FFCP PHASE1:Hg19::chr7:22767175..22767186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3569 | |EntrezGene=3569 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6018 | |HGNC=6018 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=356bp_to_ENST00000485300_5end | |association_with_transcript=356bp_to_ENST00000485300_5end | ||
|cluster_id=chr7:22767175..22767186,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_9_at_IL6_5end | |description=CAGE_peak_9_at_IL6_5end | ||
|id=chr7:22767175..22767186,+ | |id=chr7:22767175..22767186,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.26e-11!32;CL:0000192!7.39e-09!42;CL:0000514!7.39e-09!42;CL:0000569!1.83e-08!4;CL:0000011!1.83e-08!4;CL:0002595!6.59e-07!5 | |ontology_enrichment_celltype=CL:0000359!1.26e-11!32;CL:0000192!7.39e-09!42;CL:0000514!7.39e-09!42;CL:0000569!1.83e-08!4;CL:0000011!1.83e-08!4;CL:0002595!6.59e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.29e-16;33!CL:0002057;9.29e-16;33!CL:0002593;1.33e-15;2!CL:0002595;9.47e-14;5!CL:0000473;7.39e-11;39!CL:0000234;7.39e-11;39!CL:0000569;2.06e-08;4!CL:0000359;1.90e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,1.23e-15,2;CL:0002595,9.29e-14,5;CL:0000860,2.46e-13,42;CL:0002057,2.46e-13,42;CL:0000473,1.71e-11,48;CL:0000234,1.71e-11,48;CL:0002194,6.48e-09,59;CL:0000576,6.48e-09,59;CL:0000040,6.48e-09,59;CL:0000559,6.48e-09,59;CL:0002009,1.39e-08,61;CL:0000569,1.65e-08,4;CL:0000011,1.65e-08,4;CL:0000839,7.73e-08,66;CL:0000359,9.25e-08,32;CL:0000557,1.06e-07,67;CL:0000766,4.43e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;4.67e-09;42!CL:0000011;2.06e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!5.00e-17!14;DOID:193!4.82e-09!29;DOID:120!1.18e-08!27 | |||
|ontology_enrichment_disease_v019=DOID:3112;1.17e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,8.36e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.55e-11!42;UBERON:0003509!1.55e-11!42;UBERON:0004572!1.55e-11!42;UBERON:0004573!5.33e-11!33;UBERON:0004571!5.33e-11!33;UBERON:0004872!3.95e-08!84;UBERON:0000992!5.21e-08!13;UBERON:0001981!1.98e-07!60;UBERON:0007500!1.98e-07!60;UBERON:0004537!1.98e-07!60;UBERON:0006965!1.98e-07!60;UBERON:0002204!5.04e-07!167;UBERON:0003834!6.59e-07!5;UBERON:0001533!6.59e-07!5;UBERON:0003914!9.04e-07!118 | |ontology_enrichment_uberon=UBERON:0001637!1.55e-11!42;UBERON:0003509!1.55e-11!42;UBERON:0004572!1.55e-11!42;UBERON:0004573!5.33e-11!33;UBERON:0004571!5.33e-11!33;UBERON:0004872!3.95e-08!84;UBERON:0000992!5.21e-08!13;UBERON:0001981!1.98e-07!60;UBERON:0007500!1.98e-07!60;UBERON:0004537!1.98e-07!60;UBERON:0006965!1.98e-07!60;UBERON:0002204!5.04e-07!167;UBERON:0003834!6.59e-07!5;UBERON:0001533!6.59e-07!5;UBERON:0003914!9.04e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.33e-15;2!UBERON:0003834;9.47e-14;5!UBERON:0001533;9.47e-14;5!UBERON:0003513;5.65e-10;7!UBERON:0001282;1.17e-08;1!UBERON:0009842;1.17e-08;1!UBERON:0003704;1.17e-08;1!UBERON:0001171;1.17e-08;1!UBERON:0001172;1.17e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,1.23e-15,2;UBERON:0003834,9.29e-14,5;UBERON:0001533,9.29e-14,5;UBERON:0003513,5.57e-10,7;UBERON:0001282,1.13e-08,1;UBERON:0009842,1.13e-08,1;UBERON:0003704,1.13e-08,1;UBERON:0001171,1.13e-08,1;UBERON:0001172,1.13e-08,1;UBERON:0003081,1.77e-08,203;UBERON:0001637,1.02e-07,42;UBERON:0003509,1.02e-07,42;UBERON:0004572,1.02e-07,42;UBERON:0004573,1.67e-07,33;UBERON:0004571,1.67e-07,33;UBERON:0002204,3.28e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,1.37898272294647,0.645484683583826,0,0,0,0,5.50951006267625,0.320929027076094,1.27867425159808,0,0,0,19.4440189881151,12.4824749432051,12.4564449799115,0,0,0,12.7133895553007,1.84138817993782,6.32924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,1.05927344650575,0,0,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.928735856063958,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0.40101294060657,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,0,0,1.23213432070436,0.532306030317022,0,0.9266210955196,3.00562262158182,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0,0,1.94970791705028,1.05650146756755,0,0,0,0,0.66343897524122,1.31535265576129,0,0,0.608731130888112,0.30982349809975,0,0,0,1.07001315444375,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36730467016401,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0.400794101257669,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43429871466276,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,1.22538230705385,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.467426619694449,0,0.757612021100357,0,0,1.83072054717539,0.302461847526478,0.932623203496683,2.21782724984451,0.63718706865481,2.69881867298163,0.155262956876259,0,0.53168342911599,1.04349012362347,0.751288044986092,0.380805212168795,0,0.727394636810238,0.429642228169954,1.39210127963548,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,1.47394725759087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0,0.143444410785353,0,0,0.213454691755431,0,0,0,0,0,0,0,0 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| ||
|short_description=p9@IL6 | |short_description=p9@IL6 | ||
}} | }} |
Latest revision as of 19:34, 17 September 2015
Short description: | p9@IL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_IL6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 356bp_to_ENST00000485300_5end |
EntrezGene: | IL6 |
HGNC: | 6018 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 1.23e-15 | 2 |
smooth muscle cell of the subclavian artery | 9.29e-14 | 5 |
classical monocyte | 2.46e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.46e-13 | 42 |
defensive cell | 1.71e-11 | 48 |
phagocyte | 1.71e-11 | 48 |
monopoietic cell | 6.48e-09 | 59 |
monocyte | 6.48e-09 | 59 |
monoblast | 6.48e-09 | 59 |
promonocyte | 6.48e-09 | 59 |
macrophage dendritic cell progenitor | 1.39e-08 | 61 |
cardiac mesenchymal cell | 1.65e-08 | 4 |
migratory trunk neural crest cell | 1.65e-08 | 4 |
myeloid lineage restricted progenitor cell | 7.73e-08 | 66 |
vascular associated smooth muscle cell | 9.25e-08 | 32 |
granulocyte monocyte progenitor cell | 1.06e-07 | 67 |
myeloid leukocyte | 4.43e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 1.23e-15 | 2 |
thoracic segment blood vessel | 9.29e-14 | 5 |
subclavian artery | 9.29e-14 | 5 |
trunk blood vessel | 5.57e-10 | 7 |
intralobular bile duct | 1.13e-08 | 1 |
acinus | 1.13e-08 | 1 |
intrahepatic bile duct | 1.13e-08 | 1 |
portal lobule | 1.13e-08 | 1 |
hepatic acinus | 1.13e-08 | 1 |
lateral plate mesoderm | 1.77e-08 | 203 |
artery | 1.02e-07 | 42 |
arterial blood vessel | 1.02e-07 | 42 |
arterial system | 1.02e-07 | 42 |
systemic artery | 1.67e-07 | 33 |
systemic arterial system | 1.67e-07 | 33 |
musculoskeletal system | 3.28e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 8.36e-09 | 1 |