FFCP PHASE1:Hg19::chr2:56150599..56150675,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2202 | |EntrezGene=2202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3218 | |HGNC=3218 | ||
|TSSclassifier=strong | |||
|UniProt=Q12805 | |UniProt=Q12805 | ||
|association_with_transcript=-243bp_to_ENST00000394554,uc002rzh.2_5end | |association_with_transcript=-243bp_to_ENST00000394554,uc002rzh.2_5end | ||
|cluster_id=chr2:56150599..56150675,- | |||
|description=CAGE_peak_3_at_EFEMP1_5end | |description=CAGE_peak_3_at_EFEMP1_5end | ||
|id=chr2:56150599..56150675,- | |id=chr2:56150599..56150675,- | ||
|ontology_enrichment_celltype=CL:0000222!1.10e-14!119;CL:0000220!3.04e-14!246;CL:0000066!3.86e-14!254;CL:0000076!4.19e-14!62;CL:0002321!9.60e-14!248;CL:0000213!1.52e-12!57;CL:0000215!1.52e-12!57;CL:0002139!2.83e-11!24;CL:0000055!9.62e-10!180;CL:0000057!2.50e-08!75;CL:0000359!9.55e-08!32;CL:0000071!1.59e-07!18;CL:0002546!1.59e-07!18;CL:0002078!7.50e-07!44 | |ontology_enrichment_celltype=CL:0000222!1.10e-14!119;CL:0000220!3.04e-14!246;CL:0000066!3.86e-14!254;CL:0000076!4.19e-14!62;CL:0002321!9.60e-14!248;CL:0000213!1.52e-12!57;CL:0000215!1.52e-12!57;CL:0002139!2.83e-11!24;CL:0000055!9.62e-10!180;CL:0000057!2.50e-08!75;CL:0000359!9.55e-08!32;CL:0000071!1.59e-07!18;CL:0002546!1.59e-07!18;CL:0002078!7.50e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.34e-16;24!CL:0000071;2.17e-10;18!CL:0000115;5.57e-09;36!CL:0000213;1.05e-08;58!CL:0000215;1.05e-08;58!CL:0002078;5.73e-08;45!CL:0000076;2.72e-07;63!CL:0002138;2.87e-07;6!CL:0002368;4.15e-07;13!CL:0000153;9.71e-07;9!CL:0000447;9.71e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.91e-16,24;CL:0000213,1.12e-15,58;CL:0000215,1.12e-15,58;CL:0000066,6.61e-15,253;CL:0002321,1.58e-13,250;CL:0000076,1.77e-12,63;CL:0002078,4.85e-11,45;CL:0000115,6.80e-11,36;CL:0000071,1.00e-10,18;CL:0002546,1.00e-10,18;CL:0000222,1.08e-10,121;CL:0000057,2.44e-10,76;CL:0002076,1.68e-07,42;CL:0005020,2.79e-07,6;CL:0002138,2.79e-07,6;CL:0005022,2.79e-07,6;CL:0002368,2.94e-07,13;CL:0000153,6.02e-07,9;CL:0000447,6.02e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;2.17e-10;18!CL:0005022;2.87e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.17e-18!84;UBERON:0002049!3.85e-18!79;UBERON:0007798!3.85e-18!79;UBERON:0000477!8.46e-18!286;UBERON:0000055!3.58e-16!69;UBERON:0001981!1.46e-14!60;UBERON:0007500!1.46e-14!60;UBERON:0004537!1.46e-14!60;UBERON:0006965!1.46e-14!60;UBERON:0004111!3.56e-14!241;UBERON:0004535!7.81e-14!110;UBERON:0001009!8.80e-14!113;UBERON:0000483!4.91e-13!309;UBERON:0000119!2.13e-12!312;UBERON:0001637!5.63e-12!42;UBERON:0003509!5.63e-12!42;UBERON:0004572!5.63e-12!42;UBERON:0003914!6.71e-12!118;UBERON:0000475!7.55e-12!365;UBERON:0000468!5.95e-11!659;UBERON:0000467!9.73e-11!625;UBERON:0000490!1.24e-10!138;UBERON:0000480!1.43e-10!626;UBERON:0006914!1.46e-09!25;UBERON:0004573!3.63e-09!33;UBERON:0004571!3.63e-09!33;UBERON:0000025!1.30e-08!194;UBERON:0000487!5.96e-08!22;UBERON:0001986!1.59e-07!18;UBERON:0004638!1.59e-07!18;UBERON:0004852!1.59e-07!18;UBERON:0004923!1.59e-07!57;UBERON:0000064!2.44e-07!219;UBERON:0000481!5.65e-07!347 | |ontology_enrichment_uberon=UBERON:0004872!1.17e-18!84;UBERON:0002049!3.85e-18!79;UBERON:0007798!3.85e-18!79;UBERON:0000477!8.46e-18!286;UBERON:0000055!3.58e-16!69;UBERON:0001981!1.46e-14!60;UBERON:0007500!1.46e-14!60;UBERON:0004537!1.46e-14!60;UBERON:0006965!1.46e-14!60;UBERON:0004111!3.56e-14!241;UBERON:0004535!7.81e-14!110;UBERON:0001009!8.80e-14!113;UBERON:0000483!4.91e-13!309;UBERON:0000119!2.13e-12!312;UBERON:0001637!5.63e-12!42;UBERON:0003509!5.63e-12!42;UBERON:0004572!5.63e-12!42;UBERON:0003914!6.71e-12!118;UBERON:0000475!7.55e-12!365;UBERON:0000468!5.95e-11!659;UBERON:0000467!9.73e-11!625;UBERON:0000490!1.24e-10!138;UBERON:0000480!1.43e-10!626;UBERON:0006914!1.46e-09!25;UBERON:0004573!3.63e-09!33;UBERON:0004571!3.63e-09!33;UBERON:0000025!1.30e-08!194;UBERON:0000487!5.96e-08!22;UBERON:0001986!1.59e-07!18;UBERON:0004638!1.59e-07!18;UBERON:0004852!1.59e-07!18;UBERON:0004923!1.59e-07!57;UBERON:0000064!2.44e-07!219;UBERON:0000481!5.65e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0006914;7.93e-13;25!UBERON:0000487;1.48e-10;22!UBERON:0004638;2.17e-10;18!UBERON:0001986;2.17e-10;18!UBERON:0004852;2.17e-10;18!UBERON:0000490;1.07e-09;33!UBERON:0004457;2.18e-09;9!UBERON:0000042;2.18e-09;9!UBERON:0000055;2.47e-09;65!UBERON:0007500;1.35e-08;56!UBERON:0001981;1.35e-08;56!UBERON:0004537;1.35e-08;56!UBERON:0002049;4.93e-08;75!UBERON:0007798;4.93e-08;75!UBERON:0001637;9.94e-08;42!UBERON:0003509;9.94e-08;42!UBERON:0004572;9.94e-08;42!UBERON:0003688;5.77e-07;6!UBERON:0002358;5.77e-07;6!UBERON:0003684;5.77e-07;6!UBERON:0001178;5.77e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.72e-16,78;UBERON:0007798,2.72e-16,78;UBERON:0004872,2.78e-15,83;UBERON:0000055,2.04e-14,68;UBERON:0004535,5.15e-14,109;UBERON:0001009,8.95e-14,112;UBERON:0006914,3.85e-13,25;UBERON:0007500,1.36e-11,59;UBERON:0001981,1.36e-11,59;UBERON:0004537,1.36e-11,59;UBERON:0006965,1.36e-11,59;UBERON:0000487,7.71e-11,22;UBERON:0004638,1.00e-10,18;UBERON:0001986,1.00e-10,18;UBERON:0004852,1.00e-10,18;UBERON:0003914,1.44e-10,117;UBERON:0001637,3.01e-09,42;UBERON:0003509,3.01e-09,42;UBERON:0004572,3.01e-09,42;UBERON:0004111,3.36e-07,240;UBERON:0004573,6.62e-07,33;UBERON:0004571,6.62e-07,33;UBERON:0003688,6.77e-07,6;UBERON:0002358,6.77e-07,6;UBERON:0003684,6.77e-07,6;UBERON:0001178,6.77e-07,6 | |||
|phase1_expression=4.72363786103447,1.2846031433459,5.21531295155093,3.00219895059391,3.5756887554183,13.0850778615055,0,0,0.522371256399677,0.491467873003018,1.39560233594486,2.83973783769224,1.31883489114227,0.866364470720326,0.994192127183747,0.672325146451775,0.602694528023977,0.730310090387373,1.46379839637152,0.246242116153576,1.42800483870977,0.626909442956176,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0,2.75826367343678,1.8072355126695,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,4.09160197899297,11.2046137239216,11.0294340339896,14.4846518960824,1.5905718941022,1.94653948121054,1.32348744029695,1.33037638477538,1.84453049955565,0.523916301