FFCP PHASE1:Hg19::chr4:40477770..40477783,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54502 | |EntrezGene=54502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30358 | |HGNC=30358 | ||
|TSSclassifier=strong | |||
|UniProt=D6RA49 | |UniProt=D6RA49 | ||
|association_with_transcript=-4bp_to_ENST00000507180_5end | |association_with_transcript=-4bp_to_ENST00000507180_5end | ||
|cluster_id=chr4:40477770..40477783,- | |||
|coexpression_cluster_id=C579 | |||
|description=CAGE_peak_23_at_RBM47_5end | |description=CAGE_peak_23_at_RBM47_5end | ||
|id=chr4:40477770..40477783,- | |id=chr4:40477770..40477783,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.62e-13;12!CL:0002553;2.42e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.45e-13,12;CL:0002553,2.96e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.26e-10!27;UBERON:0005409!2.19e-09!35;UBERON:0001155!2.32e-07!9;UBERON:0004921!8.70e-07!129;UBERON:0004185!8.70e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.71e-18;4!UBERON:0000160;8.29e-14;17!UBERON:0002107;5.99e-13;19!UBERON:0006925;5.99e-13;19!UBERON:0005409;8.74e-11;22!UBERON:0002423;8.12e-10;25!UBERON:0002365;3.70e-08;31!UBERON:0002330;3.70e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.66e-18,4;UBERON:0000160,8.75e-14,17;UBERON:0002107,5.34e-13,19;UBERON:0006925,5.34e-13,19;UBERON:0008836,5.34e-13,19;UBERON:0008835,3.26e-11,22;UBERON:0003894,3.26e-11,22;UBERON:0009854,1.01e-10,23;UBERON:0007499,7.45e-10,25;UBERON:0009497,7.45e-10,25;UBERON:0000015,7.45e-10,25;UBERON:0002423,7.45e-10,25;UBERON:0006235,7.45e-10,25;UBERON:0004161,7.45e-10,25;UBERON:0005409,1.65e-09,25;UBERON:0009856,1.80e-09,26;UBERON:0004921,1.81e-08,118;UBERON:0002365,6.41e-08,31;UBERON:0002330,6.41e-08,31;UBERON:0002368,5.37e-07,35 | |||
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| ||
|short_description=p23@RBM47 | |short_description=p23@RBM47 | ||
}} | }} |
Latest revision as of 18:38, 17 September 2015
Short description: | p23@RBM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_RBM47_5end |
Coexpression cluster: | C579_small_argyrophil_colon_duodenum_signet_temporal_Intestinal |
Association with transcript: | -4bp_to_ENST00000507180_5end |
EntrezGene: | RBM47 |
HGNC: | 30358 |
UniProt: | D6RA49 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.45e-13 | 12 |
lung fibroblast | 2.96e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.66e-18 | 4 |
intestine | 8.75e-14 | 17 |
liver | 5.34e-13 | 19 |
digestive gland | 5.34e-13 | 19 |
liver bud | 5.34e-13 | 19 |
hepatic diverticulum | 3.26e-11 | 22 |
liver primordium | 3.26e-11 | 22 |
digestive tract diverticulum | 1.01e-10 | 23 |
epithelial sac | 7.45e-10 | 25 |
epithelium of foregut-midgut junction | 7.45e-10 | 25 |
anatomical boundary | 7.45e-10 | 25 |
hepatobiliary system | 7.45e-10 | 25 |
foregut-midgut junction | 7.45e-10 | 25 |
septum transversum | 7.45e-10 | 25 |
gastrointestinal system | 1.65e-09 | 25 |
sac | 1.80e-09 | 26 |
subdivision of digestive tract | 1.81e-08 | 118 |
exocrine gland | 6.41e-08 | 31 |
exocrine system | 6.41e-08 | 31 |
endocrine gland | 5.37e-07 | 35 |