FFCP PHASE1:Hg19::chr7:22768316..22768365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3569 | |EntrezGene=3569 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6018 | |HGNC=6018 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=197bp_to_ENST00000464710_5end | |association_with_transcript=197bp_to_ENST00000464710_5end | ||
|cluster_id=chr7:22768316..22768365,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_5_at_IL6_5end | |description=CAGE_peak_5_at_IL6_5end | ||
|id=chr7:22768316..22768365,+ | |id=chr7:22768316..22768365,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.56e-12!32;CL:0000048!4.07e-12!430;CL:0000723!1.65e-11!436;CL:0000034!3.04e-11!444;CL:0000192!7.49e-09!42;CL:0000514!7.49e-09!42;CL:0000144!8.13e-09!625;CL:0000055!2.56e-08!180;CL:0000012!3.21e-08!682;CL:0000548!6.19e-08!679;CL:0000004!6.19e-08!679;CL:0000255!6.19e-08!679;CL:0002371!1.38e-07!591;CL:0000003!6.16e-07!722;CL:0000680!9.14e-07!57;CL:0000056!9.14e-07!57;CL:0000355!9.14e-07!57 | |ontology_enrichment_celltype=CL:0000359!1.56e-12!32;CL:0000048!4.07e-12!430;CL:0000723!1.65e-11!436;CL:0000034!3.04e-11!444;CL:0000192!7.49e-09!42;CL:0000514!7.49e-09!42;CL:0000144!8.13e-09!625;CL:0000055!2.56e-08!180;CL:0000012!3.21e-08!682;CL:0000548!6.19e-08!679;CL:0000004!6.19e-08!679;CL:0000255!6.19e-08!679;CL:0002371!1.38e-07!591;CL:0000003!6.16e-07!722;CL:0000680!9.14e-07!57;CL:0000056!9.14e-07!57;CL:0000355!9.14e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.52e-11;32!CL:0002595;1.94e-11;5!CL:0000860;2.39e-11;33!CL:0002057;2.39e-11;33!CL:0000569;2.79e-08;4!CL:0002593;4.58e-08;2!CL:0000473;4.95e-08;39!CL:0000234;4.95e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.00e-12,32;CL:0000048,9.35e-12,427;CL:0000034,1.05e-11,441;CL:0002595,1.90e-11,5;CL:0000723,2.03e-11,433;CL:0000860,2.51e-09,42;CL:0002057,2.51e-09,42;CL:0000192,2.34e-08,43;CL:0000514,2.34e-08,43;CL:0000569,2.53e-08,4;CL:0000011,2.53e-08,4;CL:0002593,4.67e-08,2;CL:0000473,7.91e-08,48;CL:0000234,7.91e-08,48;CL:0000134,2.52e-07,354;CL:0002320,5.39e-07,361;CL:0002194,8.92e-07,59;CL:0000576,8.92e-07,59;CL:0000040,8.92e-07,59;CL:0000559,8.92e-07,59;CL:0002494,9.54e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000011;2.79e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!1.04e-13!14;DOID:193!7.23e-11!29;DOID:120!1.23e-10!27 | |ontology_enrichment_disease=DOID:2394!1.04e-13!14;DOID:193!7.23e-11!29;DOID:120!1.23e-10!27 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.43e-21;14!DOID:120;5.26e-10;27!DOID:193;3.52e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.13e-21,14;DOID:120,6.37e-10,27;DOID:193,4.20e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0001637!2.74e-11!42;UBERON:0003509!2.74e-11!42;UBERON:0004572!2.74e-11!42;UBERON:0004573!8.56e-10!33;UBERON:0004571!8.56e-10!33;UBERON:0004872!2.07e-09!84;UBERON:0000992!1.09e-08!13;UBERON:0000055!4.85e-08!69;UBERON:0001981!5.13e-08!60;UBERON:0007500!5.13e-08!60;UBERON:0004537!5.13e-08!60;UBERON:0006965!5.13e-08!60;UBERON:0003914!1.96e-07!118;UBERON:0000991!2.25e-07!21;UBERON:0009196!2.25e-07!21;UBERON:0009117!2.25e-07!21;UBERON:0005564!2.25e-07!21;UBERON:0002118!4.72e-07!5;UBERON:0004532!4.72e-07!5;UBERON:0004176!7.00e-07!22 | |ontology_enrichment_uberon=UBERON:0001637!2.74e-11!42;UBERON:0003509!2.74e-11!42;UBERON:0004572!2.74e-11!42;UBERON:0004573!8.56e-10!33;UBERON:0004571!8.56e-10!33;UBERON:0004872!2.07e-09!84;UBERON:0000992!1.09e-08!13;UBERON:0000055!4.85e-08!69;UBERON:0001981!5.13e-08!60;UBERON:0007500!5.13e-08!60;UBERON:0004537!5.13e-08!60;UBERON:0006965!5.13e-08!60;UBERON:0003914!1.96e-07!118;UBERON:0000991!2.25e-07!21;UBERON:0009196!2.25e-07!21;UBERON:0009117!2.25e-07!21;UBERON:0005564!2.25e-07!21;UBERON:0002118!4.72e-07!5;UBERON:0004532!4.72e-07!5;UBERON:0004176!7.00e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;9.70e-15;13!UBERON:0002119;4.14e-13;4!UBERON:0003834;1.94e-11;5!UBERON:0001533;1.94e-11;5!UBERON:0000991;5.83e-11;21!UBERON:0002118;9.15e-11;5!UBERON:0004573;1.37e-10;33!UBERON:0004571;1.37e-10;33!UBERON:0001637;8.50e-09;42!UBERON:0003509;8.50e-09;42!UBERON:0004572;8.50e-09;42!UBERON:0003513;3.68e-08;7!UBERON:0002456;4.58e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.20e-14,13;UBERON:0002119,3.50e-13,4;UBERON:0001637,6.58e-12,42;UBERON:0003509,6.58e-12,42;UBERON:0004572,6.58e-12,42;UBERON:0004573,1.28e-11,33;UBERON:0004571,1.28e-11,33;UBERON:0003834,1.90e-11,5;UBERON:0001533,1.90e-11,5;UBERON:0000991,6.82e-11,21;UBERON:0009196,6.82e-11,21;UBERON:0009117,6.82e-11,21;UBERON:0005564,6.82e-11,21;UBERON:0002118,1.40e-10,5;UBERON:0004176,2.55e-10,22;UBERON:0000926,9.96e-10,315;UBERON:0004120,9.96e-10,315;UBERON:0006603,9.96e-10,315;UBERON:0004872,1.68e-09,83;UBERON:0003081,1.77e-09,203;UBERON:0002204,2.13e-08,167;UBERON:0003513,3.62e-08,7;UBERON:0002456,4.67e-08,2;UBERON:0003914,5.58e-08,117;UBERON:0007500,1.40e-07,59;UBERON:0001981,1.40e-07,59;UBERON:0004537,1.40e-07,59;UBERON:0006965,1.40e-07,59;UBERON:0002384,3.87e-07,371 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0.232429036905685,0,0.929119112685311,0,0,0.47296445977717,5.17118521104928,1.93645405075148,1.35426486594342,0,0,0,13.7737751566906,1.92557416245656,5.11469700639233,0,0,0,68.1991710777172,64.6819156147899,66.0191583935309,0,0,0,37.5347691632689,13.2579948955523,25.6334533827116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0.382273228125229,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.579386075843295,0.795285947051099,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,1.39293562831038,1.45650098894541,0.286836620748814,0,1.68203280042692,0,0.98667019366864,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0.245668634623536,0,1.18800285728205,3.21447008062124,0,0,0,0,0,0,0,1.05166641234618,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.276149695926898,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,9.38697193978896,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0.144366447761074,0.925971025153221,0.761016608938393,0,0,0,0,0.148631162288728,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0.315404830067869,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,0,0,0,1.48864684691266,0.153461973288062,2.24528075546459,0.512556597022804,0,1.28683136914886,0,0.154209693802656,0.710246901252508,0.0821271560138091,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,2.49322802678617,0,0,0,0,0,0,0,0,0,0.574265537996172,0,3.21367859688319,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0,0,0.31481234683064,0,1.23213432070436,0,0,0.74129687641568,6.29749501664761,0,0,0.190630193923825,0,0.855877976067841,0.95460974377781,3.92474320099615,0,0,0,1.01091240786658,0,1.68503382495592,0,7.31140468893853,4.22600587027022,0,0.141405431953713,0,0,3.3171948762061,4.38450885253763,0,0,0.202910376962704,1.54911749049875,0.281695602532241,0,0.0982490410131212,1.78335525740625,0,1.26664581178598,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,1.93701494939902,0.46112780877612,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.421996129056054,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0.171986032471617,0,0.0730893170861856,0,0,0,0,0.274083849293502,1.19228767021794,0,0,0.480952921509202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0.525774708558629,0.558564802544508,