FFCP PHASE1:Hg19::chr21:17442981..17443002,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388815 | |EntrezGene=388815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |HGNC=1274 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-431bp_to_ENST00000400178,uc010glc.2_5end | |association_with_transcript=-431bp_to_ENST00000400178,uc010glc.2_5end | ||
|cluster_id=chr21:17442981..17443002,+ | |||
|coexpression_cluster_id=C1328 | |||
|description=CAGE_peak_7_at_LINC00478_5end | |description=CAGE_peak_7_at_LINC00478_5end | ||
|id=chr21:17442981..17443002,+ | |id=chr21:17442981..17443002,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000128;1.55e-10;7!CL:0000126;1.55e-10;7!CL:0000127;1.55e-10;7!CL:0002319;1.67e-08;25!CL:0002605;9.89e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.02e-10,7;CL:0000126,2.02e-10,7;CL:0000127,2.02e-10,7;CL:0002453,2.02e-10,7;CL:0002319,1.80e-08,25;CL:0002605,9.60e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.86e-12;82!UBERON:0006215;1.55e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.15e-54!57;UBERON:0005068!1.15e-54!57;UBERON:0006241!1.15e-54!57;UBERON:0007135!1.15e-54!57;UBERON:0001017!1.70e-53!82;UBERON:0000073!2.38e-53!94;UBERON:0001016!2.38e-53!94;UBERON:0005743!3.52e-53!86;UBERON:0002616!5.23e-49!59;UBERON:0000955!3.59e-47!69;UBERON:0006238!3.59e-47!69;UBERON:0002346!1.29e-45!90;UBERON:0003075!3.84e-44!86;UBERON:0007284!3.84e-44!86;UBERON:0002780!4.93e-44!41;UBERON:0001890!4.93e-44!41;UBERON:0006240!4.93e-44!41;UBERON:0003080!1.36e-42!42;UBERON:0001893!1.05e-37!34;UBERON:0002020!1.73e-37!34;UBERON:0003528!1.73e-37!34;UBERON:0002791!1.18e-36!33;UBERON:0001869!3.47e-36!32;UBERON:0003056!2.96e-34!61;UBERON:0000924!1.18e-33!173;UBERON:0006601!1.18e-33!173;UBERON:0007023!2.68e-32!115;UBERON:0004121!3.82e-32!169;UBERON:0000033!4.86e-31!123;UBERON:0000153!1.50e-30!129;UBERON:0007811!1.50e-30!129;UBERON:0000956!9.50e-29!25;UBERON:0000203!9.50e-29!25;UBERON:0002619!1.79e-25!22;UBERON:0001950!1.50e-23!20;UBERON:0000475!2.38e-17!365;UBERON:0003076!7.86e-13!15;UBERON:0003057!7.86e-13!15;UBERON:0000467!5.18e-12!625;UBERON:0000468!6.34e-12!659;UBERON:0000480!6.51e-12!626;UBERON:0000119!7.94e-12!312;UBERON:0000062!9.82e-12!511;UBERON:0000483!1.98e-11!309;UBERON:0002420!1.52e-10!9;UBERON:0007245!1.52e-10!9;UBERON:0010009!1.52e-10!9;UBERON:0010011!1.52e-10!9;UBERON:0000454!1.52e-10!9;UBERON:0004733!3.20e-10!12;UBERON:0002028!3.20e-10!12;UBERON:0007277!3.20e-10!12;UBERON:0002308!4.34e-10!9;UBERON:0000125!4.34e-10!9;UBERON:0002680!5.46e-10!9;UBERON:0001895!5.46e-10!9;UBERON:0010092!5.46e-10!9;UBERON:0001871!8.18e-10!7;UBERON:0000481!1.27e-09!347;UBERON:0000064!1.87e-09!219;UBERON:0000922!2.17e-09!612;UBERON:0004732!3.57e-09!13;UBERON:0002050!4.47e-09!605;UBERON:0005423!4.47e-09!605;UBERON:0000923!1.19e-08!604;UBERON:0005291!1.19e-08!604;UBERON:0006598!1.19e-08!604;UBERON:0002532!1.19e-08!604;UBERON:0009663!1.60e-08!7;UBERON:0000200!5.88e-08!6;UBERON:0000025!9.38e-08!194;UBERON:0001894!1.19e-07!7;UBERON:0006222!1.19e-07!7;UBERON:0002037!1.26e-07!6;UBERON:0006215!1.26e-07!6;UBERON:0000479!2.36e-07!787;UBERON:0004111!2.76e-07!241;UBERON:0000477!3.08e-07!286;UBERON:0002021!4.08e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!1.15e-54!57;UBERON:0005068!1.15e-54!57;UBERON:0006241!1.15e-54!57;UBERON:0007135!1.15e-54!57;UBERON:0001017!1.70e-53!82;UBERON:0000073!2.38e-53!94;UBERON:0001016!2.38e-53!94;UBERON:0005743!3.52e-53!86;UBERON:0002616!5.23e-49!59;UBERON:0000955!3.59e-47!69;UBERON:0006238!3.59e-47!69;UBERON:0002346!1.29e-45!90;UBERON:0003075!3.84e-44!86;UBERON:0007284!3.84e-44!86;UBERON:0002780!4.93e-44!41;UBERON:0001890!4.93e-44!41;UBERON:0006240!4.93e-44!41;UBERON:0003080!1.36e-42!42;UBERON:0001893!1.05e-37!34;UBERON:0002020!1.73e-37!34;UBERON:0003528!1.73e-37!34;UBERON:0002791!1.18e-36!33;UBERON:0001869!3.47e-36!32;UBERON:0003056!2.96e-34!61;UBERON:0000924!1.18e-33!173;UBERON:0006601!1.18e-33!173;UBERON:0007023!2.68e-32!115;UBERON:0004121!3.82e-32!169;UBERON:0000033!4.86e-31!123;UBERON:0000153!1.50e-30!129;UBERON:0007811!1.50e-30!129;UBERON:0000956!9.50e-29!25;UBERON:0000203!9.50e-29!25;UBERON:0002619!1.79e-25!22;UBERON:0001950!1.50e-23!20;UBERON:0000475!2.38e-17!365;UBERON:0003076!7.86e-13!15;UBERON:0003057!7.86e-13!15;UBERON:0000467!5.18e-12!625;UBERON:0000468!6.34e-12!659;UBERON:0000480!6.51e-12!626;UBERON:0000119!7.94e-12!312;UBERON:0000062!9.82e-12!511;UBERON:0000483!1.98e-11!309;UBERON:0002420!1.52e-10!9;UBERON:0007245!1.52e-10!9;UBERON:0010009!1.52e-10!9;UBERON:0010011!1.52e-10!9;UBERON:0000454!1.52e-10!9;UBERON:0004733!3.20e-10!12;UBERON:0002028!3.20e-10!12;UBERON:0007277!3.20e-10!12;UBERON:0002308!4.34e-10!9;UBERON:0000125!4.34e-10!9;UBERON:0002680!5.46e-10!9;UBERON:0001895!5.46e-10!9;UBERON:0010092!5.46e-10!9;UBERON:0001871!8.18e-10!7;UBERON:0000481!1.27e-09!347;UBERON:0000064!1.87e-09!219;UBERON:0000922!2.17e-09!612;UBERON:0004732!3.57e-09!13;UBERON:0002050!4.47e-09!605;UBERON:0005423!4.47e-09!605;UBERON:0000923!1.19e-08!604;UBERON:0005291!1.19e-08!604;UBERON:0006598!1.19e-08!604;UBERON:0002532!1.19e-08!604;UBERON:0009663!1.60e-08!7;UBERON:0000200!5.88e-08!6;UBERON:0000025!9.38e-08!194;UBERON:0001894!1.19e-07!7;UBERON:0006222!1.19e-07!7;UBERON:0002037!1.26e-07!6;UBERON:0006215!1.26e-07!6;UBERON:0000479!2.36e-07!787;UBERON:0004111!2.76e-07!241;UBERON:0000477!3.08e-07!286;UBERON:0002021!4.08e-07!5 | ||
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| ||
|short_description=p7@LINC00478 | |short_description=p7@LINC00478 | ||
}} | }} |
Latest revision as of 19:25, 17 September 2015
Short description: | p7@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LINC00478_5end |
Coexpression cluster: | C1328_extraskeletal_cerebellum_brain_duodenum_occipital_parietal_temporal |
Association with transcript: | -431bp_to_ENST00000400178, uc010glc.2_5end |
EntrezGene: | LINC00478 |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.02e-10 | 7 |
macroglial cell | 2.02e-10 | 7 |
astrocyte | 2.02e-10 | 7 |
oligodendrocyte precursor cell | 2.02e-10 | 7 |
neural cell | 1.80e-08 | 25 |
astrocyte of the cerebral cortex | 9.60e-08 | 3 |