FFCP PHASE1:Hg19::chr12:21757744..21757758,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2998 | |EntrezGene=2998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4707 | |HGNC=4707 | ||
|TSSclassifier=strong | |||
|UniProt=P54840 | |UniProt=P54840 | ||
|association_with_transcript=22bp_to_ENST00000261195,NM_021957,uc001rfb.2_5end | |association_with_transcript=22bp_to_ENST00000261195,NM_021957,uc001rfb.2_5end | ||
|cluster_id=chr12:21757744..21757758,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_GYS2_5end | |description=CAGE_peak_2_at_GYS2_5end | ||
|id=chr12:21757744..21757758,- | |id=chr12:21757744..21757758,- | ||
|ontology_enrichment_celltype=CL:0000181!5.19e-07!12;CL:0000417!5.19e-07!12;CL:0000668!5.19e-07!12;CL:0000414!5.19e-07!12;CL:0000412!5.19e-07!12;CL:0000182!5.19e-07!12 | |ontology_enrichment_celltype=CL:0000181!5.19e-07!12;CL:0000417!5.19e-07!12;CL:0000668!5.19e-07!12;CL:0000414!5.19e-07!12;CL:0000412!5.19e-07!12;CL:0000182!5.19e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.12e-11;12!CL:0000136;2.71e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.12e-11,12;CL:0000136,5.60e-09,15 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.54e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!3.99e-12!3;UBERON:0001033!3.99e-12!3;UBERON:0010056!3.99e-12!3;UBERON:0005057!2.34e-11!26;UBERON:0002107!2.98e-11!19;UBERON:0006925!2.98e-11!19;UBERON:0008836!2.98e-11!19;UBERON:0008835!1.08e-09!22;UBERON:0003894!1.08e-09!22;UBERON:0002146!1.62e-09!1;UBERON:0005623!1.62e-09!1;UBERON:0002372!1.76e-09!1;UBERON:0001961!1.76e-09!1;UBERON:0001744!1.76e-09!1;UBERON:0001735!1.76e-09!1;UBERON:0009854!2.92e-09!23;UBERON:0001041!1.49e-08!98;UBERON:0007499!1.67e-08!25;UBERON:0009497!1.67e-08!25;UBERON:0000015!1.67e-08!25;UBERON:0002423!1.67e-08!25;UBERON:0006235!1.67e-08!25;UBERON:0004161!1.67e-08!25;UBERON:0002368!2.54e-08!35;UBERON:0009856!3.61e-08!26;UBERON:0001042!5.12e-08!10;UBERON:0009145!5.12e-08!10;UBERON:0006562!2.49e-07!11;UBERON:0000077!3.13e-07!130;UBERON:0004921!3.13e-07!129;UBERON:0004185!3.13e-07!129;UBERON:0002365!8.16e-07!31;UBERON:0002330!8.16e-07!31;UBERON:0005172!9.18e-07!55;UBERON:0005173!9.18e-07!55 | |ontology_enrichment_uberon=UBERON:0001723!3.99e-12!3;UBERON:0001033!3.99e-12!3;UBERON:0010056!3.99e-12!3;UBERON:0005057!2.34e-11!26;UBERON:0002107!2.98e-11!19;UBERON:0006925!2.98e-11!19;UBERON:0008836!2.98e-11!19;UBERON:0008835!1.08e-09!22;UBERON:0003894!1.08e-09!22;UBERON:0002146!1.62e-09!1;UBERON:0005623!1.62e-09!1;UBERON:0002372!1.76e-09!1;UBERON:0001961!1.76e-09!1;UBERON:0001744!1.76e-09!1;UBERON:0001735!1.76e-09!1;UBERON:0009854!2.92e-09!23;UBERON:0001041!1.49e-08!98;UBERON:0007499!1.67e-08!25;UBERON:0009497!1.67e-08!25;UBERON:0000015!1.67e-08!25;UBERON:0002423!1.67e-08!25;UBERON:0006235!1.67e-08!25;UBERON:0004161!1.67e-08!25;UBERON:0002368!2.54e-08!35;UBERON:0009856!3.61e-08!26;UBERON:0001042!5.12e-08!10;UBERON:0009145!5.12e-08!10;UBERON:0006562!2.49e-07!11;UBERON:0000077!3.13e-07!130;UBERON:0004921!3.13e-07!129;UBERON:0004185!3.13e-07!129;UBERON:0002365!8.16e-07!31;UBERON:0002330!8.16e-07!31;UBERON:0005172!9.18e-07!55;UBERON:0005173!9.18e-07!55 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.05e-19;19!UBERON:0006925;6.05e-19;19!UBERON:0002423;2.07e-14;25!UBERON:0002365;1.32e-11;31!UBERON:0002330;1.32e-11;31!UBERON:0002368;4.52e-10;33!UBERON:0000949;2.09e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.05e-19,19;UBERON:0006925,6.05e-19,19;UBERON:0008836,6.05e-19,19;UBERON:0008835,2.27e-16,22;UBERON:0003894,2.27e-16,22;UBERON:0009854,1.16e-15,23;UBERON:0007499,2.07e-14,25;UBERON:0009497,2.07e-14,25;UBERON:0000015,2.07e-14,25;UBERON:0002423,2.07e-14,25;UBERON:0006235,2.07e-14,25;UBERON:0004161,2.07e-14,25;UBERON:0009856,7.41e-14,26;UBERON:0002365,1.27e-11,31;UBERON:0002330,1.27e-11,31;UBERON:0002368,2.72e-10,35;UBERON:0000949,5.43e-08,45;UBERON:0001041,1.48e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.2238594018943,3.9313088667105,14.7697476670351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.9309029485779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1741996819708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07730361905316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42472541221049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.1811776635412,11.9256200020999,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0,1.53172788381731,1.63936315354902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653150243690884,1.71116650542641,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.2238594018943,3.9313088667105,14.7697476670351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.9309029485779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1741996819708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07730361905316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42472541221049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.1811776635412,11.9256200020999,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0,1.53172788381731,1.63936315354902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653150243690884,1.71116650542641,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p2@GYS2 | |short_description=p2@GYS2 | ||
}} | }} |
Latest revision as of 19:52, 17 September 2015
Short description: | p2@GYS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GYS2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 22bp_to_ENST00000261195, NM_021957, uc001rfb.2_5end |
EntrezGene: | GYS2 |
HGNC: | 4707 |
UniProt: | P54840 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.12e-11 | 12 |
fat cell | 5.60e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
liver | 6.05e-19 | 19 |
digestive gland | 6.05e-19 | 19 |
liver bud | 6.05e-19 | 19 |
hepatic diverticulum | 2.27e-16 | 22 |
liver primordium | 2.27e-16 | 22 |
digestive tract diverticulum | 1.16e-15 | 23 |
epithelial sac | 2.07e-14 | 25 |
epithelium of foregut-midgut junction | 2.07e-14 | 25 |
anatomical boundary | 2.07e-14 | 25 |
hepatobiliary system | 2.07e-14 | 25 |
foregut-midgut junction | 2.07e-14 | 25 |
septum transversum | 2.07e-14 | 25 |
sac | 7.41e-14 | 26 |
exocrine gland | 1.27e-11 | 31 |
exocrine system | 1.27e-11 | 31 |
endocrine gland | 2.72e-10 | 35 |
endocrine system | 5.43e-08 | 45 |
foregut | 1.48e-07 | 87 |