FFCP PHASE1:Hg19::chr17:75316336..75316406,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UHD8 | |||
|association_with_transcript=0bp_to_BC021192_5end | |||
|cluster_id=chr17:75316336..75316406,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_5_at_SEPT9_5end | |||
|id=chr17:75316336..75316406,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.89e-46!180;CL:0000057!2.91e-27!75;CL:0000048!8.78e-27!430;CL:0000723!9.58e-26!436;CL:0000034!4.72e-23!444;CL:0000183!7.06e-19!59;CL:0000680!1.56e-18!57;CL:0000056!1.56e-18!57;CL:0000355!1.56e-18!57;CL:0000187!5.45e-18!54;CL:0002371!4.69e-17!591;CL:0002320!4.13e-16!365;CL:0000192!4.03e-15!42;CL:0000514!4.03e-15!42;CL:0000219!3.59e-14!390;CL:0000134!9.08e-14!358;CL:0000144!1.34e-13!625;CL:0000393!1.84e-13!60;CL:0000211!1.84e-13!60;CL:0002620!2.64e-12!23;CL:0000359!1.23e-11!32;CL:0000548!3.72e-08!679;CL:0000004!3.72e-08!679;CL:0000255!3.72e-08!679;CL:0000012!1.58e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.20e-13;23!CL:0000057;1.88e-12;73!CL:0000192;4.82e-12;43!CL:0000359;1.01e-11;32!CL:0000187;2.63e-11;55!CL:0000134;6.64e-11;55!CL:0002320;2.70e-10;188!CL:0000723;2.02e-09;61!CL:0000048;3.92e-09;58!CL:0000393;6.71e-09;61!CL:0000211;6.71e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.87e-32,427;CL:0000723,1.60e-30,433;CL:0000057,6.06e-30,76;CL:0000034,5.96e-28,441;CL:0000680,1.60e-20,58;CL:0000056,1.60e-20,58;CL:0000355,1.60e-20,58;CL:0000187,6.17e-20,55;CL:0002320,1.29e-19,361;CL:0000219,3.13e-17,386;CL:0000134,6.63e-17,354;CL:0000192,1.16e-16,43;CL:0000514,1.16e-16,43;CL:0000393,1.87e-15,61;CL:0000211,1.87e-15,61;CL:0002620,3.59e-13,23;CL:0000359,1.89e-12,32;CL:0000222,8.31e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;4.82e-12;43!CL:0000355;2.04e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.79e-25!83;UBERON:0002329!2.79e-25!83;UBERON:0003077!2.79e-25!83;UBERON:0003059!2.79e-25!83;UBERON:0007282!2.79e-25!83;UBERON:0009618!2.79e-25!83;UBERON:0007285!2.79e-25!83;UBERON:0004290!5.62e-23!70;UBERON:0000486!3.06e-18!82;UBERON:0001134!7.75e-18!61;UBERON:0002036!7.75e-18!61;UBERON:0003082!7.75e-18!61;UBERON:0002204!8.36e-18!167;UBERON:0002385!1.40e-17!63;UBERON:0001015!1.40e-17!63;UBERON:0000383!1.40e-17!63;UBERON:0002384!6.30e-17!375;UBERON:0002199!5.94e-14!45;UBERON:0002416!5.94e-14!45;UBERON:0005256!1.66e-13!143;UBERON:0003102!2.44e-13!95;UBERON:0002097!7.33e-12!40;UBERON:0000479!7.44e-08!787;UBERON:0000926!9.71e-08!448;UBERON:0004120!9.71e-08!448;UBERON:0006603!9.71e-08!448;UBERON:0001013!4.31e-07!14;UBERON:0002067!6.42e-07!9;UBERON:0004016!6.42e-07!9;UBERON:0010083!6.42e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.91e-10;41!UBERON:0003102;6.35e-10;50!UBERON:0002384;7.06e-10;198!UBERON:0002199;1.80e-09;46!UBERON:0002416;1.80e-09;46!UBERON:0002204;1.22e-07;70!UBERON:0001013;1.62e-07;14!UBERON:0002067;2.32e-07;9!UBERON:0002385;3.34e-07;31!UBERON:0001015;3.34e-07;31!UBERON:0000383;3.34e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,5.64e-25,71;UBERON:0003059,5.64e-25,71;UBERON:0007282,5.64e-25,71;UBERON:0004290,5.64e-25,71;UBERON:0009618,5.64e-25,71;UBERON:0007524,8.20e-25,73;UBERON:0003077,1.10e-24,72;UBERON:0007285,1.10e-24,72;UBERON:0007503,1.65e-23,78;UBERON:0002204,8.62e-21,167;UBERON:0002384,1.03e-20,371;UBERON:0000486,7.83e-20,83;UBERON:0001134,2.06e-19,62;UBERON:0002036,2.06e-19,62;UBERON:0003082,2.06e-19,62;UBERON:0002385,8.13e-19,64;UBERON:0001015,8.13e-19,64;UBERON:0000383,8.13e-19,64;UBERON:0002199,1.82e-15,46;UBERON:0002416,1.82e-15,46;UBERON:0000926,5.28e-15,315;UBERON:0004120,5.28e-15,315;UBERON:0006603,5.28e-15,315;UBERON:0005256,5.61e-14,122;UBERON:0002097,3.40e-13,41;UBERON:0003102,9.45e-13,99;UBERON:0003104,1.58e-11,160;UBERON:0009142,1.58e-11,160;UBERON:0000479,6.80e-08,773;UBERON:0001013,1.53e-07,14;UBERON:0002067,2.36e-07,9;UBERON:0004016,2.36e-07,9;UBERON:0010083,2.36e-07,9;UBERON:0001637,7.83e-07,42;UBERON:0003509,7.83e-07,42;UBERON:0004572,7.83e-07,42 | |||