990851,1.09288586487763,0.741568885568859,0,0,0,0,0,0,1.59009925893364,0,3.12426451446835,3.95715559346807,2.93649605346934,1.92582629358047,2.92592953151535,7.23566925674121,4.98072767761394,11.7152214467635,5.23678112241891,3.04108842287405,4.88124115096339,5.51494620518803,2.43042584364528,3.12549048994279,3.14341121676638,1.80178368773316,3.06633274931766,0,2.5648244150257,0,0,1.3082821564276,2.48485975847659,5.95163404823525,6.09082231740807,13.1944845544454,2.83734705758686,6.16745360156538,1.06748995729705,3.20667812942308,6.84664277879486,1.48181739276657,2.12500474047496,1.36221684880438,0.576175924479999,0,0,0.570471821544449,0.149448680551801,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,4.53728732640084,4.48474089222155,5.76604949810132,2.11931901159562,3.60109315301283,3.19462840639161,0.772921620136887,0.558350568994769,1.85653965465393,1.65642908774038,5.04867548488229,3.12969655383818,2.90962902273861,3.19508633264953,1.81353776809752,0.339121184620975,1.93260853163297,1.36373060295417,1.14721838155602,0,0,0,0.10366105501537,0,0,0,0,0,0,0,1.18306800039844,1.18009283054671,1.20505514941741,1.21323370005633,0.653638332277218,0.949082476444386,1.07865046528132,0.588664395376038,0,0,0,1.2347220339942,0,0,0,0,0,0,1.3725424823882,2.08525542276389,0,0.603173834469785,2.87024179991442,0.325808305310325,0,2.88662684050547,0.695582429850461,3.40485213283883,4.33099343283221,3.24089858803628,8.56143685055692,0.790204397959275,0,0,0,0,1.87467667973554,4.36753533317035,0.708875486211932,2.32852159027406,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0.266422179016099,3.57444984145369,0,0,0,1.77695974371273,2.37585561880029,0.602878754119172,0.871533458600294,1.09970290300263,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,1.34960640891054,0,0,2.28767947683888,1.42743191037729,1.89242898040722,1.28855556491985,0.902838299183157,2.27407504055985,0,0.664225598535437,0.184369168541703,0.60818530127658,0,0,0,0,0,2.12189300012382,6.65741758041988,0.907170879989041,6.20269519546942,11.6631099698927,5.05188169979532,5.12556597022804,6.14048698880044,5.30817939773905,11.8734453155993,0,0.532685175939381,0.0821271560138091,0,0,0,4.0101294060657,1.01289087829486,0.803701137152247,0,0.393373244878272,0.451199612907412,0.385076685522074,0,0,0.211103257785751,0,1.19065593693561,2.37507507712353,0,0,0,0,0,0,0,0,0.512900250232778,0.984043937099117,1.95227036798582,1.13345112812495,0,0,1.72279661398852,1.30012049207304,12.8547143875328,0,0.308097234229289,0.15350367472613,0,0.751941714077915,0.725083469571143,0.170453254832202,0.0890320356467374,4.95854746082934,3.2672311452068,4.72167036229961,1.31505115112215,0.464845549297286,5.35180989612088,0,0.924100740528266,0.532306030317022,0,0.37064843820784,2.00374841438788,0.372158369359667,2.21465597303108,6.48142659341004,0,0.855877976067841,1.27281299170375,0.78494864019923,0.899362287916574,0,1.17812402345686,1.2130948894399,3.17020642346017,0.421258456238981,0.48763373908959,3.41198885483798,3.16950440270266,0,0.989838023675989,1.13008116