FFCP PHASE1:Hg19::chr7:22768298..22768315,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3569 | |EntrezGene=3569 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6018 | |HGNC=6018 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=179bp_to_ENST00000464710_5end | |association_with_transcript=179bp_to_ENST00000464710_5end | ||
|cluster_id=chr7:22768298..22768315,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_7_at_IL6_5end | |description=CAGE_peak_7_at_IL6_5end | ||
|id=chr7:22768298..22768315,+ | |id=chr7:22768298..22768315,+ | ||
|ontology_enrichment_celltype=CL:0000569!1.55e-07!4;CL:0000011!1.55e-07!4;CL:0000548!1.88e-07!679;CL:0000004!1.88e-07!679;CL:0000255!1.88e-07!679;CL:0000012!2.85e-07!682 | |ontology_enrichment_celltype=CL:0000569!1.55e-07!4;CL:0000011!1.55e-07!4;CL:0000548!1.88e-07!679;CL:0000004!1.88e-07!679;CL:0000255!1.88e-07!679;CL:0000012!2.85e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000569;7.64e-18;4!CL:0000860;1.72e-16;33!CL:0002057;1.72e-16;33!CL:0000473;2.32e-11;39!CL:0000234;2.32e-11;39!CL:0002591;7.26e-09;1!CL:0000576;7.87e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,5.89e-18,4;CL:0000011,5.89e-18,4;CL:0000860,6.09e-14,42;CL:0002057,6.09e-14,42;CL:0000473,5.01e-12,48;CL:0000234,5.01e-12,48;CL:0002194,2.41e-09,59;CL:0000576,2.41e-09,59;CL:0000040,2.41e-09,59;CL:0000559,2.41e-09,59;CL:0002009,5.35e-09,61;CL:0002591,9.91e-09,1;CL:0000839,3.18e-08,66;CL:0000557,4.40e-08,67;CL:0000766,1.96e-07,72;CL:0000048,3.23e-07,427;CL:0000723,4.66e-07,433;CL:0000034,7.51e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000011;7.64e-18;4!CL:0002057;1.77e-09;42 | |||
|ontology_enrichment_disease=DOID:2394!3.62e-12!14;DOID:193!1.25e-08!29;DOID:120!3.06e-08!27 | |||
|ontology_enrichment_disease_v019=DOID:3112;7.26e-09;1!DOID:3571;7.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,9.17e-09,1;DOID:3571,1.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!3.49e-07!42;UBERON:0003509!3.49e-07!42;UBERON:0004572!3.49e-07!42;UBERON:0000992!5.70e-07!13 | |ontology_enrichment_uberon=UBERON:0001637!3.49e-07!42;UBERON:0003509!3.49e-07!42;UBERON:0004572!3.49e-07!42;UBERON:0000992!5.70e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;7.26e-09;1!UBERON:0009842;7.26e-09;1!UBERON:0003704;7.26e-09;1!UBERON:0001171;7.26e-09;1!UBERON:0001172;7.26e-09;1!UBERON:0002118;6.18e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,5.31e-09,1;UBERON:0009842,5.31e-09,1;UBERON:0003704,5.31e-09,1;UBERON:0001171,5.31e-09,1;UBERON:0001172,5.31e-09,1;UBERON:0002118,5.00e-07,5;UBERON:0002371,5.61e-07,76;UBERON:0003081,7.93e-07,203 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,3.44745680736619,0.645484683583826,0,0,0,0,5.20342617030534,0.641858054152187,1.27867425159808,0,0,0,22.0559021357724,10.2129340444405,14.3249117268982,0,0,0,7.87019353423379,2.57794345191295,4.43047342417238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,1.45990461090791,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.379891534993739,0.794455084879313,0.860509862246441,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0,0.751190294532984,0.226864366320042,0,0.213557388818567,0,0,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0.276149695926898,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0,0,2.0694614258501,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0.496215615637554,0,0.561320188866147,0.768834895534206,0.511707249066704,0.482561763430822,0,0.154209693802656,1.06537035187876,0.164254312027618,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0.464845549297286,1.5740617341532,0,0.616067160352178,0,0,0,2.00374841438788,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,3.1682753652067,0,0,0,1.13008116620243,0,0,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0,0,0,0.35667105148125,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.359473404589307,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,1.59518878185802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,0,0,0.34823682632161,0,0,0,0,0,0,0,0,0,0.794858446811959,0,0,0.64127056201227,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.105600336519406,0.896436696664224,