FFCP PHASE1:Hg19::chr21:17442981..17443002,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388815 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-431bp_to_ENST00000400178,uc010glc.2_5end | |||
|cluster_id=chr21:17442981..17443002,+ | |||
|coexpression_cluster_id=C1328 | |||
|description=CAGE_peak_7_at_LINC00478_5end | |||
|id=chr21:17442981..17443002,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000128;1.55e-10;7!CL:0000126;1.55e-10;7!CL:0000127;1.55e-10;7!CL:0002319;1.67e-08;25!CL:0002605;9.89e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.02e-10,7;CL:0000126,2.02e-10,7;CL:0000127,2.02e-10,7;CL:0002453,2.02e-10,7;CL:0002319,1.80e-08,25;CL:0002605,9.60e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.86e-12;82!UBERON:0006215;1.55e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72369481307503,1.02000345622126,1.25381888591235,7.72837165253853,3.14811177667634,3.64073654824928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.378139268656271,0.221729397462564,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.352303495931295,0.323745888736263,0,0.204154171254893,0,0.103325781175765,1.18800285728205,0,0,0,0,0.750711119231785,0,0.438977620880838,0,0.150238058906597,0,0.358779271377724,0.640672166455702,0.635795703478686,0.600182192168805,1.8549455262919,0.772921620136887,0.744467425326359,0.168776332241266,0,3.5340728394176,3.58994604704967,0.161646056818812,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977424915930974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,1.30139853857622,3.09315525111078,1.50764638800914,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,1.47702144595741,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0.229628896329213,0.546273504020151,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0.770243085573222,0.460511024178389,0,1.39646318328756,1.30515024522806,1.36362603865761,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,2.15846949099978,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0.211107635297664,0,0.379473173765715,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,4.81239927631679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57768678274367,0,0,0,0,0,1.9882952955326,4.78276015795743,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.66982576691332,9.98068990005971,0,0,0,0,0,0,0,0.583209226766509,0.173624994933292,5.31444831488303,9.52711865140723,12.2065389053667,22.0052727263137,10.6397142823277,2.63262476584767,0,0.139423744278603,3.84751292518985,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0.865554558968364,0,0.0884575645033392,0,0,0,0,1.07841812769083,1.60515529459758,2.10838001152805,0,0,0,1.57833761139756,1.20990716048664,10.1004011338062,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0.0821154570532092,0,23.9174103333966,0.677942222341597,0,0,4.7483096966909,0,0,0.85381197895741,0,0,2.74887830798198,0,0,0,0,0,0,0,2.88950589901519,3.00210144354895,1.09524303113594,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0.196854963029498,0,2.38568906942791,2.58786471611994,0,0,0,0,0,4.6777158626679,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,5.085370753095,0,0,0,0,0,0,0,0,0,0.904980694530854,1.58679122091228,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,4.43034089983493,4.27091927156871,4.256491644021,0,1.77486482458964,0.558867626472451,0,0.249960815924213,0,0.285465333544967,0,0,0,0.149254802886874,0.934853239388898,3.32883516901568,1.32582103692562,0.754703705257725,1.77962244319307,0,0,0,0,0,0,0.155262956876259,0.829412415681711,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28601152070365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61737217095023,0.471797825567689,0.873677105536111,0,1.06287460050841,0.247871528518004,0.558644917973244,0,0,0,0,0,4.752962657138,7.08482881627925,4.46974805360024,4.71767637753736,8.06629427909498,2.6971328461045,4.19836678642813,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,3.17426647706455,0.781078098613847,6.82066428453907,2.21955335678674,7.11067251723685,0,0.496211178389294,1.40696995487696,0.511049710558381,5.35701835878287,2.69026977775059,0.606965604236632,0.227662191351298,0,0,0,1.2914249265598,3.22286590457961,0,0,0.470958557103084,3.61365856806804,0,0,0,0,1.78691360441641,0,0.464965701472501,0,0,0,0,0,0,0.236664001461131,0,2.54032230114557,0,0,0,0.111855431797792,0,0,0,0.102662806856247,1.1598144313382,11.6570638334193,0,0,0.475680363110274,0,0,0,0,0.218559560503957,0,0.490296643507811,0.235676547101626,0.981542335574726,1.78227840196252,2.9585900930838,0,0,0,0,0,0,0,2.19100916473955,0,0.860037498908708,0.946629373159108,2.71965960763659,5.67255897442491,0.5290268405154,0.743990036333503,0.924351257262837,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,4.1458471972939,2.58582489654738,0,4.04709533488359,0,0.186224142887574,0,0,0,0,0.684466602170562,0,0.0717222053926763,3.99192427855216,0,0,0,0,0,7.57896953933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| |||
|short_description=p7@LINC00478 | |||
}} |
Latest revision as of 19:25, 17 September 2015
Short description: | p7@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LINC00478_5end |
Coexpression cluster: | C1328_extraskeletal_cerebellum_brain_duodenum_occipital_parietal_temporal |
Association with transcript: | -431bp_to_ENST00000400178, uc010glc.2_5end |
EntrezGene: | LINC00478 |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.02e-10 | 7 |
macroglial cell | 2.02e-10 | 7 |
astrocyte | 2.02e-10 | 7 |
oligodendrocyte precursor cell | 2.02e-10 | 7 |
neural cell | 1.80e-08 | 25 |
astrocyte of the cerebral cortex | 9.60e-08 | 3 |