FFCP PHASE1:Hg19::chr4:40244317..40244328,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399 | |EntrezGene=399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=686 | |HGNC=686 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_AY673956_5end | |association_with_transcript=-5bp_to_AY673956_5end | ||
|cluster_id=chr4:40244317..40244328,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_14_at_RHOH_5end | |description=CAGE_peak_14_at_RHOH_5end | ||
|id=chr4:40244317..40244328,+ | |id=chr4:40244317..40244328,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.47e-44!42;CL:0000860!6.13e-41!45;CL:0002194!2.73e-29!63;CL:0000576!2.73e-29!63;CL:0000040!2.73e-29!63;CL:0000559!2.73e-29!63;CL:0002009!3.37e-28!65;CL:0000839!5.85e-28!70;CL:0000557!1.79e-27!71;CL:0000766!3.06e-25!76;CL:0002087!2.32e-19!119;CL:0000738!7.05e-18!140;CL:0002031!7.38e-17!124;CL:0000763!2.17e-16!112;CL:0000049!2.17e-16!112;CL:0000037!4.24e-13!172;CL:0000566!4.24e-13!172;CL:0000988!5.88e-12!182;CL:0002032!7.08e-12!165;CL:0000837!7.08e-12!165 | |ontology_enrichment_celltype=CL:0002057!2.47e-44!42;CL:0000860!6.13e-41!45;CL:0002194!2.73e-29!63;CL:0000576!2.73e-29!63;CL:0000040!2.73e-29!63;CL:0000559!2.73e-29!63;CL:0002009!3.37e-28!65;CL:0000839!5.85e-28!70;CL:0000557!1.79e-27!71;CL:0000766!3.06e-25!76;CL:0002087!2.32e-19!119;CL:0000738!7.05e-18!140;CL:0002031!7.38e-17!124;CL:0000763!2.17e-16!112;CL:0000049!2.17e-16!112;CL:0000037!4.24e-13!172;CL:0000566!4.24e-13!172;CL:0000988!5.88e-12!182;CL:0002032!7.08e-12!165;CL:0000837!7.08e-12!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-52;33!CL:0002057;1.43e-52;33!CL:0000473;9.56e-32;39!CL:0000234;9.56e-32;39!CL:0000576;1.59e-26;48!CL:0002087;5.19e-14;104!CL:0000766;1.06e-13;69!CL:0000763;4.70e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.37e-52,42;CL:0002057,8.37e-52,42;CL:0000473,3.52e-45,48;CL:0000234,3.52e-45,48;CL:0002194,6.73e-36,59;CL:0000576,6.73e-36,59;CL:0000040,6.73e-36,59;CL:0000559,6.73e-36,59;CL:0002009,1.06e-34,61;CL:0000839,5.14e-32,66;CL:0000557,1.59e-31,67;CL:0000766,2.81e-29,72;CL:0002087,6.15e-21,115;CL:0002031,5.18e-20,120;CL:0000763,3.69e-19,108;CL:0000049,3.69e-19,108;CL:0000738,1.67e-17,136;CL:0002032,1.44e-14,161;CL:0000837,1.44e-14,161;CL:0000037,6.69e-14,168;CL:0000988,4.05e-13,177;CL:0000134,8.46e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;4.90e-34;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.62e-27!102;UBERON:0003061!1.62e-27!102;UBERON:0002193!4.64e-26!112;UBERON:0002371!1.18e-23!80;UBERON:0001474!1.90e-23!86;UBERON:0002405!1.10e-21!115;UBERON:0004765!5.82e-19!101;UBERON:0001434!5.82e-19!101;UBERON:0002204!1.24e-10!167;UBERON:0003081!1.08e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.09e-27,76;UBERON:0001474,1.36e-25,82;UBERON:0004765,3.19e-23,90;UBERON:0002405,1.94e-22,93;UBERON:0002390,3.09e-21,98;UBERON:0003061,3.09e-21,98;UBERON:0001434,8.68e-21,100;UBERON:0002193,3.69e-19,108;UBERON:0002204,6.50e-12,167;UBERON:0003081,1.55e-09,203 | |||
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| ||
|short_description=p14@RHOH | |short_description=p14@RHOH | ||
}} | }} |
Latest revision as of 18:26, 17 September 2015
Short description: | p14@RHOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RHOH_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -5bp_to_AY673956_5end |
EntrezGene: | RHOH |
HGNC: | 686 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.37e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.37e-52 | 42 |
defensive cell | 3.52e-45 | 48 |
phagocyte | 3.52e-45 | 48 |
monopoietic cell | 6.73e-36 | 59 |
monocyte | 6.73e-36 | 59 |
monoblast | 6.73e-36 | 59 |
promonocyte | 6.73e-36 | 59 |
macrophage dendritic cell progenitor | 1.06e-34 | 61 |
myeloid lineage restricted progenitor cell | 5.14e-32 | 66 |
granulocyte monocyte progenitor cell | 1.59e-31 | 67 |
myeloid leukocyte | 2.81e-29 | 72 |
nongranular leukocyte | 6.15e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 5.18e-20 | 120 |
myeloid cell | 3.69e-19 | 108 |
common myeloid progenitor | 3.69e-19 | 108 |
leukocyte | 1.67e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.44e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-14 | 161 |
hematopoietic stem cell | 6.69e-14 | 168 |
hematopoietic cell | 4.05e-13 | 177 |
mesenchymal cell | 8.46e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.09e-27 | 76 |
bone element | 1.36e-25 | 82 |
skeletal element | 3.19e-23 | 90 |
immune system | 1.94e-22 | 93 |
hematopoietic system | 3.09e-21 | 98 |
blood island | 3.09e-21 | 98 |
skeletal system | 8.68e-21 | 100 |
hemolymphoid system | 3.69e-19 | 108 |
musculoskeletal system | 6.50e-12 | 167 |
lateral plate mesoderm | 1.55e-09 | 203 |