FFCP PHASE1:Hg19::chr16:71560178..71560189,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10164 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1972 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NCG5 | |||
|association_with_transcript=24bp_to_ENST00000539698,NM_001166395_5end | |||
|cluster_id=chr16:71560178..71560189,+ | |||
|coexpression_cluster_id=C346 | |||
|description=CAGE_peak_4_at_CHST4_5end | |||
|id=chr16:71560178..71560189,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.35e-18!5;CL:0000039!1.15e-07!7;CL:0000586!1.15e-07!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.84e-34;1!UBERON:0004161;4.80e-13;11!UBERON:0009497;3.38e-11;13 | |||
|ontology_enrichment_disease=DOID:74!1.87e-12!2;DOID:2355!2.36e-07!1;DOID:630!5.69e-07!1;DOID:0050177!5.69e-07!1;DOID:0050427!5.69e-07!1;DOID:225!8.98e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:2355;3.05e-34;1!DOID:74;7.05e-18;2!DOID:1287;1.27e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.61e-34,1;DOID:74,7.67e-18,2;DOID:1287,1.32e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001154!6.02e-07!1;UBERON:0001153!6.02e-07!1;UBERON:0000473!7.27e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.23e-12;25!UBERON:0002110;1.85e-12;3!UBERON:0002075;2.13e-08;18!UBERON:0002107;6.59e-08;19!UBERON:0006925;6.59e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.18e-12,25;UBERON:0000015,1.18e-12,25;UBERON:0002423,1.18e-12,25;UBERON:0006235,1.18e-12,25;UBERON:0004161,1.18e-12,25;UBERON:0002110,1.85e-12,3;UBERON:0006242,1.85e-12,3;UBERON:0002075,2.09e-08,18;UBERON:0002107,6.36e-08,19;UBERON:0006925,6.36e-08,19;UBERON:0008836,6.36e-08,19;UBERON:0000949,2.44e-07,45;UBERON:0008835,5.74e-07,22;UBERON:0003894,5.74e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.265059536642971,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60538476327087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2015066337104,0,0,0,0.412618309791701,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,2.34454203369928,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.383287282918786,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599646935549574,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.509944148709909,0,0,0.250707539292375,0,0.267964130156178,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0,0.358611026963382,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p4@CHST4 | |||
}} |
Latest revision as of 17:42, 17 September 2015
Short description: | p4@CHST4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHST4_5end |
Coexpression cluster: | C346_gall_ductus_seminal_temporal_duodenum_Hepatocyte_liver |
Association with transcript: | 24bp_to_ENST00000539698, NM_001166395_5end |
EntrezGene: | CHST4 |
HGNC: | 1972 |
UniProt: | Q8NCG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.18e-12 | 25 |
anatomical boundary | 1.18e-12 | 25 |
hepatobiliary system | 1.18e-12 | 25 |
foregut-midgut junction | 1.18e-12 | 25 |
septum transversum | 1.18e-12 | 25 |
gallbladder | 1.85e-12 | 3 |
gall bladder primordium | 1.85e-12 | 3 |
viscus | 2.09e-08 | 18 |
liver | 6.36e-08 | 19 |
digestive gland | 6.36e-08 | 19 |
liver bud | 6.36e-08 | 19 |
endocrine system | 2.44e-07 | 45 |
hepatic diverticulum | 5.74e-07 | 22 |
liver primordium | 5.74e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.61e-34 | 1 |
hematopoietic system disease | 7.67e-18 | 2 |
cardiovascular system disease | 1.32e-09 | 4 |