FFCP PHASE1:Hg19::chr19:38755042..38755091,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10653 | |EntrezGene=10653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11247 | |HGNC=11247 | ||
|TSSclassifier=strong | |||
|UniProt=O43291,B4DLU1 | |UniProt=O43291,B4DLU1 | ||
|association_with_transcript=-6bp_to_ENST00000301244,ENST00000454580,NM_001166103,NM_021102_5end | |association_with_transcript=-6bp_to_ENST00000301244,ENST00000454580,NM_001166103,NM_021102_5end | ||
|cluster_id=chr19:38755042..38755091,+ | |||
|description=CAGE_peak_5_at_SPINT2_5end | |description=CAGE_peak_5_at_SPINT2_5end | ||
|id=chr19:38755042..38755091,+ | |id=chr19:38755042..38755091,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.53e-27!172;CL:0000566!2.53e-27!172;CL:0000988!2.02e-26!182;CL:0002032!1.81e-25!165;CL:0000837!1.81e-25!165;CL:0000763!1.93e-24!112;CL:0000049!1.93e-24!112;CL:0000738!1.41e-21!140;CL:0000766!1.39e-18!76;CL:0000839!3.63e-18!70;CL:0002031!5.43e-18!124;CL:0000557!6.75e-18!71;CL:0002087!1.91e-16!119;CL:0002194!1.97e-15!63;CL:0000576!1.97e-15!63;CL:0000040!1.97e-15!63;CL:0000559!1.97e-15!63;CL:0002009!2.03e-15!65;CL:0002057!7.40e-14!42;CL:0000860!3.98e-12!45;CL:0000451!8.79e-07!10 | |ontology_enrichment_celltype=CL:0000037!2.53e-27!172;CL:0000566!2.53e-27!172;CL:0000988!2.02e-26!182;CL:0002032!1.81e-25!165;CL:0000837!1.81e-25!165;CL:0000763!1.93e-24!112;CL:0000049!1.93e-24!112;CL:0000738!1.41e-21!140;CL:0000766!1.39e-18!76;CL:0000839!3.63e-18!70;CL:0002031!5.43e-18!124;CL:0000557!6.75e-18!71;CL:0002087!1.91e-16!119;CL:0002194!1.97e-15!63;CL:0000576!1.97e-15!63;CL:0000040!1.97e-15!63;CL:0000559!1.97e-15!63;CL:0002009!2.03e-15!65;CL:0002057!7.40e-14!42;CL:0000860!3.98e-12!45;CL:0000451!8.79e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.46e-14;39!CL:0000234;2.46e-14;39!CL:0000860;1.72e-13;33!CL:0002057;1.72e-13;33!CL:0000576;7.43e-11;48!CL:0000766;1.87e-10;69!CL:0000763;3.13e-10;100!CL:1000507;3.50e-09;10!CL:1000494;3.50e-09;10!CL:1000497;9.86e-09;17!CL:0002518;9.86e-09;17!CL:1000449;1.87e-07;15!CL:0000451;2.68e-07;10!CL:0000236;6.72e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.73e-33,108;CL:0000049,2.73e-33,108;CL:0000037,4.85e-33,168;CL:0000988,2.47e-32,177;CL:0002032,1.63e-30,161;CL:0000837,1.63e-30,161;CL:0000766,7.50e-25,72;CL:0000738,1.96e-24,136;CL:0000839,3.80e-24,66;CL:0000557,3.58e-23,67;CL:0002194,4.48e-21,59;CL:0000576,4.48e-21,59;CL:0000040,4.48e-21,59;CL:0000559,4.48e-21,59;CL:0002009,2.00e-20,61;CL:0000473,7.69e-20,48;CL:0000234,7.69e-20,48;CL:0002031,1.18e-19,120;CL:0002087,1.68e-18,115;CL:0000860,2.44e-16,42;CL:0002057,2.44e-16,42;CL:1000507,3.32e-09,10;CL:1000494,3.32e-09,10;CL:1000497,1.11e-08,17;CL:0002518,1.11e-08,17;CL:1000449,2.16e-07,15;CL:0000451,2.57e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;2.26e-12;42!CL:0000049;3.70e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.10e-15!102;UBERON:0003061!2.10e-15!102;UBERON:0002193!5.17e-15!112;UBERON:0002371!2.89e-14!80;UBERON:0001474!3.84e-11!86;UBERON:0007023!7.35e-11!115;UBERON:0002405!9.26e-09!115;UBERON:0004765!2.60e-08!101;UBERON:0001434!2.60e-08!101 | |ontology_enrichment_uberon=UBERON:0002390!2.10e-15!102;UBERON:0003061!2.10e-15!102;UBERON:0002193!5.17e-15!112;UBERON:0002371!2.89e-14!80;UBERON:0001474!3.84e-11!86;UBERON:0007023!7.35e-11!115;UBERON:0002405!9.26e-09!115;UBERON:0004765!2.60e-08!101;UBERON:0001434!2.60e-08!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.50e-09;10!UBERON:0009773;3.50e-09;10!UBERON:0001231;3.50e-09;10!UBERON:0004810;3.50e-09;10!UBERON:0002113;1.33e-08;24!UBERON:0011143;1.33e-08;24!UBERON:0000489;8.94e-08;29!UBERON:0006555;1.87e-07;15!UBERON:0004819;1.87e-07;15!UBERON:0001285;1.87e-07;15!UBERON:0007684;1.87e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.01e-21,98;UBERON:0003061,8.01e-21,98;UBERON:0002193,2.27e-20,108;UBERON:0002371,6.18e-19,76;UBERON:0002405,8.81e-18,93;UBERON:0001474,6.37e-16,82;UBERON:0004765,3.75e-13,90;UBERON:0001434,1.78e-10,100;UBERON:0004810,3.32e-09,10;UBERON:0007023,3.48e-08,114;UBERON:0004211,2.16e-07,15;UBERON:0009773,2.16e-07,15;UBERON:0001231,2.16e-07,15;UBERON:0001285,2.16e-07,15;UBERON:0007684,2.16e-07,15;UBERON:0004208,2.16e-07,15;UBERON:0002113,3.11e-07,26;UBERON:0003918,3.11e-07,26;UBERON:0011143,3.11e-07,26;UBERON:0005095,3.11e-07,26;UBERON:0007687,3.11e-07,26 | |||
