hg19::chr19:39108644..39108658,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:39108644..39108658,- to FFCP PHASE1:Hg19::chr19:39108644..39108658,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11184 | |EntrezGene=11184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6863 | |HGNC=6863 | ||
|TSSclassifier=strong | |||
|UniProt=Q92918 | |UniProt=Q92918 | ||
|association_with_transcript=-1bp_to_ENST00000221409,ENST00000396857,NM_001042600,NM_007181,uc002oix.1,uc002oiy.1_5end | |||
|cluster_id=chr19:39108644..39108658,- | |||
|description=CAGE_peak_2_at_MAP4K1_5end | |||
|id=chr19:39108644..39108658,- | |||
|ontology_enrichment_celltype=CL:0000037!2.78e-72!172;CL:0000566!2.78e-72!172;CL:0000988!2.54e-69!182;CL:0002032!4.86e-66!165;CL:0000837!4.86e-66!165;CL:0000738!3.71e-65!140;CL:0002087!3.64e-60!119;CL:0002031!2.15e-57!124;CL:0000542!4.01e-45!53;CL:0000051!4.01e-45!53;CL:0000838!4.03e-44!52;CL:0000763!4.65e-24!112;CL:0000049!4.65e-24!112;CL:0000945!2.01e-23!24;CL:0000826!2.01e-23!24;CL:0000084!2.03e-19!25;CL:0000827!2.03e-19!25;CL:0000557!1.81e-18!71;CL:0000766!1.93e-18!76;CL:0000839!3.37e-17!70;CL:0000791!1.59e-16!18;CL:0000789!1.59e-16!18;CL:0002420!1.59e-16!18;CL:0002419!1.59e-16!18;CL:0000790!1.59e-16!18;CL:0002194!6.73e-16!63;CL:0000576!6.73e-16!63;CL:0000040!6.73e-16!63;CL:0000559!6.73e-16!63;CL:0002009!1.10e-15!65;CL:0000236!5.20e-14!14;CL:0002057!5.32e-14!42;CL:0000860!2.59e-12!45;CL:0000134!6.52e-12!358;CL:0002320!5.84e-11!365;CL:0000625!1.15e-10!11;CL:0000219!1.27e-09!390 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.23e-38;53!CL:0000945;6.29e-35;24!CL:0000084;4.39e-29;25!CL:0000791;3.04e-24;18!CL:0000789;3.04e-24;18!CL:0002419;3.04e-24;18!CL:0000236;2.09e-19;13!CL:0000625;2.37e-15;11!CL:0002087;4.10e-15;104!CL:0000738;1.30e-10;136!CL:0000988;1.53e-10;177!CL:0000624;4.93e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.70e-69,53;CL:0000051,5.70e-69,53;CL:0000838,2.01e-67,52;CL:0000037,9.10e-63,168;CL:0000988,5.43e-61,177;CL:0000738,4.24e-55,136;CL:0002032,5.75e-55,161;CL:0000837,5.75e-55,161;CL:0002087,9.32e-52,115;CL:0002031,4.21e-46,120;CL:0000945,3.87e-35,24;CL:0000826,3.87e-35,24;CL:0000084,2.59e-29,25;CL:0000827,2.59e-29,25;CL:0000791,1.61e-24,18;CL:0000789,1.61e-24,18;CL:0002420,1.61e-24,18;CL:0002419,1.61e-24,18;CL:0000790,1.61e-24,18;CL:0000236,1.18e-20,14;CL:0000625,1.62e-15,11;CL:0000134,2.11e-15,354;CL:0002320,1.37e-14,361;CL:0000219,8.89e-12,386;CL:0000624,4.05e-09,6;CL:0000034,4.44e-09,441;CL:0000763,6.61e-09,108;CL:0000049,6.61e-09,108;CL:0000048,7.40e-09,427;CL:0000723,2.10e-08,433 | |||
|ontology_enrichment_development_v019=CL:0000051;1.23e-38;53!CL:0000790;3.04e-24;18 | |||
|ontology_enrichment_disease=DOID:2531!4.05e-19!51;DOID:0060083!4.05e-19!51;DOID:1240!2.69e-13!39;DOID:0060058!2.01e-08!10;DOID:8692!2.72e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;5.64e-14;51!DOID:0060083;5.64e-14;51!DOID:0060058;1.80e-12;10!DOID:1240;3.22e-12;39!DOID:8692;1.98e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.30e-23,51;DOID:0060083,1.30e-23,51;DOID:1240,1.15e-15,39;DOID:0060058,2.03e-12,10;DOID:8692,1.13e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.34e-28!102;UBERON:0003061!1.34e-28!102;UBERON:0002193!5.31e-26!112;UBERON:0002371!3.32e-16!80;UBERON:0001474!7.31e-14!86;UBERON:0002405!9.72e-14!115;UBERON:0002384!2.84e-10!375;UBERON:0004765!7.10e-10!101;UBERON:0001434!7.10e-10!101;UBERON:0000178!1.31e-09!15;UBERON:0000179!1.31e-09!15;UBERON:0000463!1.31e-09!15;UBERON:0004177!3.27e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.03e-12;15!UBERON:0000179;2.03e-12;15!UBERON:0000463;2.03e-12;15!UBERON:0002390;2.59e-12;32!UBERON:0002193;1.03e-07;42!UBERON:0004177;1.15e-07;5!UBERON:0005057;1.15e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.09e-14,98;UBERON:0003061,2.09e-14,98;UBERON:0002193,7.97e-14,108;UBERON:0002384,1.71e-13,371;UBERON:0000178,1.10e-12,15;UBERON:0000179,1.10e-12,15;UBERON:0000463,1.10e-12,15;UBERON:0004177,3.12e-10,7;UBERON:0005057,3.12e-10,7;UBERON:0002405,4.12e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0733181081763,11.6582837018923,12.9872789167571,1.18009283054671,2.30297638858328,1.85779347979291,0,0,0,5.19030243888021,8.53015394924529,1.17440175733939,1.66198622559563,1.00272223735071,1.95309783644267,0.671746422719773,2.59114932815184,0.257575567634187,0,0.755751887377619,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0.575384784644301,0.768482119587302,0.709446689665756,0.689491361473237,0.645484683583826,0,0.752969358170419,0,0.449446968890169,0.918251677112708,2.24650318953266,0.639337125799041,0.329851300186716,1.39624560335142,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,0,1.0429658368404,0.217188844705117,1.21079900526674,0.368277635987565,0.316462387440884,1.05627643155971,1.06302149982522,0,1.23561494261145,1.95229960693958,2.25015821375912,1.14005097496499,0.79566670879636,1.0959849225878,5.27988733383968,3.82297027883492,7.11607403090844,5.54749289336459,7.60752375368424,8.04653415936277,6.61044872784862,2.86216126360609,7.96898156753228,5.87237189370939,9.55683070313072,1.32171328579026,3.36305137788922,3.16060901730092,3.540775862049,6.6811829667358,5.55124047298675,5.3499678525017,4.88883399950386,1.4203434172042,5.84480185223734,6.12757512868455,2.65145316727353,2.65840673500345,5.41607727530031,7.17311390463781,5.46249259751489,4.27538551969558,3.86890024900188,3.18783394308558,4.44859689486181,4.28065324943541,4.18142095219907,5.55215779218074,3.83220493601921,4.81078423675682,3.54227568827304,5.09704662918555,2.60433381542567,3.8018081777935,4.36667845325541,4.99147783502232,3.74792179657038,4.97232229292435,5.74789597844733,4.23374160771938,4.81392352410313,4.92402973201517,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.348259474598534,0.930705723632056,5.00830311041218,3.43196946468077,5.57186251994347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.662648841607426,0.464775771478074,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,6.18048339180511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.594524649154913,0,0,0,0,0,0,0.492663237895943,0.616339038092582,1.03664057770386,1.72943944100354,1.76739406796932,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,6.94927892759869,2.56139988262505,3.66566877261179,2.95188983443421,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,4.09856981555372,3.62873696531711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,2.53723804616085,1.52927441428475,2.84823593587081,2.85878130549347,2.87953591160336,3.8908398671563,2.70015718619057,2.37937552888281,0,0,0,5.945701604023,2.01976898167023,1.56512055366511,2.07254154547469,1.39705560002972,1.34053759092657,2.32840940996271,1.94773164164733,1.12318871245384,4.33645890163065,0,10.0253790836027,1.18504244461122,1.4452926759333,2.01799707191048,2.12923118845163,0,1.84344458585075,2.90778