620243,1.10273068709225,7.29782872765342,8.33056681982149,0,0,1.62328301570163,0.6196469961995,0.845086807596724,0.717056761020258,1.8667317792493,1.426684205925,0,15.6219650120271,7.90307743103764,0,0,3.56021817084395,2.01090682660736,3.26672954583968,1.22386941009813,0.43050537267123,0,1.7737206141467,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,8.11731248108146,3.26661148915902,15.9723565091601,0,0.281338832821026,2.33748280548102,0,0,0.597743964753209,0.276283915531148,0,4.70435939509912,0,0.622079175323615,1.43789361835723,0,0,0.295930216910801,0,2.22273980289274,0.969332746095218,0,0,0.520855522170466,0,0,4.43794448313449,4.06805840468426,0,0,0,0,1.77148277162768,0.120596438625408,0,0.110579259931225,0,0.219385397153973,1.41620002574687,27.7453251114421,0.307801034015188,2.96249345202203,0,0,0,1.5950057986596,0,3.19820865611181,0,0,0,0,0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| ||
|short_description=p3@EFEMP1 | |short_description=p3@EFEMP1 | ||
}} | }} |
Latest revision as of 18:21, 17 September 2015
Short description: | p3@EFEMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EFEMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -243bp_to_ENST00000394554, uc002rzh.2_5end |
EntrezGene: | EFEMP1 |
HGNC: | 3218 |
UniProt: | Q12805 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.91e-16 | 24 |
lining cell | 1.12e-15 | 58 |
barrier cell | 1.12e-15 | 58 |
epithelial cell | 6.61e-15 | 253 |
embryonic cell | 1.58e-13 | 250 |
squamous epithelial cell | 1.77e-12 | 63 |
meso-epithelial cell | 4.85e-11 | 45 |
endothelial cell | 6.80e-11 | 36 |
blood vessel endothelial cell | 1.00e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.00e-10 | 18 |
mesodermal cell | 1.08e-10 | 121 |
fibroblast | 2.44e-10 | 76 |
endo-epithelial cell | 1.68e-07 | 42 |
lymphangioblast | 2.79e-07 | 6 |
endothelial cell of lymphatic vessel | 2.79e-07 | 6 |
vascular lymphangioblast | 2.79e-07 | 6 |
respiratory epithelial cell | 2.94e-07 | 13 |
GAG secreting cell | 6.02e-07 | 9 |
carbohydrate secreting cell | 6.02e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.72e-16 | 78 |
vascular system | 2.72e-16 | 78 |
splanchnic layer of lateral plate mesoderm | 2.78e-15 | 83 |
vessel | 2.04e-14 | 68 |
cardiovascular system | 5.15e-14 | 109 |
circulatory system | 8.95e-14 | 112 |
squamous epithelium | 3.85e-13 | 25 |
epithelial tube open at both ends | 1.36e-11 | 59 |
blood vessel | 1.36e-11 | 59 |
blood vasculature | 1.36e-11 | 59 |
vascular cord | 1.36e-11 | 59 |
simple squamous epithelium | 7.71e-11 | 22 |
blood vessel endothelium | 1.00e-10 | 18 |
endothelium | 1.00e-10 | 18 |
cardiovascular system endothelium | 1.00e-10 | 18 |
epithelial tube | 1.44e-10 | 117 |
artery | 3.01e-09 | 42 |
arterial blood vessel | 3.01e-09 | 42 |
arterial system | 3.01e-09 | 42 |
anatomical conduit | 3.36e-07 | 240 |
systemic artery | 6.62e-07 | 33 |
systemic arterial system | 6.62e-07 | 33 |
omentum | 6.77e-07 | 6 |
peritoneum | 6.77e-07 | 6 |
abdominal cavity | 6.77e-07 | 6 |
visceral peritoneum | 6.77e-07 | 6 |