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|phase1_expression=0.54503513781167,0.856402095563933,0.563817616383885,2.00146596706261,0,0.872338524100369,0,0,0,0,0.697801167972428,0.436882744260345,0.527533956456907,0.37129905888014,1.65698687863958,0,0,0,0,0.861847406537515,0.612002073732759,0.626909442956176,0.85870796139317,0.684372125364421,0.502170558379211,0,0,0,3.14691421479123,1.53531759238885,7.7408061658038,0,0.6024118375565,0.369754010166788,0,0.568676929949686,17.6160263600908,5.53995408531877,2.00544447470142,5.859293509328,8.50878802111712,5.83008598834163,7.98484259665978,3.34415949192999,6.04601509902095,3.63876091781724,3.71886459049095,4.11167888021826,5.57471467611186,6.90461741573161,9.47794614157672,5.67557351732605,3.44745680736619,4.51839278508678,5.41705946377367,6.58848188399116,5.45812300115692,2.24723484445085,4.59125838556354,2.88836124368484,2.55734850319616,5.27762080298746,8.17800996248691,3.83602275479425,3.77272010217159,3.40431134814684,1.24564449799115,6.28121663141858,7.82224377630302,3.9093992046921,4.84319602106695,2.94622108790052,3.79754864929061,0.633765858935825,2.76385589954557,2.09658645508376,4.38081661471331,5.40636814229423,2.4108838004562,2.85012743741249,3.58050018958362,2.00930569141097,7.03984977845291,4.36910889009705,4.44754626931777,7.25441378363062,6.80673177961221,4.02326707968138,7.93253847341835,5.72432252721218,5.69212969109448,2.34894875748376,4.20500550937752,10.5737062863221,5.04457706683382,16.5931973408299,1.180258620683,3.14408610199332,1.23360899399706,1.17030546773475,0.32592226663359,1.89379122293893,1.94826728407911,0.891283655081389,2.3568472597987,1.55073726208535,0.541607727530031,3.33037431286755,1.56071217071854,0.822189523018381,0.829050053357545,0.869409257205157,1.18629250529648,3.47803076516627,3.1360657141493,0.566546713487831,0.766440987203842,0.68725489096526,0,1.91139248594458,2.60433381542567,1.90090408889675,1.95747654801105,0.76791966692651,0,1.18388626022008,0.821127996921047,0.201606743224732,1.60464117470104,1.73789284659359,0,0,0.383587685530591,0,0.50133791063589,0.869079113764942,0,0.973269740605272,1.98523116044542,8.64744650103999,8.25646985515385,2.61958150995425,0.728590576585084,0.370784442784429,46.7348246862744,48.0598074945978,81.9021036796209,20.0332124416487,16.0158575018436,24.5161950877513,0.39752481473341,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0.33472061276467,0.402829317109147,0.760272105718513,4.14905497831888,0,0,1.60739510911344,2.02076435363553,2.0270066486998,0,0,0.183201743930407,3.9534125230819,0,0,0.993943903390637,0.633152558322899,0.132409180813219,0.286836620748814,0.709336764396714,1.68203280042692,0,2.22000793575444,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0.453728732640084,0,0.427114777637135,0.211931901159562,0,0.206105058476878,0.257640540045629,0.558350568994769,0.168776332241266,0.194874010322397,0,0.184099797284599,0,0,0.302256294682921,0.339121184620975,0,0,0.286804595389004,0.609868530647977,0.397589304964456,1.04574548582567,1.65857688024593,1.26160425437814,0,0,1.92972281457866,2.76269842704961,0,0,0.236613600079688,1.01150814046861,0,0.110293972732394,0,0.237270619111097,0.269662616320329,0.392442930250692,0.38474715694639,1.4763109092493,0,0.8231480226628,0,0,0,1.18157981336281,0,0.122988438543114,1.88724591328378,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,4.3299402607582,6.60803308357938,3.87