FFCP PHASE1:Hg19::chr11:35252372..35252381,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:35252372..35252381,+
|short_description=p30@CD44
|description=CAGE_peak_30_at_CD44_5end
|association_with_transcript=306bp_to_AB073901_5end
|EntrezGene=9...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=960 | |EntrezGene=960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1681 | |HGNC=1681 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=306bp_to_AB073901_5end | |||
|cluster_id=chr11:35252372..35252381,+ | |||
|description=CAGE_peak_30_at_CD44_5end | |||
|id=chr11:35252372..35252381,+ | |||
|ontology_enrichment_celltype=CL:0000557!2.08e-19!71;CL:0002057!4.15e-19!42;CL:0002194!5.41e-19!63;CL:0000576!5.41e-19!63;CL:0000040!5.41e-19!63;CL:0000559!5.41e-19!63;CL:0002009!5.46e-19!65;CL:0000839!8.33e-19!70;CL:0000860!1.32e-17!45;CL:0000766!2.79e-17!76;CL:0000763!1.47e-10!112;CL:0000049!1.47e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.50e-40;33!CL:0002057;5.50e-40;33!CL:0000473;5.66e-31;39!CL:0000234;5.66e-31;39!CL:0000576;2.85e-17;48!CL:0000766;2.00e-13;69!CL:0000763;1.37e-08;100!CL:0000054;7.28e-07;2!CL:0000137;7.28e-07;2!CL:0000092;7.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.76e-33,42;CL:0002057,1.76e-33,42;CL:0000557,4.97e-33,67;CL:0002009,6.65e-32,61;CL:0000473,2.22e-31,48;CL:0000234,2.22e-31,48;CL:0000839,2.55e-31,66;CL:0002194,8.53e-31,59;CL:0000576,8.53e-31,59;CL:0000040,8.53e-31,59;CL:0000559,8.53e-31,59;CL:0000766,4.26e-28,72;CL:0000763,4.92e-19,108;CL:0000049,4.92e-19,108;CL:0002031,4.34e-15,120;CL:0002087,1.34e-13,115;CL:0000738,1.79e-13,136;CL:0000037,2.40e-10,168;CL:0002032,2.90e-10,161;CL:0000837,2.90e-10,161;CL:0000988,1.94e-09,177;CL:0000054,6.12e-07,2;CL:0000137,6.12e-07,2;CL:0000092,6.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.25e-25;42!CL:0000049;3.27e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.08e-07;2!DOID:200;7.28e-07;2!DOID:3350;7.28e-07;2!DOID:4305;7.28e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.16e-07,2;DOID:200,6.12e-07,2;DOID:4305,6.12e-07,2;DOID:3350,7.79e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.26e-16!80;UBERON:0002390!2.60e-14!102;UBERON:0003061!2.60e-14!102;UBERON:0001474!3.34e-14!86;UBERON:0004765!5.58e-14!101;UBERON:0001434!5.58e-14!101;UBERON:0002193!2.20e-12!112;UBERON:0002405!1.47e-09!115;UBERON:0002204!5.39e-09!167;UBERON:0000062!7.37e-08!511;UBERON:0000480!8.66e-08!626;UBERON:0000467!1.23e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.43e-30,76;UBERON:0001474,9.36e-28,82;UBERON:0002405,4.06e-27,93;UBERON:0002390,3.41e-25,98;UBERON:0003061,3.41e-25,98;UBERON:0004765,1.39e-24,90;UBERON:0002193,9.93e-24,108;UBERON:0001434,2.47e-21,100;UBERON:0002204,1.53e-13,167;UBERON:0003081,4.57e-13,203 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0.515151135268373,2.18097358169347,1.88937971844405,1.21292030593908,1.62700325833979,1.23350366406548,0,0.575384784644301,1.5369642391746,0.709446689665756,1.37898272294647,1.29096936716765,1.35426486594342,1.12945403725563,0.818718450173537,0.898893937780338,1.83650335422542,1.28371610830437,2.55734850319616,2.96866170168044,1.59570926097305,1.27867425159808,2.61188314765726,3.40431134814684,2.4912889959823,2.76373531782418,2.08593167368081,0.434377689410233,3.02699751316684,2.20966581592539,0.949387162322653,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0.803627933485401,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.384273959177026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,1.39303789839414,0.398873881556595,0,0,0,0,0.860234595106124,2.08284300964557,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.877955241761676,0,0.300476117813194,0.113432183160021,1.25572744982203,0,0,1.20036438433761,0.103052529238439,0.257640540045629,0,2.02531598689519,0.0974370051611986,0.504867548488229,0,0.484938170456436,1.42003837006646,0.302256294682921,0.169560592310488,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0.301586917234893,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0.445893486866185,0.93733833986777,0,0,0.626909658919938,0,0,0,0.264145302039678,1.65