FFCP PHASE1:Hg19::chr12:2162144..2162196,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=775 | |EntrezGene=775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1390 | |HGNC=1390 | ||
|TSSclassifier=strong | |||
|UniProt=Q13936,E9PDJ1,E9PDJ0 | |UniProt=Q13936,E9PDJ1,E9PDJ0 | ||
|association_with_transcript=-219bp_to_NM_000719,NM_001129827,NM_001129829,NM_001129830,NM_001129831,NM_001129832,NM_001129833,NM_001129834,NM_001129835,NM_001129836,NM_001129837,NM_001129838,NM_001129839,NM_001129840,NM_001129841,NM_001129842,NM_001129843,NM_001129844,NM_001129846, | |association_with_transcript=-219bp_to_NM_000719,NM_001129827,NM_001129829,NM_001129830,NM_001129831,NM_001129832,NM_001129833,NM_001129834,NM_001129835,NM_001129836,NM_001129837,NM_001129838,NM_001129839,NM_001129840,NM_001129841,NM_001129842,NM_001129843,NM_001129844,NM_001129846,N | ||
|cluster_id=chr12:2162144..2162196,+ | |||
|coexpression_cluster_id=C3266 | |coexpression_cluster_id=C3266 | ||
|description=CAGE_peak_1_at_CACNA1C_5end | |description=CAGE_peak_1_at_CACNA1C_5end | ||
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|ontology_enrichment_celltype=CL:0000055!5.19e-19!180;CL:0000057!1.79e-15!75;CL:0002620!5.16e-09!23 | |ontology_enrichment_celltype=CL:0000055!5.19e-19!180;CL:0000057!1.79e-15!75;CL:0002620!5.16e-09!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.05e-09;23 | |ontology_enrichment_celltype_v019=CL:0002620;1.05e-09;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.31e-16,76;CL:0002620,1.02e-09,23 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.63e-08;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.63e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;3.99e-16;22!UBERON:0001869;5.18e-16;32!UBERON:0003528;1.12e-15;34!UBERON:0002020;1.12e-15;34!UBERON:0002791;1.30e-15;32!UBERON:0001893;1.68e-15;34!UBERON:0001950;5.24e-15;20!UBERON:0002780;7.11e-15;41!UBERON:0001890;7.11e-15;41!UBERON:0000073;2.30e-14;53!UBERON:0002616;2.30e-14;53!UBERON:0000956;3.07e-14;25!UBERON:0000203;3.07e-14;25!UBERON:0000955;1.28e-11;68!UBERON:0001017;6.88e-11;75!UBERON:0001016;2.97e-10;83!UBERON:0007023;2.82e-09;114!UBERON:0011216;4.39e-07;132 | |ontology_enrichment_uberon_v019=UBERON:0002619;3.99e-16;22!UBERON:0001869;5.18e-16;32!UBERON:0003528;1.12e-15;34!UBERON:0002020;1.12e-15;34!UBERON:0002791;1.30e-15;32!UBERON:0001893;1.68e-15;34!UBERON:0001950;5.24e-15;20!UBERON:0002780;7.11e-15;41!UBERON:0001890;7.11e-15;41!UBERON:0000073;2.30e-14;53!UBERON:0002616;2.30e-14;53!UBERON:0000956;3.07e-14;25!UBERON:0000203;3.07e-14;25!UBERON:0000955;1.28e-11;68!UBERON:0001017;6.88e-11;75!UBERON:0001016;2.97e-10;83!UBERON:0007023;2.82e-09;114!UBERON:0011216;4.39e-07;132 | ||
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| ||
|short_description=p1@CACNA1C | |short_description=p1@CACNA1C | ||
}} | }} |
Latest revision as of 19:29, 17 September 2015
Short description: | p1@CACNA1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CACNA1C_5end |
Coexpression cluster: | C3266_uterus_aorta_smooth_colon_Olfactory_Fibroblast_dura |
Association with transcript: | -219bp_to_NM_000719, NM_001129827, NM_001129829, NM_001129830, NM_001129831, NM_001129832, NM_001129833, NM_001129834, NM_001129835, NM_001129836, NM_001129837, NM_001129838, NM_001129839, NM_001129840, NM_001129841, NM_001129842, NM_001129843, NM_001129844, NM_001129846, N |
EntrezGene: | CACNA1C |
HGNC: | 1390 |
UniProt: | Q13936E9PDJ1E9PDJ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.31e-16 | 76 |
skin fibroblast | 1.02e-09 | 23 |