FFCP PHASE1:Hg19::chr9:74764397..74764408,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9615 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4212 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=6bp_to_ENST00000475764_5end | |||
|cluster_id=chr9:74764397..74764408,+ | |||
|coexpression_cluster_id=C2946 | |||
|description=CAGE_peak_3_at_GDA_5end | |||
|id=chr9:74764397..74764408,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.36e-07;29 | |||
|ontology_enrichment_disease=DOID:305!9.61e-13!106;DOID:0050687!2.15e-08!143;DOID:299!8.26e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;8.08e-13;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.92e-19,106;DOID:299,8.57e-13,25;DOID:0050687,1.36e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0001869!8.81e-23!32;UBERON:0002619!1.75e-22!22;UBERON:0001893!3.22e-22!34;UBERON:0002791!3.39e-21!33;UBERON:0001950!1.57e-20!20;UBERON:0002020!2.14e-20!34;UBERON:0003528!2.14e-20!34;UBERON:0002780!4.30e-19!41;UBERON:0001890!4.30e-19!41;UBERON:0006240!4.30e-19!41;UBERON:0000956!8.22e-19!25;UBERON:0000203!8.22e-19!25;UBERON:0003080!2.29e-18!42;UBERON:0007023!3.46e-17!115;UBERON:0001049!2.78e-13!57;UBERON:0005068!2.78e-13!57;UBERON:0006241!2.78e-13!57;UBERON:0007135!2.78e-13!57;UBERON:0001007!3.83e-12!155;UBERON:0001555!3.83e-12!155;UBERON:0007026!3.83e-12!155;UBERON:0002616!1.16e-11!59;UBERON:0000955!2.09e-11!69;UBERON:0006238!2.09e-11!69;UBERON:0004921!2.78e-11!129;UBERON:0004185!2.78e-11!129;UBERON:0004119!4.31e-11!169;UBERON:0000925!4.31e-11!169;UBERON:0006595!4.31e-11!169;UBERON:0001017!4.81e-11!82;UBERON:0003056!1.03e-10!61;UBERON:0005743!1.80e-10!86;UBERON:0000062!2.09e-10!511;UBERON:0001737!9.82e-10!9;UBERON:0002108!1.54e-09!14;UBERON:0000073!2.23e-09!94;UBERON:0001016!2.23e-09!94;UBERON:0000160!3.80e-09!27;UBERON:0001871!1.09e-08!7;UBERON:0001557!1.81e-08!19;UBERON:0000077!1.92e-08!130;UBERON:0000064!2.96e-08!219;UBERON:0002346!3.79e-08!90;UBERON:0001041!6.60e-08!98;UBERON:0002114!9.30e-08!12;UBERON:0000481!9.35e-08!347;UBERON:0005409!9.46e-08!35;UBERON:0000153!1.38e-07!129;UBERON:0007811!1.38e-07!129;UBERON:0000200!1.73e-07!6;UBERON:0003075!2.27e-07!86;UBERON:0007284!2.27e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.43e-38;22!UBERON:0001950;4.00e-34;20!UBERON:0001869;1.04e-33;32!UBERON:0000956;1.20e-32;25!UBERON:0000203;1.20e-32;25!UBERON:0002791;3.17e-31;32!UBERON:0001893;1.17e-29;34!UBERON:0003528;7.86e-29;34!UBERON:0002020;7.86e-29;34!UBERON:0002780;3.23e-20;41!UBERON:0001890;3.23e-20;41!UBERON:0001737;7.97e-17;9!UBERON:0001557;7.97e-17;9!UBERON:0000200;1.29e-12;6!UBERON:0000073;2.52e-11;53!UBERON:0002616;2.52e-11;53!UBERON:0000349;7.24e-11;5!UBERON:0001871;2.17e-10;6!UBERON:0001872;4.87e-10;5!UBERON:0002075;5.53e-10;18!UBERON:0002108;6.16e-10;4!UBERON:0002021;2.49e-09;5!UBERON:0005409;2.57e-08;22!UBERON:0000955;3.16e-08;68!UBERON:0001264;9.35e-08;10!UBERON:0001017;9.85e-08;75!UBERON:0002420;1.20e-07;9!UBERON:0007245;1.20e-07;9!UBERON:0010009;1.20e-07;9!UBERON:0010011;1.20e-07;9!UBERON:0000454;1.20e-07;9!UBERON:0000160;1.91e-07;17!UBERON:0001870;2.09e-07;3!UBERON:0002294;6.27e-07;7!UBERON:0001173;6.27e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.62e-38,32;UBERON:0002619,7.96e-38,22;UBERON:0001893,1.68e-35,34;UBERON:0002791,6.64e-35,32;UBERON:0001950,3.60e-34,20;UBERON:0000956,1.14e-32,25;UBERON:0000203,1.14e-32,25;UBERON:0003528,1.90e-32,34;UBERON:0002020,1.90e-32,34;UBERON:0002780,3.46e-28,41;UBERON:0001890,3.46e-28,41;UBERON:0003080,3.46e-28,41;UBERON:0006240,3.46e-28,41;UBERON:0000073,4.07e-20,53;UBERON:0002616,4.07e-20,53;UBERON:0011216,8.17e-19,223;UBERON:0001049,1.21e-18,56;UBERON:0005068,1.21e-18,56;UBERON:0006241,1.21e-18,56;UBERON:0007135,1.21e-18,56;UBERON:0001737,7.84e-17,9;UBERON:0003056,1.65e-16,61;UBERON:0000955,1.68e-16,68;UBERON:0006238,1.68e-16,68;UBERON:0001017,6.12e-15,81;UBERON:0001016,1.21e-12,89;UBERON:0000200,1.22e-12,6;UBERON:0007023,1.81e-11,114;UBERON:0000349,7.56e-11,5;UBERON:0003075,1.84e-10,82;UBERON:0007284,1.84e-10,82;UBERON:0001871,2.05e-10,6;UBERON:0002075,5.81e-10,18;UBERON:0001872,6.30e-10,5;UBERON:0002108,7.36e-10,4;UBERON:0002346,1.16e-09,86;UBERON:0002021,1.96e-09,5;UBERON:0001007,5.83e-08,145;UBERON:0001555,5.83e-08,145;UBERON:0007026,5.83e-08,145;UBERON:0004921,8.67e-08,118;UBERON:0001264,9.14e-08,10;UBERON:0002420,1.13e-07,9;UBERON:0007245,1.13e-07,9;UBERON:0010009,1.13e-07,9;UBERON:0010011,1.13e-07,9;UBERON:0000454,1.13e-07,9;UBERON:0001870,2.03e-07,3;UBERON:0000160,2.13e-07,17;UBERON:0002294,3.66e-07,9;UBERON:0001173,3.66e-07,9;UBERON:0004912,3.66e-07,9;UBERON:0005409,5.05e-07,25;UBERON:0004119,5.11e-07,160;UBERON:0000925,5.11e-07,160;UBERON:0006595,5.11e-07,160;UBERON:0001557,5.58e-07,19;UBERON:0010371,7.17e-07,104 