FFCP PHASE1:Hg19::chr2:16082155..16082169,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4613 | |EntrezGene=4613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7559 | |HGNC=7559 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=109bp_to_uc010yjr.1_5end | |association_with_transcript=109bp_to_uc010yjr.1_5end | ||
|cluster_id=chr2:16082155..16082169,+ | |||
|coexpression_cluster_id=C135 | |coexpression_cluster_id=C135 | ||
|description=CAGE_peak_3_at_MYCN_5end | |description=CAGE_peak_3_at_MYCN_5end | ||
|id=chr2:16082155..16082169,+ | |id=chr2:16082155..16082169,+ | ||
|ontology_enrichment_celltype=CL:0002139!7.46e-09!24;CL:0000039!8.00e-09!7;CL:0000586!8.00e-09!7;CL:0000047!8.36e-09!8;CL:0000115!3.25e-08!35;CL:0002078!1.35e-07!44;CL:0002322!4.15e-07!5;CL:0000540!4.46e-07!6;CL:0000031!4.46e-07!6;CL:0000404!4.46e-07!6 | |ontology_enrichment_celltype=CL:0002139!7.46e-09!24;CL:0000039!8.00e-09!7;CL:0000586!8.00e-09!7;CL:0000047!8.36e-09!8;CL:0000115!3.25e-08!35;CL:0002078!1.35e-07!44;CL:0002322!4.15e-07!5;CL:0000540!4.46e-07!6;CL:0000031!4.46e-07!6;CL:0000404!4.46e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002322;6.33e-16;5!CL:0000039;1.08e-15;7!CL:0000586;1.08e-15;7!CL:0002321;1.43e-12;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.54e-16,5;CL:0000039,1.17e-15,7;CL:0000586,1.17e-15,7;CL:0000047,5.80e-09,8;CL:0000115,4.69e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.51e-07;10!UBERON:0005564;1.51e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!2.78e-10!22;DOID:2994!2.78e-10!22 | |ontology_enrichment_disease=DOID:3095!2.78e-10!22;DOID:2994!2.78e-10!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;5.74e-18;22!DOID:2994;5.74e-18;22!DOID:169;1.09e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.84e-18,22;DOID:2994,6.84e-18,22;DOID:169,1.23e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.54e-16!94;UBERON:0001016!3.54e-16!94;UBERON:0005743!2.31e-14!86;UBERON:0001017!2.94e-13!82;UBERON:0007023!1.62e-11!115;UBERON:0002346!2.37e-10!90;UBERON:0001049!3.00e-10!57;UBERON:0005068!3.00e-10!57;UBERON:0006241!3.00e-10!57;UBERON:0007135!3.00e-10!57;UBERON:0001893!3.56e-10!34;UBERON:0003075!3.70e-10!86;UBERON:0007284!3.70e-10!86;UBERON:0002020!6.32e-10!34;UBERON:0003528!6.32e-10!34;UBERON:0002780!7.80e-10!41;UBERON:0001890!7.80e-10!41;UBERON:0006240!7.80e-10!41;UBERON:0002791!1.07e-09!33;UBERON:0003056!1.60e-09!61;UBERON:0003080!2.02e-09!42;UBERON:0001869!3.21e-09!32;UBERON:0000956!5.33e-09!25;UBERON:0000203!5.33e-09!25;UBERON:0000924!9.13e-09!173;UBERON:0006601!9.13e-09!173;UBERON:0001950!1.02e-08!20;UBERON:0004121!1.60e-08!169;UBERON:0002619!1.87e-08!22;UBERON:0002616!3.21e-08!59;UBERON:0000955!3.83e-08!69;UBERON:0006238!3.83e-08!69 | |ontology_enrichment_uberon=UBERON:0000073!3.54e-16!94;UBERON:0001016!3.54e-16!94;UBERON:0005743!2.31e-14!86;UBERON:0001017!2.94e-13!82;UBERON:0007023!1.62e-11!115;UBERON:0002346!2.37e-10!90;UBERON:0001049!3.00e-10!57;UBERON:0005068!3.00e-10!57;UBERON:0006241!3.00e-10!57;UBERON:0007135!3.00e-10!57;UBERON:0001893!3.56e-10!34;UBERON:0003075!3.70e-10!86;UBERON:0007284!3.70e-10!86;UBERON:0002020!6.32e-10!34;UBERON:0003528!6.32e-10!34;UBERON:0002780!7.80e-10!41;UBERON:0001890!7.80e-10!41;UBERON:0006240!7.80e-10!41;UBERON:0002791!1.07e-09!33;UBERON:0003056!1.60e-09!61;UBERON:0003080!2.02e-09!42;UBERON:0001869!3.21e-09!32;UBERON:0000956!5.33e-09!25;UBERON:0000203!5.33e-09!25;UBERON:0000924!9.13e-09!173;UBERON:0006601!9.13e-09!173;UBERON:0001950!1.02e-08!20;UBERON:0004121!1.60e-08!169;UBERON:0002619!1.87e-08!22;UBERON:0002616!3.21e-08!59;UBERON:0000955!3.83e-08!69;UBERON:0006238!3.83e-08!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;7.31e-08;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0.376627918784408,0,0,0,0.393364276848904,0,0,0,0,0,0,0,6.16560922603179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25199300053181,7.28661131875997,1.31692042387539,0,0,0,0,0.32592226663359,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0.0945348171640679,0,0.43917392846563,0.327447688744282,0,0,0,0,0,0,0,0.371457501329565,0.993812036833525,0,0.694281003215189,1.13061588384802,0,0,0.208994966536811,1.03366703667732,1.42306505074684,0.66944122552934,0.805658634218294,0,3.90499292077071,0.367663080345869,0,0.535798369704479