940260141,1.50164227540718,3.32159762183469,0,1.23087398947712,0.270455678475983,0.33307196799782,1.4098700508785,0,0.146508179271894,0,4.01196183398922,0,0,0.296964680832639,0,0,0,0,0,0,0,6.63081397274754,0,0,7.38508832766417,0,0,0,1.02314474045374,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,1.72371686620732,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,2.04386596391473,0.31396051279005,0.166211681900156,0,0,0,0,0.476809736941136,0,0,0,0,0.995261931078505,0.707660516026713,1.22206028986725,0.296521128680622,2.71840665682306,1.46190729307638,0.337005664903385,0,0,5.83855325490131,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,3.94331031418972,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0,4.74170659568393,0,0,0.160753148465019,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,1.32506888912221,0,0.13223260174269,0,0,0.427149650270779,0.157204305099666,0.414239055347196,3.96932817449561,3.35939774226505,7.55114109961555,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0.327130788511688,0,0,0,3.59977312538874,0.533458648470704,1.89436477626897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0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| 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| ||
|short_description=p2@MAP4K1 | |||
}} | }} |
Latest revision as of 20:02, 17 September 2015
Short description: | p2@MAP4K1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MAP4K1_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000221409, ENST00000396857, NM_001042600, NM_007181, uc002oix.1, uc002oiy.1_5end |
EntrezGene: | MAP4K1 |
HGNC: | 6863 |
UniProt: | Q92918 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.70e-69 | 53 |
common lymphoid progenitor | 5.70e-69 | 53 |
lymphoid lineage restricted progenitor cell | 2.01e-67 | 52 |
hematopoietic stem cell | 9.10e-63 | 168 |
hematopoietic cell | 5.43e-61 | 177 |
leukocyte | 4.24e-55 | 136 |
hematopoietic oligopotent progenitor cell | 5.75e-55 | 161 |
hematopoietic multipotent progenitor cell | 5.75e-55 | 161 |
nongranular leukocyte | 9.32e-52 | 115 |
hematopoietic lineage restricted progenitor cell | 4.21e-46 | 120 |
lymphocyte of B lineage | 3.87e-35 | 24 |
pro-B cell | 3.87e-35 | 24 |
T cell | 2.59e-29 | 25 |
pro-T cell | 2.59e-29 | 25 |
mature alpha-beta T cell | 1.61e-24 | 18 |
alpha-beta T cell | 1.61e-24 | 18 |
immature T cell | 1.61e-24 | 18 |
mature T cell | 1.61e-24 | 18 |
immature alpha-beta T cell | 1.61e-24 | 18 |
B cell | 1.18e-20 | 14 |
CD8-positive, alpha-beta T cell | 1.62e-15 | 11 |
mesenchymal cell | 2.11e-15 | 354 |
connective tissue cell | 1.37e-14 | 361 |
motile cell | 8.89e-12 | 386 |
CD4-positive, alpha-beta T cell | 4.05e-09 | 6 |
stem cell | 4.44e-09 | 441 |
myeloid cell | 6.61e-09 | 108 |
common myeloid progenitor | 6.61e-09 | 108 |
multi fate stem cell | 7.40e-09 | 427 |
somatic stem cell | 2.10e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.09e-14 | 98 |
blood island | 2.09e-14 | 98 |
hemolymphoid system | 7.97e-14 | 108 |
connective tissue | 1.71e-13 | 371 |
blood | 1.10e-12 | 15 |
haemolymphatic fluid | 1.10e-12 | 15 |
organism substance | 1.10e-12 | 15 |
hemopoietic organ | 3.12e-10 | 7 |
immune organ | 3.12e-10 | 7 |
immune system | 4.12e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.30e-23 | 51 |
immune system cancer | 1.30e-23 | 51 |
leukemia | 1.15e-15 | 39 |
lymphoma | 2.03e-12 | 10 |
myeloid leukemia | 1.13e-08 | 31 |