862492432618,0.144119953416961,1.00993946741104,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,5.70547620162874,0.289562613335158,0,0.179060963239896,0,0.197030760201927,0,0.256686072559497,0.508189248444927,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0.207970861530807,2.67643483195743,1.26161932027148,0.585707074963566,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.426910231213777,0,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0.116210378459959,0,0.200506470303285,0.184161977871793,0.229628896329213,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,1.34533047155574,0.765676274967505,0.708104465988849,0,0.94443704049192,0,0,0,0,0.18532421910392,0.858749320451947,0,0,0,0,1.71175595213568,0,0.78494864019923,0,0,0.235624804691373,0,1.58510321173008,0.421258456238981,0,0,1.05650146756755,0.545999645631943,0.282810863907425,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,0.687010689511529,0.307240764308458,0.447352215784832,0,0.19538809540204,0,0,0,1.33228787199128,0,0,0.439524537815682,0,0,0.568272293612826,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.996239941255349,0.828851746593443,0,1.32949287252801,0,0,0.269605053441981,0,0.511572370226872,0.887790650732402,0,3.33410970433911,0,0.0927680981618513,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.692552326534174,0.227884111694002,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0,0.337005664903385,0.802577647298789,0.234264445725339,0,0.19566461893209,0.242780379534093,0,0,0,0.252746318513952,0,0,1.99396161812156,0.992975867626496,1.2557316736289,0,0.569219092059585,0,0,0.685946781900644,0.174118413160805,0.698906672968121,1.71986032471617,0.19351266257817,0,0,0.678923115418936,0,0,0.411125773940253,1.9871461170299,0,0,0.561111741760736,0.213452994739353,0.19980960958213,0.864542502924636,0,0,0,0.372757606696298,0.707082103850386,0.815425236441684,0.836822770498666,0.815985741090574,0,0,0.958337652243951,0,1.71906176567983,0.262887354279314,0.837847203816763,2.52076466412852,2.15361907373044,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0,0,0,1.1248694577575,0,0,0,0.0788057072991982,0,0.422401346077626,0.179287339332845,0.191915197319445,0,0,0,0.542999601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| ||
|short_description=p30@CD44 | |||
}} | }} |
Latest revision as of 19:52, 17 September 2015
Short description: | p30@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_CD44_5end |
Coexpression cluster: | NA |
Association with transcript: | 306bp_to_AB073901_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.76e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.76e-33 | 42 |
granulocyte monocyte progenitor cell | 4.97e-33 | 67 |
macrophage dendritic cell progenitor | 6.65e-32 | 61 |
defensive cell | 2.22e-31 | 48 |
phagocyte | 2.22e-31 | 48 |
myeloid lineage restricted progenitor cell | 2.55e-31 | 66 |
monopoietic cell | 8.53e-31 | 59 |
monocyte | 8.53e-31 | 59 |
monoblast | 8.53e-31 | 59 |
promonocyte | 8.53e-31 | 59 |
myeloid leukocyte | 4.26e-28 | 72 |
myeloid cell | 4.92e-19 | 108 |
common myeloid progenitor | 4.92e-19 | 108 |
hematopoietic lineage restricted progenitor cell | 4.34e-15 | 120 |
nongranular leukocyte | 1.34e-13 | 115 |
leukocyte | 1.79e-13 | 136 |
hematopoietic stem cell | 2.40e-10 | 168 |
hematopoietic oligopotent progenitor cell | 2.90e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.90e-10 | 161 |
hematopoietic cell | 1.94e-09 | 177 |
bone matrix secreting cell | 6.12e-07 | 2 |
osteocyte | 6.12e-07 | 2 |
osteoclast | 6.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.43e-30 | 76 |
bone element | 9.36e-28 | 82 |
immune system | 4.06e-27 | 93 |
hematopoietic system | 3.41e-25 | 98 |
blood island | 3.41e-25 | 98 |
skeletal element | 1.39e-24 | 90 |
hemolymphoid system | 9.93e-24 | 108 |
skeletal system | 2.47e-21 | 100 |
musculoskeletal system | 1.53e-13 | 167 |
lateral plate mesoderm | 4.57e-13 | 203 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.16e-07 | 2 |
giant cell tumor | 6.12e-07 | 2 |
bone giant cell tumor | 6.12e-07 | 2 |
mesenchymal cell neoplasm | 7.79e-07 | 2 |