,1.34717623575702,1.57656072676651,0,5.69559395740877,0.916008719652036,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8807921478106,14.8433340520063,12.3165579441689,6.84162963101445,11.6067591402789,8.75945661781992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0,0,0,0,0,2.89826012437692,0,0.288732895522148,0,1.33177906564219,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.621984346622316,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,1.30139853857622,0.773288812777695,0.837581326671744,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0,0.451199612907412,0.231046011313244,0,0,0,2.27466768141793,0.170093705276516,0.647747748306418,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.984043937099117,0,0.309123034943167,0,0,0,0,0,0.676695028044854,0,0,0,0,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7393458182376,12.9726591431331,24.1296766366782,9.73698480529861,0.649243880549111,22.7445714271902,0,0,25.0634477090067,27.0866844482565,0,0,0,0,0,0,0,0,0,0,2.70455678475983,11.6575188799237,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0.281338832821026,0,0,3.1668811219199,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,1.99613798001194,0,0,0,0,0,0,9.99755782400247,0,0.347249989866585,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0,0,0,0.307801034015188,0,13.3727064545075,16.6051642158078,0.760531603454056,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0,0,0.282706142867882,0.649165919226273,0.995261931078505,0,0,0,0,0,0.67401132980677,0,0.234264445725339,0,0,0,0,2.41981432097328,1.53036380815245,0.63186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.189932387867636,0.977756913674015,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,2.55493176133945,0,2.89176089707246,0,0,0.717873024576814,0,0,0,0.470284307407084,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,9.64518890790115,11.9659309839593,10.3860084507296,0,0,0.242998226632099,0,0.157611414598396,0.944182586429966,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0.320362237703084,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.250381861413,0,0,0.683060432355218,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,1.5652351854352,0,0,0.406870733204662,0,0.644463342254931,0,0,0,0,0,0,0,1.71553273099941,0,0,0,0,0,3.39681591877069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.0861154744011,18.5458675602293,0.157265941855896,218.419276384028,0,0.212574920101683,0.371807292777007,0,0,1.34064966502131,0,0,0,0.256916900385838,0,0.319267718114302,0.41023272848151,1.51243017733031,0.622415272177961,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0,0.451261970095544,0,0,4.7143205006656,0,0,0.337687923091973,0,0.206686796501184,0.380494861163441,1.09394961803644,0,0,0,0,0,2.01770233331294,0,0,0.266107110487916,0,0,0.747667062745149,0.460409414939944,0,0,0.313972371402056,0,0,0.913158720509496,0,0,0.428859265059938,36.5011443102598,0.929931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0.098150233615243,0,0,0.205325613712494,0,0.485710993059139,0,0.198950775161368,0,0.11294608203896,0.659643100472575,0,0.231522474323834,0.874238242015829,0,0.245148321753905,1.17838273550813,0.196308467114945,0,0.4226557275834,0,0.0939839179798536,0.644578879735772,0,0,0.705789743431384,0,0.730336388246517,0.458729283404541,0.143339583151451,0.946629373159108,0.475940431336403,0.872701380680755,0.5290268405154,0,0,0,13.1213081828482,9.50610476084151,0,3.05966489225945,9.61982658956018,19.6655085004568,3.25919801080088,0.0757786982182394,0.535928260312357,0,0.20686599172379,0,0.9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| ||
|short_description=p3@MYCN | |short_description=p3@MYCN | ||
}} | }} |
Latest revision as of 19:24, 17 September 2015
Short description: | p3@MYCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYCN_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 109bp_to_uc010yjr.1_5end |
EntrezGene: | MYCN |
HGNC: | 7559 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.54e-16 | 5 |
germ line cell | 1.17e-15 | 7 |
germ cell | 1.17e-15 | 7 |
neuronal stem cell | 5.80e-09 | 8 |
endothelial cell | 4.69e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.84e-18 | 22 |
germ cell cancer | 6.84e-18 | 22 |
neuroendocrine tumor | 1.23e-08 | 6 |