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.541607727530031,0.128091319725675,0,0.164437904603676,0,0,0,0.267540828089713,1.04535523804977,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.352303495931295,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292311015483596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44211280183282,3.54027849164014,4.09718750801919,3.74999507290139,6.53638332277218,4.74541238222193,3.10112008768378,5.69042248863504,1.53898862778556,0,1.40241773803446,0,0,3.80265104465493,0.982827216677626,2.36315962672562,0,0.737930631258681,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.264145302039678,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0.177561725313127,0,0,0.232420756919918,0.362578348774867,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01091240786658,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,2.44773882019626,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,3.92064345569651,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0.222886768554957,0,0.95497793895076,0,0,6.95903353436409,5.48610724001,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,6.20091622916555,0.358042349351218,0,0,0,0,0.969332746095218,7.97805644191921,3.99227596002388,0,0,0,0.796554137998498,0,0.709163045303809,0,0,0,0,2.65312164975897,0,0,0,6.58156191461918,2.1787692703798,15.476035614925,0.153900517007594,0,0,0.0897576444097721,0.108647371922008,1.5950057986596,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,8.32487321611653,0,0,2.98578579323551,5.39591143470369,3.05515072466813,0,0,0,0.202203398942031,0,0,0,4.10895699757388,0,2.76209081994573,2.41981432097328,0.30607276163049,0.126373159256976,0,0,15.9516929449724,11.915710411518,11.3015850626601,5.97362148864794,7.11523865074482,0,6.59527005673497,4.60564267847575,0.174118413160805,0.17472666824203,0,5.03132922703243,6.21259195232577,5.66596653667144,0,0,0,0,0.19871461170299,8.29371427022011,5.08433595110488,1.84365286578528,2.13452994739353,19.7811513486309,0,0,0,0,0.49701014226173,0,0,0,0,0.288950589901519,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46068703786872,0.254019996197353,6.36183751847443,4.22230558945884,0,0.137539436597234,0,0,0,8.99093438538765,9.05673656518018,5.35878809634548,1.04909176269996,0,33.3474451159091,4.60596473566669,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,1.90517903781507,0,0,0.39669780522807,0.171086837884329,6.34333520085005,0,0,0,0,0,0,1.91502377331055,0,0,0.306345576763462,0,0,7.97461361970287,5.73523445039227,4.50687350543399,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.594719339945,0,0,0,0,0,4.43755459053117,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0.0788617450012534,0,0,0,5.26679645790968,1.41696576325585,1.91560630868582,7.38418911266718,1.51243017733031,3.94196339046042,5.97459888837849,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,12.9379814832976,3.252833896775,7.49667189264181,2.34323429584154,4.54710952302605,7.16598655191147,1.09394961803644,0,0,0.527613733078862,12.1374306257616,0,0,0.606965604236632,0.227662191351298,3.45939243634291,0,0,0.611727596791485,5.32759465859078,0,0,0.156986185701028,5.81327682689207,6.16598759290336,0,2.59113109462346,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0.118332000730565,0.340853619036631,0,1.60374807980835,1.5510319283216,0,1.00669888618013,1.17780280338292,0.121917924982269,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0,0,14.8946125148333,2.40415516554353,0,0,0,0.196308467114945,0,0,0,0,0,0,1.96409332466223,0,0,0,0,0,0,6.11923411718232,1.30905207102113,4.2322147241232,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0.18378979906969,0,0.2273360946547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| |||
|short_description=p3@GDA | |||
}} |
Latest revision as of 19:35, 17 September 2015
Short description: | p3@GDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GDA_5end |
Coexpression cluster: | C2946_large_tubular_gastric_papillary_embryonic_small_cervical |
Association with transcript: | 6bp_to_ENST00000475764_5end |
EntrezGene: | GDA |
HGNC: | 4212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.92e-19 | 106 |
adenocarcinoma | 8.57e-13 | 25 |
cell type cancer | 1.36e-11 | 143 |