0,0,0,0,0,0,5.04419836959365,1.16495949527454,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,3.04788476865836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,1.0027595760908,0.919036730290385,1.31149052283922,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0.705797459094515,0,0,0.149254802886874,0.701139929541673,0,1.51522404220071,0,0,2.51724075236616,0.604923695052956,2.64243240990727,11.9762671491603,1.43367090447332,16.1929120378898,1.39736661188633,1.24411862352257,0.265841714557995,0,2.55437935295271,1.14241563650639,0.406870733204662,2.36403256963327,1.07410557042488,2.32016879939247,3.18476710958893,0,0,0,0,0,0,0,0,0,0.489473409012935,0,0,0,0.176689145945881,0,0,0,0,0.911579868532147,0,0,0.132864840313363,0,0.655219697692825,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0.577628330751691,0,0,0,0,0.40341013740704,0,0.261906694481422,1.80149109261106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,1.07963795609311,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0.62041277132864,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645499848534087,0,0,0.533636729388577,0,0,0,0,0,0,0,0 | 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| ||
|short_description=p5@IL6 | |short_description=p5@IL6 | ||
}} | }} |
Latest revision as of 19:40, 17 September 2015
Short description: | p5@IL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IL6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 197bp_to_ENST00000464710_5end |
EntrezGene: | IL6 |
HGNC: | 6018 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.00e-12 | 32 |
multi fate stem cell | 9.35e-12 | 427 |
stem cell | 1.05e-11 | 441 |
smooth muscle cell of the subclavian artery | 1.90e-11 | 5 |
somatic stem cell | 2.03e-11 | 433 |
classical monocyte | 2.51e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.51e-09 | 42 |
smooth muscle cell | 2.34e-08 | 43 |
smooth muscle myoblast | 2.34e-08 | 43 |
cardiac mesenchymal cell | 2.53e-08 | 4 |
migratory trunk neural crest cell | 2.53e-08 | 4 |
smooth muscle cell of the internal thoracic artery | 4.67e-08 | 2 |
defensive cell | 7.91e-08 | 48 |
phagocyte | 7.91e-08 | 48 |
mesenchymal cell | 2.52e-07 | 354 |
connective tissue cell | 5.39e-07 | 361 |
monopoietic cell | 8.92e-07 | 59 |
monocyte | 8.92e-07 | 59 |
monoblast | 8.92e-07 | 59 |
promonocyte | 8.92e-07 | 59 |
cardiocyte | 9.54e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.20e-14 | 13 |
left ovary | 3.50e-13 | 4 |
artery | 6.58e-12 | 42 |
arterial blood vessel | 6.58e-12 | 42 |
arterial system | 6.58e-12 | 42 |
systemic artery | 1.28e-11 | 33 |
systemic arterial system | 1.28e-11 | 33 |
thoracic segment blood vessel | 1.90e-11 | 5 |
subclavian artery | 1.90e-11 | 5 |
gonad | 6.82e-11 | 21 |
indifferent external genitalia | 6.82e-11 | 21 |
indifferent gonad | 6.82e-11 | 21 |
gonad primordium | 6.82e-11 | 21 |
right ovary | 1.40e-10 | 5 |
external genitalia | 2.55e-10 | 22 |
mesoderm | 9.96e-10 | 315 |
mesoderm-derived structure | 9.96e-10 | 315 |
presumptive mesoderm | 9.96e-10 | 315 |
splanchnic layer of lateral plate mesoderm | 1.68e-09 | 83 |
lateral plate mesoderm | 1.77e-09 | 203 |
musculoskeletal system | 2.13e-08 | 167 |
trunk blood vessel | 3.62e-08 | 7 |
internal thoracic artery | 4.67e-08 | 2 |
epithelial tube | 5.58e-08 | 117 |
epithelial tube open at both ends | 1.40e-07 | 59 |
blood vessel | 1.40e-07 | 59 |
blood vasculature | 1.40e-07 | 59 |
vascular cord | 1.40e-07 | 59 |
connective tissue | 3.87e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.13e-21 | 14 |
female reproductive organ cancer | 6.37e-10 | 27 |
reproductive organ cancer | 4.20e-09 | 29 |