FFCP PHASE1:Hg19::chr12:21757774..21757796,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2998 | |EntrezGene=2998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4707 | |HGNC=4707 | ||
|TSSclassifier=strong | |||
|UniProt=P54840 | |UniProt=P54840 | ||
|association_with_transcript=0bp_to_ENST00000261195,NM_021957,uc001rfb.2_5end | |association_with_transcript=0bp_to_ENST00000261195,NM_021957,uc001rfb.2_5end | ||
|cluster_id=chr12:21757774..21757796,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_GYS2_5end | |description=CAGE_peak_1_at_GYS2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000136!2.55e-12!15 | |ontology_enrichment_celltype=CL:0000136!2.55e-12!15 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.15e-12;12!CL:0000136;4.39e-11;13 | |ontology_enrichment_celltype_v019=CL:0000182;3.15e-12;12!CL:0000136;4.39e-11;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.09e-12,12;CL:0000136,1.10e-09,15 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.84e-16;1 | |ontology_enrichment_development_v019=UBERON:0009143;2.84e-16;1 | ||
|ontology_enrichment_disease=DOID:178!1.53e-08!1;DOID:326!1.53e-08!1;DOID:3978!1.53e-08!1;DOID:3394!1.53e-08!1;DOID:5844!1.53e-08!1 | |ontology_enrichment_disease=DOID:178!1.53e-08!1;DOID:326!1.53e-08!1;DOID:3978!1.53e-08!1;DOID:3394!1.53e-08!1;DOID:5844!1.53e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!4.07e-10!26;UBERON:0002107!4.67e-10!19;UBERON:0006925!4.67e-10!19;UBERON:0008836!4.67e-10!19;UBERON:0001831!9.74e-09!1;UBERON:0001567!9.74e-09!1;UBERON:0008801!9.74e-09!1;UBERON:0008835!1.18e-08!22;UBERON:0003894!1.18e-08!22;UBERON:0002365!1.94e-08!31;UBERON:0002330!1.94e-08!31;UBERON:0002372!2.22e-08!1;UBERON:0001961!2.22e-08!1;UBERON:0001744!2.22e-08!1;UBERON:0001735!2.22e-08!1;UBERON:0009854!2.88e-08!23;UBERON:0007499!1.38e-07!25;UBERON:0009497!1.38e-07!25;UBERON:0000015!1.38e-07!25;UBERON:0002423!1.38e-07!25;UBERON:0006235!1.38e-07!25;UBERON:0004161!1.38e-07!25;UBERON:0001041!2.51e-07!98;UBERON:0009856!2.77e-07!26;UBERON:0000077!2.81e-07!130;UBERON:0004921!2.81e-07!129;UBERON:0004185!2.81e-07!129;UBERON:0007023!5.01e-07!115 | |ontology_enrichment_uberon=UBERON:0005057!4.07e-10!26;UBERON:0002107!4.67e-10!19;UBERON:0006925!4.67e-10!19;UBERON:0008836!4.67e-10!19;UBERON:0001831!9.74e-09!1;UBERON:0001567!9.74e-09!1;UBERON:0008801!9.74e-09!1;UBERON:0008835!1.18e-08!22;UBERON:0003894!1.18e-08!22;UBERON:0002365!1.94e-08!31;UBERON:0002330!1.94e-08!31;UBERON:0002372!2.22e-08!1;UBERON:0001961!2.22e-08!1;UBERON:0001744!2.22e-08!1;UBERON:0001735!2.22e-08!1;UBERON:0009854!2.88e-08!23;UBERON:0007499!1.38e-07!25;UBERON:0009497!1.38e-07!25;UBERON:0000015!1.38e-07!25;UBERON:0002423!1.38e-07!25;UBERON:0006235!1.38e-07!25;UBERON:0004161!1.38e-07!25;UBERON:0001041!2.51e-07!98;UBERON:0009856!2.77e-07!26;UBERON:0000077!2.81e-07!130;UBERON:0004921!2.81e-07!129;UBERON:0004185!2.81e-07!129;UBERON:0007023!5.01e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.28e-20;19!UBERON:0006925;2.28e-20;19!UBERON:0002423;1.67e-15;25!UBERON:0002365;1.72e-12;31!UBERON:0002330;1.72e-12;31!UBERON:0002368;7.77e-11;33!UBERON:0000949;5.94e-08;43 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.28e-20;19!UBERON:0006925;2.28e-20;19!UBERON:0002423;1.67e-15;25!UBERON:0002365;1.72e-12;31!UBERON:0002330;1.72e-12;31!UBERON:0002368;7.77e-11;33!UBERON:0000949;5.94e-08;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.24e-20,19;UBERON:0006925,2.24e-20,19;UBERON:0008836,2.24e-20,19;UBERON:0008835,1.30e-17,22;UBERON:0003894,1.30e-17,22;UBERON:0009854,7.50e-17,23;UBERON:0007499,1.65e-15,25;UBERON:0009497,1.65e-15,25;UBERON:0000015,1.65e-15,25;UBERON:0002423,1.65e-15,25;UBERON:0006235,1.65e-15,25;UBERON:0004161,1.65e-15,25;UBERON:0009856,6.48e-15,26;UBERON:0002365,1.62e-12,31;UBERON:0002330,1.62e-12,31;UBERON:0002368,4.35e-11,35;UBERON:0000949,1.28e-08,45;UBERON:0001041,3.56e-08,87;UBERON:0003929,3.57e-07,54;UBERON:0005172,3.57e-07,54;UBERON:0005173,3.57e-07,54 | |||
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|short_description=p1@GYS2 | |short_description=p1@GYS2 | ||
}} | }} |
Latest revision as of 19:52, 17 September 2015
Short description: | p1@GYS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GYS2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000261195, NM_021957, uc001rfb.2_5end |
EntrezGene: | GYS2 |
HGNC: | 4707 |
UniProt: | P54840 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.09e-12 | 12 |
fat cell | 1.10e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
liver | 2.24e-20 | 19 |
digestive gland | 2.24e-20 | 19 |
liver bud | 2.24e-20 | 19 |
hepatic diverticulum | 1.30e-17 | 22 |
liver primordium | 1.30e-17 | 22 |
digestive tract diverticulum | 7.50e-17 | 23 |
epithelial sac | 1.65e-15 | 25 |
epithelium of foregut-midgut junction | 1.65e-15 | 25 |
anatomical boundary | 1.65e-15 | 25 |
hepatobiliary system | 1.65e-15 | 25 |
foregut-midgut junction | 1.65e-15 | 25 |
septum transversum | 1.65e-15 | 25 |
sac | 6.48e-15 | 26 |
exocrine gland | 1.62e-12 | 31 |
exocrine system | 1.62e-12 | 31 |
endocrine gland | 4.35e-11 | 35 |
endocrine system | 1.28e-08 | 45 |
foregut | 3.56e-08 | 87 |
gut epithelium | 3.57e-07 | 54 |
abdomen element | 3.57e-07 | 54 |
abdominal segment element | 3.57e-07 | 54 |