FFCP PHASE1:Hg19::chr6:30749900..30749919,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:30749900..30749919,+
|short_description=p1@HCG20
|description=CAGE_peak_1_at_HCG20_5end
|association_with_transcript=165bp_to_ENST00000422944_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=31334 | |HGNC=31334 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=165bp_to_ENST00000422944_5end | |||
|cluster_id=chr6:30749900..30749919,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_HCG20_5end | |||
|id=chr6:30749900..30749919,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.59e-37!42;CL:0000860!3.61e-36!45;CL:0000766!1.09e-27!76;CL:0000557!5.16e-23!71;CL:0000839!1.75e-22!70;CL:0002194!1.38e-21!63;CL:0000576!1.38e-21!63;CL:0000040!1.38e-21!63;CL:0000559!1.38e-21!63;CL:0002009!1.57e-21!65;CL:0000763!4.83e-15!112;CL:0000049!4.83e-15!112;CL:0000738!9.90e-11!140;CL:0000012!1.35e-10!682;CL:0000548!2.77e-10!679;CL:0000004!2.77e-10!679;CL:0000255!2.77e-10!679;CL:0000063!1.14e-08!578;CL:0000144!1.63e-08!625;CL:0002371!2.56e-08!591;CL:0002031!5.31e-08!124;CL:0002087!6.25e-08!119;CL:0000723!1.19e-07!436;CL:0000048!1.27e-07!430;CL:0000003!1.97e-07!722;CL:0000034!2.30e-07!444;CL:0000134!3.66e-07!358;CL:0002320!7.01e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.66e-85;33!CL:0002057;8.66e-85;33!CL:0000473;2.45e-56;39!CL:0000234;2.45e-56;39!CL:0000576;1.20e-46;48!CL:0000766;2.78e-30;69!CL:0000763;6.80e-15;100!CL:0000767;1.03e-12;3!CL:0000094;2.39e-12;8!CL:0002087;5.65e-12;104!CL:0000081;6.72e-09;11!CL:0002589;2.09e-08;2!CL:0000738;2.13e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.11e-87,42;CL:0002057,2.11e-87,42;CL:0000473,1.61e-75,48;CL:0000234,1.61e-75,48;CL:0000766,6.33e-65,72;CL:0002194,7.02e-59,59;CL:0000576,7.02e-59,59;CL:0000040,7.02e-59,59;CL:0000559,7.02e-59,59;CL:0002009,9.84e-57,61;CL:0000839,6.31e-52,66;CL:0000557,4.75e-51,67;CL:0000763,1.14e-40,108;CL:0000049,1.14e-40,108;CL:0000738,1.42e-32,136;CL:0002087,1.01e-28,115;CL:0002031,2.43e-25,120;CL:0000037,9.07e-25,168;CL:0002032,1.40e-24,161;CL:0000837,1.40e-24,161;CL:0000988,4.43e-23,177;CL:0000767,1.23e-12,3;CL:0000094,2.33e-12,8;CL:0000134,7.94e-12,354;CL:0002320,2.05e-11,361;CL:0000034,1.80e-10,441;CL:0000048,2.52e-10,427;CL:0000723,4.80e-10,433;CL:0000219,5.75e-10,386;CL:0000081,6.61e-09,11;CL:0002589,3.19e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.86e-65;42!CL:0000049;1.84e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.13e-20!80;UBERON:0001474!5.10e-18!86;UBERON:0002390!4.15e-15!102;UBERON:0003061!4.15e-15!102;UBERON:0004765!5.29e-15!101;UBERON:0001434!5.29e-15!101;UBERON:0002405!1.08e-13!115;UBERON:0002193!1.19e-13!112;UBERON:0002204!2.79e-11!167;UBERON:0003081!4.20e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;2.09e-08;2!UBERON:0007204;2.09e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.47e-44,76;UBERON:0001474,1.94e-40,82;UBERON:0004765,3.29e-36,90;UBERON:0002390,5.40e-35,98;UBERON:0003061,5.40e-35,98;UBERON:0002405,8.26e-35,93;UBERON:0001434,7.23e-32,100;UBERON:0002193,4.57e-31,108;UBERON:0003081,8.98e-23,203;UBERON:0002204,4.27e-20,167;UBERON:0000926,2.24e-12,315;UBERON:0004120,2.24e-12,315;UBERON:0006603,2.24e-12,315;UBERON:0002384,7.45e-11,371;UBERON:0001529,3.19e-08,2;UBERON:0007204,3.19e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.975865597581014,0,0,0,0.286235987131057,0,0,0.152826811495903,0.0821005894499457,0,3.14691421479123,2.30297638858328,5.26374819274658,1.83884244895785,0,0.739508020333575,0,0,0,12.1878989877013,6.81851121398482,2.82114131930607,0,0,0,1.89017710413434,1.13362783106643,2.18325655069035,4.41615170120801,3.28934310417461,5.57471467611186,9.78154133895312,6.91633907628572,11.8241114944293,19.9952494