FFCP PHASE1:Hg19::chr4:41362846..41362859,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22998 | |EntrezGene=22998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29191 | |HGNC=29191 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENST00000512820_5end | |association_with_transcript=14bp_to_ENST00000512820_5end | ||
|cluster_id=chr4:41362846..41362859,+ | |||
|coexpression_cluster_id=C4413 | |||
|description=CAGE_peak_5_at_LIMCH1_5end | |description=CAGE_peak_5_at_LIMCH1_5end | ||
|id=chr4:41362846..41362859,+ | |id=chr4:41362846..41362859,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.55e-10;82!UBERON:0008947;2.53e-09;29!UBERON:0002532;9.74e-07;206!UBERON:0010316;9.74e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.52e-37!115;UBERON:0001049!1.13e-28!57;UBERON:0005068!1.13e-28!57;UBERON:0006241!1.13e-28!57;UBERON:0007135!1.13e-28!57;UBERON:0005743!1.53e-28!86;UBERON:0000073!2.00e-28!94;UBERON:0001016!2.00e-28!94;UBERON:0001017!6.98e-27!82;UBERON:0000955!1.01e-24!69;UBERON:0006238!1.01e-24!69;UBERON:0003080!1.45e-24!42;UBERON:0002780!2.86e-24!41;UBERON:0001890!2.86e-24!41;UBERON:0006240!2.86e-24!41;UBERON:0002616!6.52e-23!59;UBERON:0003075!9.07e-22!86;UBERON:0007284!9.07e-22!86;UBERON:0001893!1.36e-21!34;UBERON:0002020!1.41e-21!34;UBERON:0003528!1.41e-21!34;UBERON:0002346!2.27e-21!90;UBERON:0002791!7.77e-21!33;UBERON:0000477!8.39e-21!286;UBERON:0004111!5.17e-20!241;UBERON:0001869!5.26e-20!32;UBERON:0000025!2.16e-19!194;UBERON:0003056!7.52e-17!61;UBERON:0000956!3.08e-15!25;UBERON:0000203!3.08e-15!25;UBERON:0000475!9.21e-15!365;UBERON:0002619!2.21e-14!22;UBERON:0000924!2.12e-13!173;UBERON:0006601!2.12e-13!173;UBERON:0004121!2.24e-13!169;UBERON:0001950!5.57e-13!20;UBERON:0000153!1.21e-12!129;UBERON:0007811!1.21e-12!129;UBERON:0000033!2.18e-12!123;UBERON:0000483!5.04e-12!309;UBERON:0000481!7.62e-12!347;UBERON:0000119!1.98e-11!312;UBERON:0000064!2.76e-10!219;UBERON:0000468!3.21e-10!659;UBERON:0000467!1.04e-08!625;UBERON:0000062!1.42e-08!511;UBERON:0000480!1.46e-08!626;UBERON:0002308!7.02e-08!9;UBERON:0000125!7.02e-08!9;UBERON:0002420!1.04e-07!9;UBERON:0007245!1.04e-07!9;UBERON:0010009!1.04e-07!9;UBERON:0010011!1.04e-07!9;UBERON:0000454!1.04e-07!9;UBERON:0002298!4.64e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!4.52e-37!115;UBERON:0001049!1.13e-28!57;UBERON:0005068!1.13e-28!57;UBERON:0006241!1.13e-28!57;UBERON:0007135!1.13e-28!57;UBERON:0005743!1.53e-28!86;UBERON:0000073!2.00e-28!94;UBERON:0001016!2.00e-28!94;UBERON:0001017!6.98e-27!82;UBERON:0000955!1.01e-24!69;UBERON:0006238!1.01e-24!69;UBERON:0003080!1.45e-24!42;UBERON:0002780!2.86e-24!41;UBERON:0001890!2.86e-24!41;UBERON:0006240!2.86e-24!41;UBERON:0002616!6.52e-23!59;UBERON:0003075!9.07e-22!86;UBERON:0007284!9.07e-22!86;UBERON:0001893!1.36e-21!34;UBERON:0002020!1.41e-21!34;UBERON:0003528!1.41e-21!34;UBERON:0002346!2.27e-21!90;UBERON:0002791!7.77e-21!33;UBERON:0000477!8.39e-21!286;UBERON:0004111!5.17e-20!241;UBERON:0001869!5.26e-20!32;UBERON:0000025!2.16e-19!194;UBERON:0003056!7.52e-17!61;UBERON:0000956!3.08e-15!25;UBERON:0000203!3.08e-15!25;UBERON:0000475!9.21e-15!365;UBERON:0002619!2.21e-14!22;UBERON:0000924!2.12e-13!173;UBERON:0006601!2.12e-13!173;UBERON:0004121!2.24e-13!169;UBERON:0001950!5.57e-13!20;UBERON:0000153!1.21e-12!129;UBERON:0007811!1.21e-12!129;UBERON:0000033!2.18e-12!123;UBERON:0000483!5.04e-12!309;UBERON:0000481!7.62e-12!347;UBERON:0000119!1.98e-11!312;UBERON:0000064!2.76e-10!219;UBERON:0000468!3.21e-10!659;UBERON:0000467!1.04e-08!625;UBERON:0000062!1.42e-08!511;UBERON:0000480!1.46e-08!626;UBERON:0002308!7.02e-08!9;UBERON:0000125!7.02e-08!9;UBERON:0002420!1.04e-07!9;UBERON:0007245!1.04e-07!9;UBERON:0010009!1.04e-07!9;UBERON:0010011!1.04e-07!9;UBERON:0000454!1.04e-07!9;UBERON:0002298!4.64e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.39e-23;34!UBERON:0003528;1.66e-23;34!UBERON:0002020;1.66e-23;34!UBERON:0002791;9.52e-23;32!UBERON:0001869;9.67e-23;32!UBERON:0002780;5.17e-21;41!UBERON:0001890;5.17e-21;41!UBERON:0000073;3.84e-19;53!UBERON:0002616;3.84e-19;53!UBERON:0002619;5.19e-19;22!UBERON:0000956;5.26e-19;25!UBERON:0000203;5.26e-19;25!UBERON:0001950;4.11e-17;20!UBERON:0000955;2.77e-13;68!UBERON:0001017;2.84e-12;75!UBERON:0007023;4.89e-11;114!UBERON:0001016;1.05e-10;83!UBERON:0000125;3.99e-10;9!UBERON:0002308;3.99e-10;9!UBERON:0002420;7.08e-10;9!UBERON:0007245;7.08e-10;9!UBERON:0010009;7.08e-10;9!UBERON:0010011;7.08e-10;9!UBERON:0000454;7.08e-10;9!UBERON:0009663;4.48e-08;7!UBERON:0002298;1.30e-07;6!UBERON:0000200;3.35e-07;6 | |||
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| ||
|short_description=p5@LIMCH1 | |short_description=p5@LIMCH1 | ||
}} | }} |
Latest revision as of 19:37, 17 September 2015
Short description: | p5@LIMCH1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LIMCH1_5end |
Coexpression cluster: | C4413_Preadipocyte_optic_globus_thalamus_somatostatinoma_spinal_substantia |
Association with transcript: | 14bp_to_ENST00000512820_5end |
EntrezGene: | LIMCH1 |
HGNC: | 29191 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data