|phase1_expression=17.2594460307029,16.9139413873877,17.6193005119964,7.00513088471913,10.2801051718276,5.23403114460221,12.6649939084155,32.8494334181952,19.8501077431877,0.245733936501509,0.697801167972428,8.73765488520689,9.49561121622433,28.7137938867308,31.482750694152,22.1867298329086,15.0673632005994,11.684961446198,14.1500511649247,0.61560529038394,0.204000691244253,0.626909442956176,0.572471974262113,0.273748850145768,2.25976751270645,3.05653622991805,2.46301768349837,3.69940672174292,0.393364276848904,0,2.16742572642506,0,0,0,0,0,0,0.553995408531877,1.00272223735071,0.217010870715852,6.94137970143765,9.71680998056939,6.69696475848885,3.05336301437086,1.88937971844405,3.63876091781724,2.32429036905685,2.05583944010913,4.02618282163635,2.58923153089935,2.56160706529101,2.36482229888585,2.41321976515633,0.645484683583826,2.70852973188684,3.9530891303947,3.547779950752,3.59557575112135,2.44867113896722,3.53021929783703,4.47535988059329,1.9791078011203,2.79249120670285,4.68847225585964,4.35313857942876,4.53908179752912,5.60540024096017,4.01997864410789,4.17186334736161,1.52032191293582,0.605399502633369,1.47311054395026,1.89877432464531,0,0,0.419317291016752,0.22465726229299,0,0.32145117339416,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8187552945358,11.4019146149618,6.39312809217652,22.0477882954585,40.1070328508712,18.8300474649071,7.15757352345989,25.3050132557371,0.283604451492204,0.886917589850256,0.614843499851882,2.22664428346111,1.09288586487763,2.22470665670658,2.92092654289215,2.61194605948901,6.64789802594326,0,0,0,0,7.74211135595512,0.347140501607594,0,0,0,0.208994966536811,0,1.42306505074684,0.66944122552934,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0.872188104285069,11.9273268406876,7.85109172320394,7.67973248716669,12.6208113129478,15.9600771989261,7.8494864019923,8.5399196583764,6.166688710429,15.8717628053881,10.5074324214357,7.35578564010564,27.8497666866674,30.5373239974399,21.5575717287093,33.7132882976746,61.6109567268005,55.2960118041664,30.2981006500913,38.3638878152472,43.3992992709948,37.9726758534101,28.8660645682655,60.1356046442955,53.4601285776924,36.3482386039479,50.0588749065915,51.0218880689529,26.5971060047425,36.7848448423575,43.4990661310167,42.5808292254413,48.4250717362451,28.9959453689732,4.76415169272088,25.2939386321295,33.9556248221522,32.8494446797321,28.5086541280182,47.4041634496819,41.4801269473463,40.7595915366182,18.0590675498155,18.2207199651441,35.340728394176,46.8533984089304,21.9838637273584,20.9455659584802,19.4451549579346,23.9080435157788,0.386521706326594,0,0.573609190778008,0,0,0,0.414644220061482,0,0,61.0153176086282,30.8755650332585,42.821825619269,39.9356418107502,53.4190816435493,2.36613600079688,2.69735504124963,4.33819853790268,2.75734931830985,2.39667388501647,2.13543557199987,3.23595139584395,2.5508790466295,1.92373578473195,0.738155454624648,14.0241773803446,40.3342531104772,39.6923520740963,0,0,0,0,0,3.77449182656756,0.219500570817251,2.24803506515239,0.904760751704678,0.740707561268237,29.3227474779292,37.4376522700648,0,0.34779121492523,3.63966952131047,0.433099343283221,0.462985512576611,0.190254152234598,0,0,14.280586353069,21.9964009230883,19.6193134221121,0,0.335964256397719,0.425325291727159,0.179117045405697,0.871901815541886,1.15014803749563,0,0,1.65862492432618,2.16179930125442,3.7872730027914,105.152512947832,187.938305374673,403.228018402562,165.940272642024,102.210527747104,56.7648379325004,219.800526692915,31.1724414480103,15.2586024091648,17.7478651686699,6.85140093516222,160.945400633347,27.894