FFCP PHASE1:Hg19::chr19:38720294..38720348,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8193 | |EntrezGene=8193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20225 | |HGNC=20225 | ||
|TSSclassifier=strong | |||
|UniProt=Q92782,F8WEC4,Q6PJ73 | |UniProt=Q92782,F8WEC4,Q6PJ73 | ||
|association_with_transcript=0bp_to_ENST00000412732,ENST00000418517,ENST00000434076,ENST00000456296,ENST00000475938,NM_001135156,uc002ohn.2,uc010xtu.1,uc010xtv.1,uc010xtw.1_5end | |association_with_transcript=0bp_to_ENST00000412732,ENST00000418517,ENST00000434076,ENST00000456296,ENST00000475938,NM_001135156,uc002ohn.2,uc010xtu.1,uc010xtv.1,uc010xtw.1_5end | ||
|cluster_id=chr19:38720294..38720348,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_1_at_DPF1_5end | |description=CAGE_peak_1_at_DPF1_5end | ||
|id=chr19:38720294..38720348,- | |id=chr19:38720294..38720348,- | ||
|ontology_enrichment_celltype=CL:0000055!1.33e-16!180;CL:0000133!4.36e-11!59;CL:0000333!2.65e-08!41;CL:0002319!4.95e-08!25;CL:0000221!6.29e-08!71;CL:0002321!1.78e-07!248;CL:0000393!4.44e-07!60;CL:0000211!4.44e-07!60;CL:0000220!5.17e-07!246 | |ontology_enrichment_celltype=CL:0000055!1.33e-16!180;CL:0000133!4.36e-11!59;CL:0000333!2.65e-08!41;CL:0002319!4.95e-08!25;CL:0000221!6.29e-08!71;CL:0002321!1.78e-07!248;CL:0000393!4.44e-07!60;CL:0000211!4.44e-07!60;CL:0000220!5.17e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.46e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.16e-09,25;CL:0000133,4.90e-09,59;CL:0000333,4.00e-08,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.34e-32!94;UBERON:0001016!3.34e-32!94;UBERON:0001017!3.37e-32!82;UBERON:0005743!1.91e-31!86;UBERON:0000955!5.15e-26!69;UBERON:0006238!5.15e-26!69;UBERON:0004121!1.19e-25!169;UBERON:0000924!9.17e-25!173;UBERON:0006601!9.17e-25!173;UBERON:0001049!2.26e-24!57;UBERON:0005068!2.26e-24!57;UBERON:0006241!2.26e-24!57;UBERON:0007135!2.26e-24!57;UBERON:0003075!4.14e-24!86;UBERON:0007284!4.14e-24!86;UBERON:0002616!5.12e-23!59;UBERON:0002346!1.21e-22!90;UBERON:0001893!8.50e-22!34;UBERON:0002020!1.03e-21!34;UBERON:0003528!1.03e-21!34;UBERON:0001869!3.35e-21!32;UBERON:0000033!3.36e-21!123;UBERON:0002791!4.33e-21!33;UBERON:0000153!1.85e-19!129;UBERON:0007811!1.85e-19!129;UBERON:0002780!1.99e-19!41;UBERON:0001890!1.99e-19!41;UBERON:0006240!1.99e-19!41;UBERON:0000119!1.47e-18!312;UBERON:0003080!2.01e-18!42;UBERON:0003056!7.21e-18!61;UBERON:0000483!7.97e-18!309;UBERON:0000956!9.56e-17!25;UBERON:0000203!9.56e-17!25;UBERON:0000475!1.89e-15!365;UBERON:0002619!6.22e-15!22;UBERON:0000025!9.21e-14!194;UBERON:0001950!1.00e-13!20;UBERON:0000481!4.50e-11!347;UBERON:0004111!6.14e-11!241;UBERON:0000477!1.35e-10!286;UBERON:0000064!9.49e-08!219;UBERON:0000914!3.23e-07!83;UBERON:0002329!3.23e-07!83;UBERON:0003077!3.23e-07!83;UBERON:0003059!3.23e-07!83;UBERON:0007282!3.23e-07!83;UBERON:0009618!3.23e-07!83;UBERON:0007285!3.23e-07!83;UBERON:0003076!3.77e-07!15;UBERON:0003057!3.77e-07!15;UBERON:0002420!8.49e-07!9;UBERON:0007245!8.49e-07!9;UBERON:0010009!8.49e-07!9;UBERON:0010011!8.49e-07!9;UBERON:0000454!8.49e-07!9 | |ontology_enrichment_uberon=UBERON:0000073!3.34e-32!94;UBERON:0001016!3.34e-32!94;UBERON:0001017!3.37e-32!82;UBERON:0005743!1.91e-31!86;UBERON:0000955!5.15e-26!69;UBERON:0006238!5.15e-26!69;UBERON:0004121!1.19e-25!169;UBERON:0000924!9.17e-25!173;UBERON:0006601!9.17e-25!173;UBERON:0001049!2.26e-24!57;UBERON:0005068!2.26e-24!57;UBERON:0006241!2.26e-24!57;UBERON:0007135!2.26e-24!57;UBERON:0003075!4.14e-24!86;UBERON:0007284!4.14e-24!86;UBERON:0002616!5.12e-23!59;UBERON:0002346!1.21e-22!90;UBERON:0001893!8.50e-22!34;UBERON:0002020!1.03e-21!34;UBERON:0003528!1.03e-21!34;UBERON:0001869!3.35e-21!32;UBERON:0000033!3.36e-21!123;UBERON:0002791!4.33e-21!33;UBERON:0000153!1.85e-19!129;UBERON:0007811!1.85e-19!129;UBERON:0002780!1.99e-19!41;UBERON:0001890!1.99e-19!41;UBERON:0006240!1.99e-19!41;UBERON:0000119!1.47e-18!312;UBERON:0003080!2.01e-18!42;UBERON:0003056!7.21e-18!61;UBERON:0000483!7.97e-18!309;UBERON:0000956!9.56e-17!25;UBERON:0000203!9.56e-17!25;UBERON:0000475!1.89e-15!365;UBERON:0002619!6.22e-15!22;UBERON:0000025!9.21e-14!194;UBERON:0001950!1.00e-13!20;UBERON:0000481!4.50e-11!347;UBERON:0004111!6.14e-11!241;UBERON:0000477!1.35e-10!286;UBERON:0000064!9.49e-08!219;UBERON:0000914!3.23e-07!83;UBERON:0002329!3.23e-07!83;UBERON:0003077!3.23e-07!83;UBERON:0003059!3.23e-07!83;UBERON:0007282!3.23e-07!83;UBERON:0009618!3.23e-07!83;UBERON:0007285!3.23e-07!83;UBERON:0003076!3.77e-07!15;UBERON:0003057!3.77e-07!15;UBERON:0002420!8.49e-07!9;UBERON:0007245!8.49e-07!9;UBERON:0010009!8.49e-07!9;UBERON:0010011!8.49e-07!9;UBERON:0000454!8.49e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.90e-27;32!UBERON:0001893;3.30e-27;34!UBERON:0002791;5.14e-27;32!UBERON:0003528;6.64e-27;34!UBERON:0002020;6.64e-27;34!UBERON:0000956;6.32e-24;25!UBERON:0000203;6.32e-24;25!UBERON:0002619;2.54e-21;22!UBERON:0002780;1.22e-20;41!UBERON:0001890;1.22e-20;41!UBERON:0001950;1.45e-19;20!UBERON:0000073;2.75e-19;53!UBERON:0002616;2.75e-19;53!UBERON:0000955;1.57e-15;68!UBERON:0001016;2.00e-15;83!UBERON:0001017;2.55e-15;75!UBERON:0002420;4.33e-09;9!UBERON:0007245;4.33e-09;9!UBERON:0010009;4.33e-09;9!UBERON:0010011;4.33e-09;9!UBERON:0000454;4.33e-09;9!UBERON:0000125;1.40e-08;9!UBERON:0002308;1.40e-08;9!UBERON:0009663;2.49e-07;7!UBERON:0000200;2.54e-07;6!UBERON:0004732;3.35e-07;13!UBERON:0002680;4.46e-07;9!UBERON:0001895;4.46e-07;9!UBERON:0011216;4.79e-07;132!UBERON:0004733;6.49e-07;12!UBERON:0002028;6.49e-07;12 | |||
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| ||
|short_description=p1@DPF1 | |short_description=p1@DPF1 | ||
}} | }} |
Latest revision as of 18:52, 17 September 2015
Short description: | p1@DPF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DPF1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000412732, ENST00000418517, ENST00000434076, ENST00000456296, ENST00000475938, NM_001135156, uc002ohn.2, uc010xtu.1, uc010xtv.1, uc010xtw.1_5end |
EntrezGene: | DPF1 |
HGNC: | 20225 |
UniProt: | Q92782F8WEC4Q6PJ73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.16e-09 | 25 |
neurectodermal cell | 4.90e-09 | 59 |
migratory neural crest cell | 4.00e-08 | 41 |