FFCP PHASE1:Hg19::chr2:58134822..58134832,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7444 | |EntrezGene=7444 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12719 | |HGNC=12719 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000463222_5end | |association_with_transcript=31bp_to_ENST00000463222_5end | ||
|cluster_id=chr2:58134822..58134832,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_9_at_VRK2_5end | |description=CAGE_peak_9_at_VRK2_5end | ||
|id=chr2:58134822..58134832,+ | |id=chr2:58134822..58134832,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;5.16e-21;1!UBERON:0006241;6.78e-08;3!UBERON:0003057;6.78e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.96e-104!57;UBERON:0005068!2.96e-104!57;UBERON:0006241!2.96e-104!57;UBERON:0007135!2.96e-104!57;UBERON:0002616!3.50e-89!59;UBERON:0000955!8.14e-84!69;UBERON:0006238!8.14e-84!69;UBERON:0001017!1.57e-82!82;UBERON:0005743!1.96e-78!86;UBERON:0002780!6.14e-76!41;UBERON:0001890!6.14e-76!41;UBERON:0006240!6.14e-76!41;UBERON:0003080!4.98e-74!42;UBERON:0001893!1.94e-71!34;UBERON:0002020!2.21e-71!34;UBERON:0003528!2.21e-71!34;UBERON:0003075!6.54e-71!86;UBERON:0007284!6.54e-71!86;UBERON:0000073!1.88e-70!94;UBERON:0001016!1.88e-70!94;UBERON:0002791!1.68e-67!33;UBERON:0002346!1.83e-67!90;UBERON:0001869!4.67e-63!32;UBERON:0007023!1.18e-61!115;UBERON:0003056!1.89e-49!61;UBERON:0002619!7.75e-48!22;UBERON:0000033!2.95e-47!123;UBERON:0001950!6.24e-46!20;UBERON:0000153!9.61e-45!129;UBERON:0007811!9.61e-45!129;UBERON:0000956!6.73e-42!25;UBERON:0000203!6.73e-42!25;UBERON:0004121!2.24e-36!169;UBERON:0000924!2.25e-35!173;UBERON:0006601!2.25e-35!173;UBERON:0002308!6.87e-33!9;UBERON:0000125!6.87e-33!9;UBERON:0003076!1.09e-29!15;UBERON:0003057!1.09e-29!15;UBERON:0002298!2.04e-28!8;UBERON:0000200!2.53e-27!6;UBERON:0000025!1.00e-25!194;UBERON:0002420!3.81e-25!9;UBERON:0007245!3.81e-25!9;UBERON:0010009!3.81e-25!9;UBERON:0010011!3.81e-25!9;UBERON:0000454!3.81e-25!9;UBERON:0009663!3.35e-24!7;UBERON:0004733!6.92e-24!12;UBERON:0002028!6.92e-24!12;UBERON:0007277!6.92e-24!12;UBERON:0004732!5.92e-22!13;UBERON:0004111!3.06e-19!241;UBERON:0000477!3.19e-16!286;UBERON:0006331!3.24e-15!3;UBERON:0000988!4.75e-15!3;UBERON:0001872!4.87e-15!5;UBERON:0001896!1.06e-14!3;UBERON:0005290!1.06e-14!3;UBERON:0010096!1.06e-14!3;UBERON:0002771!1.34e-14!3;UBERON:0000483!2.32e-14!309;UBERON:0001871!3.18e-14!7;UBERON:0000119!3.78e-14!312;UBERON:0000064!1.32e-13!219;UBERON:0002680!5.84e-13!9;UBERON:0001895!5.84e-13!9;UBERON:0010092!5.84e-13!9;UBERON:0000475!6.61e-13!365;UBERON:0001897!2.45e-11!2;UBERON:0000369!4.33e-11!4;UBERON:0002435!4.33e-11!4;UBERON:0000204!4.33e-11!4;UBERON:0010082!4.33e-11!4;UBERON:0001875!7.59e-11!2;UBERON:0006514!7.59e-11!2;UBERON:0001870!1.12e-10!2;UBERON:0002148!1.42e-10!2;UBERON:0009662!1.42e-10!2;UBERON:0000349!2.58e-09!5;UBERON:0002021!1.00e-08!5;UBERON:0000062!2.96e-08!511;UBERON:0002240!1.92e-07!3;UBERON:0001894!4.00e-07!7;UBERON:0006222!4.00e-07!7;UBERON:0005383!5.55e-07!3;UBERON:0005382!5.55e-07!3 | |||
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|short_description=p9@VRK2 | |short_description=p9@VRK2 | ||
}} | }} |
Latest revision as of 19:01, 17 September 2015
Short description: | p9@VRK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_VRK2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 31bp_to_ENST00000463222_5end |
EntrezGene: | VRK2 |
HGNC: | 12719 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data