827239,16.1371170895957,20.3139729891513,2.25890807451126,1.91034305040492,5.61808711112712,24.4867113896722,20.8603867599461,22.3767994029664,0.659702600373432,2.59302754908121,0.852449501065388,17.9929727949722,12.4824749432051,10.5879782329248,2.51248665256743,4.69334626578181,5.64690996233303,5.44859552370032,22.833213431229,22.7852918957437,0,0.425208599930087,0.209658645508376,0.898629049171961,0.150176892841506,0.32145117339416,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36305137788922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0.12663051166458,2.38336525463794,0.286836620748814,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0,0,0.151357427644931,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0.515281080091258,0,0,0.0974370051611986,0.252433774244115,0,0,0.710019185033229,0,0,0.57978255948989,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,0.492663237895943,0.528290604079356,0,0.432359860250884,0.25248486685276,0.253991577168676,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,1.58390374586686,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.335032530668698,0.637938751653163,0.749007023947182,2.99161459204025,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0.391602314925481,0,0.206768026122887,1.50999940573032,0.960548020230999,0,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.661139661443912,0.192190067365106,1.91419068741876,0.30347334256665,0,0.31481234683064,0,0,0,0,1.11194531462352,1.00187420719394,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,1.01455188481352,0.30982349809975,0.281695602532241,0.430234056612155,0.0982490410131212,0.7133421029625,0.354761064070598,0,0,0,0,0.673554789078584,0,2.17781969722645,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.335643173951685,0,0,0.210998064528027,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.261177619741208,0,0.343972064943233,0.0967563312890851,0.146178634172371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0.372757606696298,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.236349546921671,0.247247575143499,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0.285465333544967,0.235265819698172,0,0,0.597019211547496,0.701139929541673,0,0.378806010550178,0.50313580350515,0,0,0.151230923763239,1.24349760466224,1.47855149989634,0.318593534327405,0,0.155262956876259,0.414706207840855,0.53168342911599,0.521745061811734,0.751288044986092,0.761610424337591,0.406870733204662,0.909243296012797,0.322231671127465,0,0,0,0,0,0,0.192619830407303,0,0.521988583930423,0,0.231522474323834,0.244736704506468,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0.279759015438889,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0.118332000730565,0,0.846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| ||
|short_description=p1@HCG20 | |||
}} | }} |
Latest revision as of 18:45, 17 September 2015
Short description: | p1@HCG20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HCG20_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 165bp_to_ENST00000422944_5end |
EntrezGene: | NA |
HGNC: | 31334 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.47e-44 | 76 |
bone element | 1.94e-40 | 82 |
skeletal element | 3.29e-36 | 90 |
hematopoietic system | 5.40e-35 | 98 |
blood island | 5.40e-35 | 98 |
immune system | 8.26e-35 | 93 |
skeletal system | 7.23e-32 | 100 |
hemolymphoid system | 4.57e-31 | 108 |
lateral plate mesoderm | 8.98e-23 | 203 |
musculoskeletal system | 4.27e-20 | 167 |
mesoderm | 2.24e-12 | 315 |
mesoderm-derived structure | 2.24e-12 | 315 |
presumptive mesoderm | 2.24e-12 | 315 |
connective tissue | 7.45e-11 | 371 |
brachiocephalic artery | 3.19e-08 | 2 |
brachiocephalic vasculature | 3.19e-08 | 2 |