448690978212,4.18662698507114,5.09284063834272,5.13686211033415,0,0,11.5721992861077,2.80805118167085,9.95828787334479,0.93733833986777,0.503946384596579,0.567100388969546,0.53735113621709,0,0,0.492663237895943,14.0877494421162,10.1590776614978,11.38547631994,19.6938196145153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0,0,0.499864955910285,12.162378064119,12.5564272858032,4.21667878966063,0.958499421966331,1.14861935834114,0,0,0,0,0,0.394061520403854,0.215627574859517,1.15508732651774,0,5.20559415430487,0.773288812777695,2.01019518401218,0,2.24702107184155,2.99161459204025,3.72973962092432,0.24538298343828,0,0,2.28767947683888,2.14114786556594,2.83864347061082,1.99140405487612,0.300946099727719,0,0,0,1.10621501125022,0.0868836144680828,0.587403472388222,1.02943027143257,3.72182447021197,2.5885704098234,1.81436848265855,0,1.66435439510497,1.81434175997808,0.248107807818777,0.153461973288062,0,0.384417447767103,2.04682899626681,0.482561763430822,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,10.3775910968705,8.31765640727679,35.2957396129585,17.5367069583913,14.8827796738955,1.13733384070897,0,2.80690690932781,3.08454505380579,18.424357752982,29.5996966574364,11.4694322870267,4.98645605357235,30.2230918874941,3.50815802633495,6.01301537357271,5.38545262744417,6.23227826829441,2.60302715731442,1.64865618636356,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.255679882248303,0,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0.715624433709956,0.372158369359667,0.632758849437452,0.381260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| ||
|short_description=p5@SPINT2 | |short_description=p5@SPINT2 | ||
}} | }} |
Latest revision as of 19:05, 17 September 2015
Short description: | p5@SPINT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPINT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000301244, ENST00000454580, NM_001166103, NM_021102_5end |
EntrezGene: | SPINT2 |
HGNC: | 11247 |
UniProt: | O43291B4DLU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.73e-33 | 108 |
common myeloid progenitor | 2.73e-33 | 108 |
hematopoietic stem cell | 4.85e-33 | 168 |
hematopoietic cell | 2.47e-32 | 177 |
hematopoietic oligopotent progenitor cell | 1.63e-30 | 161 |
hematopoietic multipotent progenitor cell | 1.63e-30 | 161 |
myeloid leukocyte | 7.50e-25 | 72 |
leukocyte | 1.96e-24 | 136 |
myeloid lineage restricted progenitor cell | 3.80e-24 | 66 |
granulocyte monocyte progenitor cell | 3.58e-23 | 67 |
monopoietic cell | 4.48e-21 | 59 |
monocyte | 4.48e-21 | 59 |
monoblast | 4.48e-21 | 59 |
promonocyte | 4.48e-21 | 59 |
macrophage dendritic cell progenitor | 2.00e-20 | 61 |
defensive cell | 7.69e-20 | 48 |
phagocyte | 7.69e-20 | 48 |
hematopoietic lineage restricted progenitor cell | 1.18e-19 | 120 |
nongranular leukocyte | 1.68e-18 | 115 |
classical monocyte | 2.44e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.44e-16 | 42 |
kidney tubule cell | 3.32e-09 | 10 |
nephron tubule epithelial cell | 3.32e-09 | 10 |
kidney cell | 1.11e-08 | 17 |
kidney epithelial cell | 1.11e-08 | 17 |
epithelial cell of nephron | 2.16e-07 | 15 |
dendritic cell | 2.57e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.01e-21 | 98 |
blood island | 8.01e-21 | 98 |
hemolymphoid system | 2.27e-20 | 108 |
bone marrow | 6.18e-19 | 76 |
immune system | 8.81e-18 | 93 |
bone element | 6.37e-16 | 82 |
skeletal element | 3.75e-13 | 90 |
skeletal system | 1.78e-10 | 100 |
nephron tubule epithelium | 3.32e-09 | 10 |
adult organism | 3.48e-08 | 114 |
nephron epithelium | 2.16e-07 | 15 |
renal tubule | 2.16e-07 | 15 |
nephron tubule | 2.16e-07 | 15 |
nephron | 2.16e-07 | 15 |
uriniferous tubule | 2.16e-07 | 15 |
nephrogenic mesenchyme | 2.16e-07 | 15 |
kidney | 3.11e-07 | 26 |
kidney mesenchyme | 3.11e-07 | 26 |
upper urinary tract | 3.11e-07 | 26 |
kidney rudiment | 3.11e-07 | 26 |
kidney field | 3.11e-07 | 26 |