990834348,10.1056484302251,14.5610411675913,50.1554379811177,24.1143524439573,33.5691945560285,9.43654758143774,32.0146747180951,32.10637313445,29.9677289550236,8.5294067698211,17.4229412045354,8.741741934728,3.48613383440118,7.89786630338251,19.4598049025905,13.5609414686674,21.0833939483032,17.7322393063771,17.2292903751171,0,11.7272858400739,11.3011977402711,6.62525563987614,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0.414415513436035,30.3047984546276,37.5127890794758,28.2115624647725,13.1021642764408,14.4527480925701,11.1968714674094,8.43418187947535,39.1229929646035,47.7555758517568,17.5904221197258,24.5763471458112,18.9900243597954,34.1452604859566,59.3277507112104,25.0494699381925,0.206768026122887,0.215714200818617,0.320182673410333,9.7000822862803,8.32177197552485,13.0027826131763,12.1572825831201,14.732349435654,12.6297042494883,11.7888017315245,11.2575594794675,6.4341568457443,7.42090332224955,37.3187459002426,28.5874377754135,31.4547007532889,23.366449313263,30.4471191565093,0,0,0,8.84071250867472,15.2956581125642,19.4064134139948,0.902399225814824,0.308061348417659,3.92174884588428,0,0.105551628892876,2.27466768141793,0.850468526382578,3.45465465763423,4.62681758070868,7.31555381368403,6.52196706011309,0,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0.656029291399411,0.976135183992909,0.9273691048295,10.62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| |||
|short_description=p5@SEPT9 | |||
}} |
Latest revision as of 18:21, 17 September 2015
Short description: | p5@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SEPT9_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 0bp_to_BC021192_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | Q9UHD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.87e-32 | 427 |
somatic stem cell | 1.60e-30 | 433 |
fibroblast | 6.06e-30 | 76 |
stem cell | 5.96e-28 | 441 |
muscle precursor cell | 1.60e-20 | 58 |
myoblast | 1.60e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.60e-20 | 58 |
muscle cell | 6.17e-20 | 55 |
connective tissue cell | 1.29e-19 | 361 |
motile cell | 3.13e-17 | 386 |
mesenchymal cell | 6.63e-17 | 354 |
smooth muscle cell | 1.16e-16 | 43 |
smooth muscle myoblast | 1.16e-16 | 43 |
electrically responsive cell | 1.87e-15 | 61 |
electrically active cell | 1.87e-15 | 61 |
skin fibroblast | 3.59e-13 | 23 |
vascular associated smooth muscle cell | 1.89e-12 | 32 |
mesodermal cell | 8.31e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
somite | 5.64e-25 | 71 |
presomitic mesoderm | 5.64e-25 | 71 |
presumptive segmental plate | 5.64e-25 | 71 |
dermomyotome | 5.64e-25 | 71 |
trunk paraxial mesoderm | 5.64e-25 | 71 |
dense mesenchyme tissue | 8.20e-25 | 73 |
paraxial mesoderm | 1.10e-24 | 72 |
presumptive paraxial mesoderm | 1.10e-24 | 72 |
epithelial vesicle | 1.65e-23 | 78 |
musculoskeletal system | 8.62e-21 | 167 |
connective tissue | 1.03e-20 | 371 |
multilaminar epithelium | 7.83e-20 | 83 |
skeletal muscle tissue | 2.06e-19 | 62 |
striated muscle tissue | 2.06e-19 | 62 |
myotome | 2.06e-19 | 62 |
muscle tissue | 8.13e-19 | 64 |
musculature | 8.13e-19 | 64 |
musculature of body | 8.13e-19 | 64 |
integument | 1.82e-15 | 46 |
integumental system | 1.82e-15 | 46 |
mesoderm | 5.28e-15 | 315 |
mesoderm-derived structure | 5.28e-15 | 315 |
presumptive mesoderm | 5.28e-15 | 315 |
trunk mesenchyme | 5.61e-14 | 122 |
skin of body | 3.40e-13 | 41 |
surface structure | 9.45e-13 | 99 |
mesenchyme | 1.58e-11 | 160 |
entire embryonic mesenchyme | 1.58e-11 | 160 |
tissue | 6.80e-08 | 773 |
adipose tissue | 1.53e-07 | 14 |
dermis | 2.36e-07 | 9 |
dermatome | 2.36e-07 | 9 |
future dermis | 2.36e-07 | 9 |
artery | 7.83e-07 | 42 |
arterial blood vessel | 7.83e-07 | 42 |
arterial system | 7.83e-07 | 42 |