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.895528817321244,0.467426619694449,0,0.568209015825267,0,0,1.83072054717539,0.756154618816195,1.39893480524502,4.28779934969938,0.796483835818512,2.24901556081802,0.310525913752519,0.414706207840855,0.53168342911599,0,0.601030435988874,0.761610424337591,0,1.45478927362048,0.859284456339908,0.928067519756987,1.99047944349308,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0.20170506870352,0,0,1.14640342257068,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0.143444410785353,0,0,0.533636729388577,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,3.44745680736619,0.645484683583826,0,0,0,0,5.20342617030534,0.641858054152187,1.27867425159808,0,0,0,22.0559021357724,10.2129340444405,14.3249117268982,0,0,0,7.87019353423379,2.57794345191295,4.43047342417238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,1.45990461090791,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.379891534993739,0.794455084879313,0.860509862246441,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0,0.751190294532984,0.226864366320042,0,0.213557388818567,0,0,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0.276149695926898,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0,0,2.0694614258501,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0.496215615637554,0,0.561320188866147,0.768834895534206,0.511707249066704,0.482561763430822,0,0.154209693802656,1.06537035187876,0.164254312027618,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0.464845549297286,1.5740617341532,0,0.616067160352178,0,0,0,2.00374841438788,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,3.1682753652067,0,0,0,1.13008116620243,0,0,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0,0,0,0.35667105148125,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.359473404589307,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,1.59518878185802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,0,0,0.34823682632161,0,0,0,0,0,0,0,0,0,0.794858446811959,0,0,0.64127056201227,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.105600336519406,0.896436696664224,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.895528817321244,0.467426619694449,0,0.568209015825267,0,0,1.83072054717539,0.756154618816195,1.39893480524502,4.28779934969938,0.796483835818512,2.24901556081802,0.310525913752519,0.414706207840855,0.53168342911599,0,0.601030435988874,0.761610424337591,0,1.45478927362048,0.859284456339908,0.928067519756987,1.99047944349308,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0.20170506870352,0,0,1.14640342257068,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0.143444410785353,0,0,0.533636729388577,0,0,0,0,0,0,0,0 | ||
|short_description=p7@IL6 | |short_description=p7@IL6 | ||
}} | }} |
Latest revision as of 19:39, 17 September 2015
Short description: | p7@IL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IL6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 179bp_to_ENST00000464710_5end |
EntrezGene: | IL6 |
HGNC: | 6018 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 5.89e-18 | 4 |
migratory trunk neural crest cell | 5.89e-18 | 4 |
classical monocyte | 6.09e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.09e-14 | 42 |
defensive cell | 5.01e-12 | 48 |
phagocyte | 5.01e-12 | 48 |
monopoietic cell | 2.41e-09 | 59 |
monocyte | 2.41e-09 | 59 |
monoblast | 2.41e-09 | 59 |
promonocyte | 2.41e-09 | 59 |
macrophage dendritic cell progenitor | 5.35e-09 | 61 |
smooth muscle cell of the pulmonary artery | 9.91e-09 | 1 |
myeloid lineage restricted progenitor cell | 3.18e-08 | 66 |
granulocyte monocyte progenitor cell | 4.40e-08 | 67 |
myeloid leukocyte | 1.96e-07 | 72 |
multi fate stem cell | 3.23e-07 | 427 |
somatic stem cell | 4.66e-07 | 433 |
stem cell | 7.51e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 5.31e-09 | 1 |
acinus | 5.31e-09 | 1 |
intrahepatic bile duct | 5.31e-09 | 1 |
portal lobule | 5.31e-09 | 1 |
hepatic acinus | 5.31e-09 | 1 |
right ovary | 5.00e-07 | 5 |
bone marrow | 5.61e-07 | 76 |
lateral plate mesoderm | 7.93e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 9.17e-09 | 1 |
liver cancer | 1.07e-08 | 1 |